Skyline document import - LINCS_GCP_Plate24_annotated_minimized_2018-05-07_16-43-23.sky.zip

GCP

Job Status

Created: 2019-06-27 14:12:35
Modified: 2020-06-01 17:07:59
Email: karen@broadinstitute.org
Status: COMPLETE
Info:
Description: Skyline document import - LINCS_GCP_Plate24_annotated_minimized_2018-05-07_16-43-23.sky.zip
File Path: /data/labkey/files/LINCS/Publications/Touchstone_2/GCP/@files/LINCS_GCP_Plate24_annotated_minimized_2018-05-07_16-43-23.sky_2019-06-27_14-12-48.log
Files: LINCS_GCP_Plate24_annotated_minimized_2018-05-07_16-43-23.sky_2019-06-27_14-12-48.log
Completed Runs: LINCS_GCP_Plate24_annotated_minimized_2018-05-07_16-43-23.sky.zip

Log File


27 Jun 2019 14:24:24,488 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
27 Jun 2019 14:24:30,303 INFO : Created temp file because input is from cloud: s3://s3.amazonaws.com/mc-panoramaweb/container5511/LINCS_GCP_Plate24_annotated_minimized_2018-05-07_16-43-23.sky.zip
27 Jun 2019 14:24:30,307 INFO : Starting to import Skyline document from LINCS_GCP_Plate24_annotated_minimized_2018-05-07_16-43-23.sky.zip
27 Jun 2019 14:24:30,308 INFO : Expanding Histone2013.blib
27 Jun 2019 14:24:30,311 INFO : Expanding Histone2013.redundant.blib
27 Jun 2019 14:24:30,314 INFO : Expanding LINCS_GCP_Plate24_annotated_minimized.skyd
27 Jun 2019 14:24:32,503 INFO : Expanding LINCS_GCP_Plate24_annotated_minimized.sky
27 Jun 2019 14:24:32,574 WARN : The version of this Skyline document is 4.11. This is newer than the highest supported version 4.1
27 Jun 2019 14:24:34,170 INFO : Inserting H3K4me0 - BI10003
27 Jun 2019 14:24:35,157 INFO : Total peptides inserted: 1
27 Jun 2019 14:24:35,157 INFO : Inserting H3K4me1 - BI10004
27 Jun 2019 14:24:36,140 INFO : Total peptides inserted: 1
27 Jun 2019 14:24:36,140 INFO : Inserting H3K4me2 - BI10005
27 Jun 2019 14:24:37,711 INFO : Total peptides inserted: 1
27 Jun 2019 14:24:37,711 INFO : Inserting H3K4ac1 - BI10007
27 Jun 2019 14:24:38,538 INFO : Total peptides inserted: 1
27 Jun 2019 14:24:38,538 INFO : Inserting H3K9me0K14ac0 - BI10008
27 Jun 2019 14:24:39,681 INFO : Total peptides inserted: 1
27 Jun 2019 14:24:39,681 INFO : Inserting H3K9me1K14ac0 - BI10009
27 Jun 2019 14:24:40,864 INFO : Total peptides inserted: 1
27 Jun 2019 14:24:40,865 INFO : Inserting H3K9me2K14ac0 - BI10010
27 Jun 2019 14:24:41,996 INFO : Total peptides inserted: 1
27 Jun 2019 14:24:41,996 INFO : Inserting H3K9me3K14ac0 - BI10011
27 Jun 2019 14:24:43,118 INFO : Total peptides inserted: 1
27 Jun 2019 14:24:43,119 INFO : Inserting H3K9ac1K14ac0 - BI10012
27 Jun 2019 14:24:44,168 INFO : Total peptides inserted: 1
27 Jun 2019 14:24:44,168 INFO : Inserting H3K9me0K14ac1 - BI10013
27 Jun 2019 14:24:45,236 INFO : Total peptides inserted: 1
27 Jun 2019 14:24:45,236 INFO : Inserting H3K9me1K14ac1 - BI10014
27 Jun 2019 14:24:46,311 INFO : Total peptides inserted: 1
27 Jun 2019 14:24:46,311 INFO : Inserting H3K9me2K14ac1 - BI10015
27 Jun 2019 14:24:47,653 INFO : Total peptides inserted: 1
27 Jun 2019 14:24:47,653 INFO : Inserting H3K9me3K14ac1 - BI10016
27 Jun 2019 14:24:48,693 INFO : Total peptides inserted: 1
27 Jun 2019 14:24:48,693 INFO : Inserting H3K9ac1K14ac1 - BI10017
27 Jun 2019 14:24:49,745 INFO : Total peptides inserted: 1
27 Jun 2019 14:24:49,746 INFO : Inserting H3K9me0S10ph1K14ac0 - BI10018
27 Jun 2019 14:24:50,610 INFO : Total peptides inserted: 1
27 Jun 2019 14:24:50,611 INFO : Inserting H3K9me1S10ph1K14ac0 - BI10019
27 Jun 2019 14:24:51,652 INFO : Total peptides inserted: 1
27 Jun 2019 14:24:51,653 INFO : Inserting H3K9me2S10ph1K14ac0 - BI10020
27 Jun 2019 14:24:52,654 INFO : Total peptides inserted: 1
27 Jun 2019 14:24:52,654 INFO : Inserting H3K9me3S10ph1K14ac0 - BI10021
27 Jun 2019 14:24:53,601 INFO : Total peptides inserted: 1
27 Jun 2019 14:24:53,601 INFO : Inserting H3K9ac1S10ph1K14ac0 - BI10022
27 Jun 2019 14:24:54,650 INFO : Total peptides inserted: 1
27 Jun 2019 14:24:54,651 INFO : Inserting H3K9me0S10ph1K14ac1 - BI10023
27 Jun 2019 14:24:55,623 INFO : Total peptides inserted: 1
27 Jun 2019 14:24:55,623 INFO : Inserting H3K9me1S10ph1K14ac1 - BI10024
27 Jun 2019 14:24:56,660 INFO : Total peptides inserted: 1
27 Jun 2019 14:24:56,660 INFO : Inserting H3K9me2S10ph1K14ac1 - BI10025
27 Jun 2019 14:24:57,742 INFO : Total peptides inserted: 1
27 Jun 2019 14:24:57,743 INFO : Inserting H3K9me3S10ph1K14ac1 - BI10026
27 Jun 2019 14:24:58,915 INFO : Total peptides inserted: 1
27 Jun 2019 14:24:58,916 INFO : Inserting H3K9ac1S10ph1K14ac1 - BI10027
27 Jun 2019 14:25:00,057 INFO : Total peptides inserted: 1
27 Jun 2019 14:25:00,058 INFO : Inserting H3K18ac0K23ac0 - BI10028
27 Jun 2019 14:25:01,158 INFO : Total peptides inserted: 1
27 Jun 2019 14:25:01,159 INFO : Inserting H3K18ac1K23ac0 - BI10029
27 Jun 2019 14:25:02,077 INFO : Total peptides inserted: 1
27 Jun 2019 14:25:02,077 INFO : Inserting H3K18ac0K23ac1 - BI10030
27 Jun 2019 14:25:03,039 INFO : Total peptides inserted: 1
27 Jun 2019 14:25:03,040 INFO : Inserting H3K18ac1K23ac1 - BI10031
27 Jun 2019 14:25:03,911 INFO : Total peptides inserted: 1
27 Jun 2019 14:25:03,911 INFO : Inserting H3K18ub1K23ac0 - BI10032
27 Jun 2019 14:25:05,357 INFO : Total peptides inserted: 1
27 Jun 2019 14:25:05,358 INFO : Inserting H3K18ac0K23ub1 - BI10033
27 Jun 2019 14:25:06,475 INFO : Total peptides inserted: 1
27 Jun 2019 14:25:06,475 INFO : Inserting H3K27me0K36me0 - BI10034
27 Jun 2019 14:25:07,499 INFO : Total peptides inserted: 1
27 Jun 2019 14:25:07,499 INFO : Inserting H3K27me0K36me1 - BI10085
27 Jun 2019 14:25:08,714 INFO : Total peptides inserted: 1
27 Jun 2019 14:25:08,715 INFO : Inserting H3K27me0K36me2 - BI10086
27 Jun 2019 14:25:09,850 INFO : Total peptides inserted: 1
27 Jun 2019 14:25:09,850 INFO : Inserting H3K27me0K36me3 - BI10087
27 Jun 2019 14:25:11,005 INFO : Total peptides inserted: 1
27 Jun 2019 14:25:11,005 INFO : Inserting H3K27me1K36me0 - BI10035
27 Jun 2019 14:25:12,542 INFO : Total peptides inserted: 1
27 Jun 2019 14:25:12,542 INFO : Inserting H3K27me1K36me1 - BI10036
27 Jun 2019 14:25:13,625 INFO : Total peptides inserted: 1
27 Jun 2019 14:25:13,626 INFO : Inserting H3K27me1K36me2 - BI10037
27 Jun 2019 14:25:14,458 INFO : Total peptides inserted: 1
27 Jun 2019 14:25:14,459 INFO : Inserting H3K27me1K36me3 - BI10038
27 Jun 2019 14:25:15,325 INFO : Total peptides inserted: 1
27 Jun 2019 14:25:15,326 INFO : Inserting H3K27me2K36me0 - BI10039
27 Jun 2019 14:25:16,299 INFO : Total peptides inserted: 1
27 Jun 2019 14:25:16,299 INFO : Inserting H3K27me2K36me1 - BI10040
27 Jun 2019 14:25:17,227 INFO : Total peptides inserted: 1
27 Jun 2019 14:25:17,227 INFO : Inserting H3K27me2K36me2 - BI10041
27 Jun 2019 14:25:18,611 INFO : Total peptides inserted: 1
27 Jun 2019 14:25:18,611 INFO : Inserting H3K27me2K36me3 - BI10042
27 Jun 2019 14:25:19,617 INFO : Total peptides inserted: 1
27 Jun 2019 14:25:19,618 INFO : Inserting H3K27me3K36me0 - BI10043
27 Jun 2019 14:25:20,554 INFO : Total peptides inserted: 1
27 Jun 2019 14:25:20,555 INFO : Inserting H3K27me3K36me1 - BI10044
27 Jun 2019 14:25:21,815 INFO : Total peptides inserted: 1
27 Jun 2019 14:25:21,815 INFO : Inserting H3K27me3K36me2 - BI10045
27 Jun 2019 14:25:22,874 INFO : Total peptides inserted: 1
27 Jun 2019 14:25:22,875 INFO : Inserting H3K27me3K36me3 - BI10046
27 Jun 2019 14:25:24,497 INFO : Total peptides inserted: 1
27 Jun 2019 14:25:24,498 INFO : Inserting H3K27ac1K36me0 - BI10047
27 Jun 2019 14:25:25,765 INFO : Total peptides inserted: 1
27 Jun 2019 14:25:25,766 INFO : Inserting H3K27ac1K36me1 - BI10048
27 Jun 2019 14:25:27,129 INFO : Total peptides inserted: 1
27 Jun 2019 14:25:27,130 INFO : Inserting H3K27ac1K36me2 - BI10049
27 Jun 2019 14:25:28,233 INFO : Total peptides inserted: 1
27 Jun 2019 14:25:28,233 INFO : Inserting H3K27ac1K36me3 - BI10050
27 Jun 2019 14:25:29,281 INFO : Total peptides inserted: 1
27 Jun 2019 14:25:29,281 INFO : Inserting H3.3K27me0K36me0 - BI10051
27 Jun 2019 14:25:30,161 INFO : Total peptides inserted: 1
27 Jun 2019 14:25:30,161 INFO : Inserting H3NORM(41-49) - BI10052
27 Jun 2019 14:25:31,909 INFO : Total peptides inserted: 1
27 Jun 2019 14:25:31,909 INFO : Inserting H3NORM(41-49) - BI10052p
27 Jun 2019 14:25:33,856 INFO : Total peptides inserted: 1
27 Jun 2019 14:25:33,856 INFO : Inserting H3K56me0 - BI10054
27 Jun 2019 14:25:35,184 INFO : Total peptides inserted: 1
27 Jun 2019 14:25:35,185 INFO : Inserting H3K56me1 - BI10055
27 Jun 2019 14:25:36,395 INFO : Total peptides inserted: 1
27 Jun 2019 14:25:36,396 INFO : Inserting H3K56me2 - BI10056
27 Jun 2019 14:25:37,489 INFO : Total peptides inserted: 1
27 Jun 2019 14:25:37,490 INFO : Inserting H3K79me0 - BI10060
27 Jun 2019 14:25:38,946 INFO : Total peptides inserted: 1
27 Jun 2019 14:25:38,946 INFO : Inserting H3K79me1 - BI10061
27 Jun 2019 14:25:40,499 INFO : Total peptides inserted: 1
27 Jun 2019 14:25:40,499 INFO : Inserting H3K79me2 - BI10062
27 Jun 2019 14:25:41,789 INFO : Total peptides inserted: 1
27 Jun 2019 14:25:46,667 INFO : Copied LINCS_GCP_Plate24_annotated_minimized.skyd to cloud storage.
27 Jun 2019 14:25:46,813 INFO : Copied Histone2013.blib to cloud storage.
27 Jun 2019 14:25:46,972 INFO : Copied Histone2013.redundant.blib to cloud storage.
27 Jun 2019 14:25:49,018 INFO : Completed import of Skyline document from LINCS_GCP_Plate24_annotated_minimized_2018-05-07_16-43-23.sky.zip
27 Jun 2019 14:25:49,218 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'