Skyline document import - LINCS_GCP_Plate30_annotated_minimized_2018-05-07_16-32-39.sky.zip

GCP

Job Status

Created: 2019-06-27 14:12:36
Modified: 2020-06-01 17:07:59
Email: karen@broadinstitute.org
Status: COMPLETE
Info:
Description: Skyline document import - LINCS_GCP_Plate30_annotated_minimized_2018-05-07_16-32-39.sky.zip
File Path: /data/labkey/files/LINCS/Publications/Touchstone_2/GCP/@files/LINCS_GCP_Plate30_annotated_minimized_2018-05-07_16-32-39.sky_2019-06-27_14-12-58.log
Files: LINCS_GCP_Plate30_annotated_minimized_2018-05-07_16-32-39.sky_2019-06-27_14-12-58.log
Completed Runs: LINCS_GCP_Plate30_annotated_minimized_2018-05-07_16-32-39.sky.zip

Log File


27 Jun 2019 14:31:52,460 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
27 Jun 2019 14:31:55,952 INFO : Created temp file because input is from cloud: s3://s3.amazonaws.com/mc-panoramaweb/container5511/LINCS_GCP_Plate30_annotated_minimized_2018-05-07_16-32-39.sky.zip
27 Jun 2019 14:31:55,955 INFO : Starting to import Skyline document from LINCS_GCP_Plate30_annotated_minimized_2018-05-07_16-32-39.sky.zip
27 Jun 2019 14:31:55,955 INFO : Expanding Histone2013.blib
27 Jun 2019 14:31:55,958 INFO : Expanding Histone2013.redundant.blib
27 Jun 2019 14:31:55,960 INFO : Expanding LINCS_GCP_Plate30_annotated_minimized.skyd
27 Jun 2019 14:31:57,739 INFO : Expanding LINCS_GCP_Plate30_annotated_minimized.sky
27 Jun 2019 14:31:57,821 WARN : The version of this Skyline document is 4.11. This is newer than the highest supported version 4.1
27 Jun 2019 14:31:58,910 INFO : Inserting H3K4me0 - BI10003
27 Jun 2019 14:31:59,917 INFO : Total peptides inserted: 1
27 Jun 2019 14:31:59,917 INFO : Inserting H3K4me1 - BI10004
27 Jun 2019 14:32:00,862 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:00,863 INFO : Inserting H3K4me2 - BI10005
27 Jun 2019 14:32:02,369 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:02,370 INFO : Inserting H3K4me3 - BI10006
27 Jun 2019 14:32:04,576 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:04,576 INFO : Inserting H3K4ac1 - BI10007
27 Jun 2019 14:32:05,544 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:05,545 INFO : Inserting H3K9me0K14ac0 - BI10008
27 Jun 2019 14:32:06,919 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:06,920 INFO : Inserting H3K9me1K14ac0 - BI10009
27 Jun 2019 14:32:08,207 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:08,207 INFO : Inserting H3K9me2K14ac0 - BI10010
27 Jun 2019 14:32:09,468 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:09,468 INFO : Inserting H3K9me3K14ac0 - BI10011
27 Jun 2019 14:32:10,770 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:10,770 INFO : Inserting H3K9ac1K14ac0 - BI10012
27 Jun 2019 14:32:12,005 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:12,005 INFO : Inserting H3K9me0K14ac1 - BI10013
27 Jun 2019 14:32:13,224 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:13,225 INFO : Inserting H3K9me1K14ac1 - BI10014
27 Jun 2019 14:32:14,336 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:14,337 INFO : Inserting H3K9me2K14ac1 - BI10015
27 Jun 2019 14:32:15,516 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:15,516 INFO : Inserting H3K9me3K14ac1 - BI10016
27 Jun 2019 14:32:16,692 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:16,693 INFO : Inserting H3K9ac1K14ac1 - BI10017
27 Jun 2019 14:32:17,808 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:17,808 INFO : Inserting H3K9me0S10ph1K14ac0 - BI10018
27 Jun 2019 14:32:18,797 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:18,798 INFO : Inserting H3K9me1S10ph1K14ac0 - BI10019
27 Jun 2019 14:32:19,960 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:19,961 INFO : Inserting H3K9me2S10ph1K14ac0 - BI10020
27 Jun 2019 14:32:21,193 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:21,194 INFO : Inserting H3K9me3S10ph1K14ac0 - BI10021
27 Jun 2019 14:32:22,305 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:22,305 INFO : Inserting H3K9ac1S10ph1K14ac0 - BI10022
27 Jun 2019 14:32:23,440 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:23,441 INFO : Inserting H3K9me0S10ph1K14ac1 - BI10023
27 Jun 2019 14:32:24,389 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:24,390 INFO : Inserting H3K9me1S10ph1K14ac1 - BI10024
27 Jun 2019 14:32:25,307 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:25,307 INFO : Inserting H3K9me2S10ph1K14ac1 - BI10025
27 Jun 2019 14:32:26,358 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:26,358 INFO : Inserting H3K9me3S10ph1K14ac1 - BI10026
27 Jun 2019 14:32:27,515 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:27,515 INFO : Inserting H3K9ac1S10ph1K14ac1 - BI10027
27 Jun 2019 14:32:28,634 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:28,634 INFO : Inserting H3K18ac0K23ac0 - BI10028
27 Jun 2019 14:32:29,686 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:29,686 INFO : Inserting H3K18ac1K23ac0 - BI10029
27 Jun 2019 14:32:30,604 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:30,605 INFO : Inserting H3K18ac0K23ac1 - BI10030
27 Jun 2019 14:32:31,612 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:31,612 INFO : Inserting H3K18ac1K23ac1 - BI10031
27 Jun 2019 14:32:32,571 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:32,572 INFO : Inserting H3K18ub1K23ac0 - BI10032
27 Jun 2019 14:32:33,935 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:33,936 INFO : Inserting H3K18ac0K23ub1 - BI10033
27 Jun 2019 14:32:35,153 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:35,154 INFO : Inserting H3K27me0K36me0 - BI10034
27 Jun 2019 14:32:36,848 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:36,848 INFO : Inserting H3K27me0K36me1 - BI10085
27 Jun 2019 14:32:38,183 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:38,184 INFO : Inserting H3K27me0K36me2 - BI10086
27 Jun 2019 14:32:39,171 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:39,172 INFO : Inserting H3K27me0K36me3 - BI10087
27 Jun 2019 14:32:40,129 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:40,129 INFO : Inserting H3K27me1K36me0 - BI10035
27 Jun 2019 14:32:41,918 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:41,919 INFO : Inserting H3K27me1K36me1 - BI10036
27 Jun 2019 14:32:43,165 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:43,166 INFO : Inserting H3K27me1K36me2 - BI10037
27 Jun 2019 14:32:44,201 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:44,202 INFO : Inserting H3K27me1K36me3 - BI10038
27 Jun 2019 14:32:45,206 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:45,207 INFO : Inserting H3K27me2K36me0 - BI10039
27 Jun 2019 14:32:46,257 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:46,258 INFO : Inserting H3K27me2K36me1 - BI10040
27 Jun 2019 14:32:47,531 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:47,531 INFO : Inserting H3K27me2K36me2 - BI10041
27 Jun 2019 14:32:49,093 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:49,093 INFO : Inserting H3K27me2K36me3 - BI10042
27 Jun 2019 14:32:50,250 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:50,251 INFO : Inserting H3K27me3K36me0 - BI10043
27 Jun 2019 14:32:51,266 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:51,266 INFO : Inserting H3K27me3K36me1 - BI10044
27 Jun 2019 14:32:52,631 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:52,632 INFO : Inserting H3K27me3K36me2 - BI10045
27 Jun 2019 14:32:54,155 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:54,156 INFO : Inserting H3K27me3K36me3 - BI10046
27 Jun 2019 14:32:55,963 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:55,964 INFO : Inserting H3K27ac1K36me0 - BI10047
27 Jun 2019 14:32:57,288 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:57,288 INFO : Inserting H3K27ac1K36me1 - BI10048
27 Jun 2019 14:32:58,731 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:58,732 INFO : Inserting H3K27ac1K36me2 - BI10049
27 Jun 2019 14:32:59,827 INFO : Total peptides inserted: 1
27 Jun 2019 14:32:59,828 INFO : Inserting H3K27ac1K36me3 - BI10050
27 Jun 2019 14:33:00,928 INFO : Total peptides inserted: 1
27 Jun 2019 14:33:00,929 INFO : Inserting H3.3K27me0K36me0 - BI10051
27 Jun 2019 14:33:01,952 INFO : Total peptides inserted: 1
27 Jun 2019 14:33:01,952 INFO : Inserting H3NORM(41-49) - BI10052
27 Jun 2019 14:33:03,679 INFO : Total peptides inserted: 1
27 Jun 2019 14:33:03,679 INFO : Inserting H3NORM(41-49) - BI10052p
27 Jun 2019 14:33:04,993 INFO : Total peptides inserted: 1
27 Jun 2019 14:33:04,993 INFO : Inserting H3K56me0 - BI10054
27 Jun 2019 14:33:06,263 INFO : Total peptides inserted: 1
27 Jun 2019 14:33:06,263 INFO : Inserting H3K56me1 - BI10055
27 Jun 2019 14:33:07,592 INFO : Total peptides inserted: 1
27 Jun 2019 14:33:07,592 INFO : Inserting H3K56me2 - BI10056
27 Jun 2019 14:33:08,655 INFO : Total peptides inserted: 1
27 Jun 2019 14:33:08,655 INFO : Inserting H3K79me0 - BI10060
27 Jun 2019 14:33:10,174 INFO : Total peptides inserted: 1
27 Jun 2019 14:33:10,174 INFO : Inserting H3K79me1 - BI10061
27 Jun 2019 14:33:11,622 INFO : Total peptides inserted: 1
27 Jun 2019 14:33:11,623 INFO : Inserting H3K79me2 - BI10062
27 Jun 2019 14:33:12,899 INFO : Total peptides inserted: 1
27 Jun 2019 14:33:23,827 INFO : Copied LINCS_GCP_Plate30_annotated_minimized.skyd to cloud storage.
27 Jun 2019 14:33:24,008 INFO : Copied Histone2013.blib to cloud storage.
27 Jun 2019 14:33:24,192 INFO : Copied Histone2013.redundant.blib to cloud storage.
27 Jun 2019 14:33:26,102 INFO : Completed import of Skyline document from LINCS_GCP_Plate30_annotated_minimized_2018-05-07_16-32-39.sky.zip
27 Jun 2019 14:33:26,246 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'