Skyline document import - LINCS_GCP_Plate23_annotated_minimized_2018-05-07_14-31-53.sky.zip

GCP

Job Status

Created: 2019-06-27 14:12:35
Modified: 2020-06-01 17:07:59
Email: karen@broadinstitute.org
Status: COMPLETE
Info:
Description: Skyline document import - LINCS_GCP_Plate23_annotated_minimized_2018-05-07_14-31-53.sky.zip
File Path: /data/labkey/files/LINCS/Publications/Touchstone_2/GCP/@files/LINCS_GCP_Plate23_annotated_minimized_2018-05-07_14-31-53.sky_2019-06-27_14-12-46.log
Files: LINCS_GCP_Plate23_annotated_minimized_2018-05-07_14-31-53.sky_2019-06-27_14-12-46.log
Completed Runs: LINCS_GCP_Plate23_annotated_minimized_2018-05-07_14-31-53.sky.zip

Log File


27 Jun 2019 14:22:57,831 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
27 Jun 2019 14:23:01,909 INFO : Created temp file because input is from cloud: s3://s3.amazonaws.com/mc-panoramaweb/container5511/LINCS_GCP_Plate23_annotated_minimized_2018-05-07_14-31-53.sky.zip
27 Jun 2019 14:23:01,913 INFO : Starting to import Skyline document from LINCS_GCP_Plate23_annotated_minimized_2018-05-07_14-31-53.sky.zip
27 Jun 2019 14:23:01,914 INFO : Expanding Histone2013.blib
27 Jun 2019 14:23:01,917 INFO : Expanding Histone2013.redundant.blib
27 Jun 2019 14:23:01,920 INFO : Expanding LINCS_GCP_Plate23_annotated_minimized.skyd
27 Jun 2019 14:23:04,155 INFO : Expanding LINCS_GCP_Plate23_annotated_minimized.sky
27 Jun 2019 14:23:04,237 WARN : The version of this Skyline document is 4.11. This is newer than the highest supported version 4.1
27 Jun 2019 14:23:06,328 INFO : Inserting H3K4me0 - BI10003
27 Jun 2019 14:23:07,393 INFO : Total peptides inserted: 1
27 Jun 2019 14:23:07,393 INFO : Inserting H3K4me1 - BI10004
27 Jun 2019 14:23:08,333 INFO : Total peptides inserted: 1
27 Jun 2019 14:23:08,333 INFO : Inserting H3K4me2 - BI10005
27 Jun 2019 14:23:09,858 INFO : Total peptides inserted: 1
27 Jun 2019 14:23:09,858 INFO : Inserting H3K4ac1 - BI10007
27 Jun 2019 14:23:10,702 INFO : Total peptides inserted: 1
27 Jun 2019 14:23:10,702 INFO : Inserting H3K9me0K14ac0 - BI10008
27 Jun 2019 14:23:12,079 INFO : Total peptides inserted: 1
27 Jun 2019 14:23:12,079 INFO : Inserting H3K9me1K14ac0 - BI10009
27 Jun 2019 14:23:13,264 INFO : Total peptides inserted: 1
27 Jun 2019 14:23:13,265 INFO : Inserting H3K9me2K14ac0 - BI10010
27 Jun 2019 14:23:14,388 INFO : Total peptides inserted: 1
27 Jun 2019 14:23:14,388 INFO : Inserting H3K9me3K14ac0 - BI10011
27 Jun 2019 14:23:15,516 INFO : Total peptides inserted: 1
27 Jun 2019 14:23:15,517 INFO : Inserting H3K9ac1K14ac0 - BI10012
27 Jun 2019 14:23:16,593 INFO : Total peptides inserted: 1
27 Jun 2019 14:23:16,593 INFO : Inserting H3K9me0K14ac1 - BI10013
27 Jun 2019 14:23:17,693 INFO : Total peptides inserted: 1
27 Jun 2019 14:23:17,693 INFO : Inserting H3K9me1K14ac1 - BI10014
27 Jun 2019 14:23:18,773 INFO : Total peptides inserted: 1
27 Jun 2019 14:23:18,773 INFO : Inserting H3K9me2K14ac1 - BI10015
27 Jun 2019 14:23:19,937 INFO : Total peptides inserted: 1
27 Jun 2019 14:23:19,937 INFO : Inserting H3K9me3K14ac1 - BI10016
27 Jun 2019 14:23:21,073 INFO : Total peptides inserted: 1
27 Jun 2019 14:23:21,074 INFO : Inserting H3K9ac1K14ac1 - BI10017
27 Jun 2019 14:23:22,144 INFO : Total peptides inserted: 1
27 Jun 2019 14:23:22,144 INFO : Inserting H3K9me0S10ph1K14ac0 - BI10018
27 Jun 2019 14:23:23,243 INFO : Total peptides inserted: 1
27 Jun 2019 14:23:23,244 INFO : Inserting H3K9me1S10ph1K14ac0 - BI10019
27 Jun 2019 14:23:24,428 INFO : Total peptides inserted: 1
27 Jun 2019 14:23:24,428 INFO : Inserting H3K9me2S10ph1K14ac0 - BI10020
27 Jun 2019 14:23:25,633 INFO : Total peptides inserted: 1
27 Jun 2019 14:23:25,634 INFO : Inserting H3K9me3S10ph1K14ac0 - BI10021
27 Jun 2019 14:23:26,752 INFO : Total peptides inserted: 1
27 Jun 2019 14:23:26,752 INFO : Inserting H3K9ac1S10ph1K14ac0 - BI10022
27 Jun 2019 14:23:27,998 INFO : Total peptides inserted: 1
27 Jun 2019 14:23:27,998 INFO : Inserting H3K9me0S10ph1K14ac1 - BI10023
27 Jun 2019 14:23:29,230 INFO : Total peptides inserted: 1
27 Jun 2019 14:23:29,230 INFO : Inserting H3K9me1S10ph1K14ac1 - BI10024
27 Jun 2019 14:23:30,539 INFO : Total peptides inserted: 1
27 Jun 2019 14:23:30,539 INFO : Inserting H3K9me2S10ph1K14ac1 - BI10025
27 Jun 2019 14:23:31,678 INFO : Total peptides inserted: 1
27 Jun 2019 14:23:31,679 INFO : Inserting H3K9me3S10ph1K14ac1 - BI10026
27 Jun 2019 14:23:32,784 INFO : Total peptides inserted: 1
27 Jun 2019 14:23:32,784 INFO : Inserting H3K9ac1S10ph1K14ac1 - BI10027
27 Jun 2019 14:23:34,097 INFO : Total peptides inserted: 1
27 Jun 2019 14:23:34,097 INFO : Inserting H3K18ac0K23ac0 - BI10028
27 Jun 2019 14:23:35,208 INFO : Total peptides inserted: 1
27 Jun 2019 14:23:35,209 INFO : Inserting H3K18ac1K23ac0 - BI10029
27 Jun 2019 14:23:36,204 INFO : Total peptides inserted: 1
27 Jun 2019 14:23:36,204 INFO : Inserting H3K18ac0K23ac1 - BI10030
27 Jun 2019 14:23:37,230 INFO : Total peptides inserted: 1
27 Jun 2019 14:23:37,231 INFO : Inserting H3K18ac1K23ac1 - BI10031
27 Jun 2019 14:23:38,139 INFO : Total peptides inserted: 1
27 Jun 2019 14:23:38,140 INFO : Inserting H3K18ub1K23ac0 - BI10032
27 Jun 2019 14:23:39,434 INFO : Total peptides inserted: 1
27 Jun 2019 14:23:39,434 INFO : Inserting H3K18ac0K23ub1 - BI10033
27 Jun 2019 14:23:40,840 INFO : Total peptides inserted: 1
27 Jun 2019 14:23:40,840 INFO : Inserting H3K27me0K36me0 - BI10034
27 Jun 2019 14:23:42,481 INFO : Total peptides inserted: 1
27 Jun 2019 14:23:42,482 INFO : Inserting H3K27me0K36me1 - BI10085
27 Jun 2019 14:23:43,923 INFO : Total peptides inserted: 1
27 Jun 2019 14:23:43,924 INFO : Inserting H3K27me0K36me2 - BI10086
27 Jun 2019 14:23:45,231 INFO : Total peptides inserted: 1
27 Jun 2019 14:23:45,231 INFO : Inserting H3K27me0K36me3 - BI10087
27 Jun 2019 14:23:46,427 INFO : Total peptides inserted: 1
27 Jun 2019 14:23:46,428 INFO : Inserting H3K27me1K36me0 - BI10035
27 Jun 2019 14:23:48,072 INFO : Total peptides inserted: 1
27 Jun 2019 14:23:48,073 INFO : Inserting H3K27me1K36me1 - BI10036
27 Jun 2019 14:23:49,203 INFO : Total peptides inserted: 1
27 Jun 2019 14:23:49,204 INFO : Inserting H3K27me1K36me2 - BI10037
27 Jun 2019 14:23:50,214 INFO : Total peptides inserted: 1
27 Jun 2019 14:23:50,214 INFO : Inserting H3K27me1K36me3 - BI10038
27 Jun 2019 14:23:51,360 INFO : Total peptides inserted: 1
27 Jun 2019 14:23:51,361 INFO : Inserting H3K27me2K36me0 - BI10039
27 Jun 2019 14:23:52,399 INFO : Total peptides inserted: 1
27 Jun 2019 14:23:52,399 INFO : Inserting H3K27me2K36me1 - BI10040
27 Jun 2019 14:23:53,688 INFO : Total peptides inserted: 1
27 Jun 2019 14:23:53,688 INFO : Inserting H3K27me2K36me2 - BI10041
27 Jun 2019 14:23:55,220 INFO : Total peptides inserted: 1
27 Jun 2019 14:23:55,221 INFO : Inserting H3K27me2K36me3 - BI10042
27 Jun 2019 14:23:56,346 INFO : Total peptides inserted: 1
27 Jun 2019 14:23:56,346 INFO : Inserting H3K27me3K36me0 - BI10043
27 Jun 2019 14:23:57,402 INFO : Total peptides inserted: 1
27 Jun 2019 14:23:57,402 INFO : Inserting H3K27me3K36me1 - BI10044
27 Jun 2019 14:23:58,714 INFO : Total peptides inserted: 1
27 Jun 2019 14:23:58,714 INFO : Inserting H3K27me3K36me2 - BI10045
27 Jun 2019 14:24:00,147 INFO : Total peptides inserted: 1
27 Jun 2019 14:24:00,147 INFO : Inserting H3K27me3K36me3 - BI10046
27 Jun 2019 14:24:01,859 INFO : Total peptides inserted: 1
27 Jun 2019 14:24:01,860 INFO : Inserting H3K27ac1K36me0 - BI10047
27 Jun 2019 14:24:03,147 INFO : Total peptides inserted: 1
27 Jun 2019 14:24:03,147 INFO : Inserting H3K27ac1K36me1 - BI10048
27 Jun 2019 14:24:04,380 INFO : Total peptides inserted: 1
27 Jun 2019 14:24:04,380 INFO : Inserting H3K27ac1K36me2 - BI10049
27 Jun 2019 14:24:05,385 INFO : Total peptides inserted: 1
27 Jun 2019 14:24:05,385 INFO : Inserting H3K27ac1K36me3 - BI10050
27 Jun 2019 14:24:06,407 INFO : Total peptides inserted: 1
27 Jun 2019 14:24:06,407 INFO : Inserting H3.3K27me0K36me0 - BI10051
27 Jun 2019 14:24:07,340 INFO : Total peptides inserted: 1
27 Jun 2019 14:24:07,341 INFO : Inserting H3NORM(41-49) - BI10052
27 Jun 2019 14:24:09,020 INFO : Total peptides inserted: 1
27 Jun 2019 14:24:09,021 INFO : Inserting H3NORM(41-49) - BI10052p
27 Jun 2019 14:24:10,255 INFO : Total peptides inserted: 1
27 Jun 2019 14:24:10,255 INFO : Inserting H3K56me0 - BI10054
27 Jun 2019 14:24:11,533 INFO : Total peptides inserted: 1
27 Jun 2019 14:24:11,534 INFO : Inserting H3K56me1 - BI10055
27 Jun 2019 14:24:12,623 INFO : Total peptides inserted: 1
27 Jun 2019 14:24:12,624 INFO : Inserting H3K56me2 - BI10056
27 Jun 2019 14:24:13,569 INFO : Total peptides inserted: 1
27 Jun 2019 14:24:13,569 INFO : Inserting H3K79me0 - BI10060
27 Jun 2019 14:24:14,940 INFO : Total peptides inserted: 1
27 Jun 2019 14:24:14,940 INFO : Inserting H3K79me1 - BI10061
27 Jun 2019 14:24:16,280 INFO : Total peptides inserted: 1
27 Jun 2019 14:24:16,280 INFO : Inserting H3K79me2 - BI10062
27 Jun 2019 14:24:17,423 INFO : Total peptides inserted: 1
27 Jun 2019 14:24:21,586 INFO : Copied LINCS_GCP_Plate23_annotated_minimized.skyd to cloud storage.
27 Jun 2019 14:24:21,751 INFO : Copied Histone2013.blib to cloud storage.
27 Jun 2019 14:24:21,905 INFO : Copied Histone2013.redundant.blib to cloud storage.
27 Jun 2019 14:24:23,994 INFO : Completed import of Skyline document from LINCS_GCP_Plate23_annotated_minimized_2018-05-07_14-31-53.sky.zip
27 Jun 2019 14:24:24,127 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'