Skyline document import - LINCS_GCP_Plate20_annotated_minimized_2018-05-07_15-41-44.sky.zip

GCP

Job Status

Created: 2019-06-27 14:12:34
Modified: 2020-06-01 17:07:59
Email: karen@broadinstitute.org
Status: COMPLETE
Info:
Description: Skyline document import - LINCS_GCP_Plate20_annotated_minimized_2018-05-07_15-41-44.sky.zip
File Path: /data/labkey/files/LINCS/Publications/Touchstone_2/GCP/@files/LINCS_GCP_Plate20_annotated_minimized_2018-05-07_15-41-44.sky_2019-06-27_14-12-42.log
Files: LINCS_GCP_Plate20_annotated_minimized_2018-05-07_15-41-44.sky_2019-06-27_14-12-42.log
Completed Runs: LINCS_GCP_Plate20_annotated_minimized_2018-05-07_15-41-44.sky.zip

Log File


27 Jun 2019 14:20:06,160 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
27 Jun 2019 14:20:09,448 INFO : Created temp file because input is from cloud: s3://s3.amazonaws.com/mc-panoramaweb/container5511/LINCS_GCP_Plate20_annotated_minimized_2018-05-07_15-41-44.sky.zip
27 Jun 2019 14:20:09,452 INFO : Starting to import Skyline document from LINCS_GCP_Plate20_annotated_minimized_2018-05-07_15-41-44.sky.zip
27 Jun 2019 14:20:09,453 INFO : Expanding Histone2013.blib
27 Jun 2019 14:20:09,456 INFO : Expanding Histone2013.redundant.blib
27 Jun 2019 14:20:09,460 INFO : Expanding LINCS_GCP_Plate20_annotated_minimized.skyd
27 Jun 2019 14:20:10,945 INFO : Expanding LINCS_GCP_Plate20_annotated_minimized.sky
27 Jun 2019 14:20:11,022 WARN : The version of this Skyline document is 4.11. This is newer than the highest supported version 4.1
27 Jun 2019 14:20:13,050 INFO : Inserting H3K4me0 - BI10003
27 Jun 2019 14:20:14,052 INFO : Total peptides inserted: 1
27 Jun 2019 14:20:14,052 INFO : Inserting H3K4me1 - BI10004
27 Jun 2019 14:20:14,972 INFO : Total peptides inserted: 1
27 Jun 2019 14:20:14,972 INFO : Inserting H3K4me2 - BI10005
27 Jun 2019 14:20:16,642 INFO : Total peptides inserted: 1
27 Jun 2019 14:20:16,643 INFO : Inserting H3K4me3 - BI10006
27 Jun 2019 14:20:18,966 INFO : Total peptides inserted: 1
27 Jun 2019 14:20:18,967 INFO : Inserting H3K4ac1 - BI10007
27 Jun 2019 14:20:19,813 INFO : Total peptides inserted: 1
27 Jun 2019 14:20:19,814 INFO : Inserting H3K9me0K14ac0 - BI10008
27 Jun 2019 14:20:20,968 INFO : Total peptides inserted: 1
27 Jun 2019 14:20:20,968 INFO : Inserting H3K9me1K14ac0 - BI10009
27 Jun 2019 14:20:22,088 INFO : Total peptides inserted: 1
27 Jun 2019 14:20:22,089 INFO : Inserting H3K9me2K14ac0 - BI10010
27 Jun 2019 14:20:23,239 INFO : Total peptides inserted: 1
27 Jun 2019 14:20:23,239 INFO : Inserting H3K9me3K14ac0 - BI10011
27 Jun 2019 14:20:24,303 INFO : Total peptides inserted: 1
27 Jun 2019 14:20:24,303 INFO : Inserting H3K9ac1K14ac0 - BI10012
27 Jun 2019 14:20:25,398 INFO : Total peptides inserted: 1
27 Jun 2019 14:20:25,398 INFO : Inserting H3K9me0K14ac1 - BI10013
27 Jun 2019 14:20:26,513 INFO : Total peptides inserted: 1
27 Jun 2019 14:20:26,514 INFO : Inserting H3K9me1K14ac1 - BI10014
27 Jun 2019 14:20:27,649 INFO : Total peptides inserted: 1
27 Jun 2019 14:20:27,649 INFO : Inserting H3K9me2K14ac1 - BI10015
27 Jun 2019 14:20:29,350 INFO : Total peptides inserted: 1
27 Jun 2019 14:20:29,350 INFO : Inserting H3K9me3K14ac1 - BI10016
27 Jun 2019 14:20:30,457 INFO : Total peptides inserted: 1
27 Jun 2019 14:20:30,457 INFO : Inserting H3K9ac1K14ac1 - BI10017
27 Jun 2019 14:20:31,541 INFO : Total peptides inserted: 1
27 Jun 2019 14:20:31,542 INFO : Inserting H3K9me0S10ph1K14ac0 - BI10018
27 Jun 2019 14:20:32,711 INFO : Total peptides inserted: 1
27 Jun 2019 14:20:32,711 INFO : Inserting H3K9me1S10ph1K14ac0 - BI10019
27 Jun 2019 14:20:33,910 INFO : Total peptides inserted: 1
27 Jun 2019 14:20:33,910 INFO : Inserting H3K9me2S10ph1K14ac0 - BI10020
27 Jun 2019 14:20:34,984 INFO : Total peptides inserted: 1
27 Jun 2019 14:20:34,984 INFO : Inserting H3K9me3S10ph1K14ac0 - BI10021
27 Jun 2019 14:20:36,025 INFO : Total peptides inserted: 1
27 Jun 2019 14:20:36,026 INFO : Inserting H3K9ac1S10ph1K14ac0 - BI10022
27 Jun 2019 14:20:37,037 INFO : Total peptides inserted: 1
27 Jun 2019 14:20:37,037 INFO : Inserting H3K9me0S10ph1K14ac1 - BI10023
27 Jun 2019 14:20:38,040 INFO : Total peptides inserted: 1
27 Jun 2019 14:20:38,040 INFO : Inserting H3K9me1S10ph1K14ac1 - BI10024
27 Jun 2019 14:20:39,179 INFO : Total peptides inserted: 1
27 Jun 2019 14:20:39,180 INFO : Inserting H3K9me2S10ph1K14ac1 - BI10025
27 Jun 2019 14:20:40,323 INFO : Total peptides inserted: 1
27 Jun 2019 14:20:40,324 INFO : Inserting H3K9me3S10ph1K14ac1 - BI10026
27 Jun 2019 14:20:41,523 INFO : Total peptides inserted: 1
27 Jun 2019 14:20:41,523 INFO : Inserting H3K9ac1S10ph1K14ac1 - BI10027
27 Jun 2019 14:20:42,734 INFO : Total peptides inserted: 1
27 Jun 2019 14:20:42,734 INFO : Inserting H3K18ac0K23ac0 - BI10028
27 Jun 2019 14:20:43,804 INFO : Total peptides inserted: 1
27 Jun 2019 14:20:43,804 INFO : Inserting H3K18ac1K23ac0 - BI10029
27 Jun 2019 14:20:44,827 INFO : Total peptides inserted: 1
27 Jun 2019 14:20:44,828 INFO : Inserting H3K18ac0K23ac1 - BI10030
27 Jun 2019 14:20:45,841 INFO : Total peptides inserted: 1
27 Jun 2019 14:20:45,841 INFO : Inserting H3K18ac1K23ac1 - BI10031
27 Jun 2019 14:20:46,838 INFO : Total peptides inserted: 1
27 Jun 2019 14:20:46,838 INFO : Inserting H3K18ub1K23ac0 - BI10032
27 Jun 2019 14:20:48,425 INFO : Total peptides inserted: 1
27 Jun 2019 14:20:48,425 INFO : Inserting H3K18ac0K23ub1 - BI10033
27 Jun 2019 14:20:49,752 INFO : Total peptides inserted: 1
27 Jun 2019 14:20:49,752 INFO : Inserting H3K27me0K36me0 - BI10034
27 Jun 2019 14:20:51,433 INFO : Total peptides inserted: 1
27 Jun 2019 14:20:51,434 INFO : Inserting H3K27me0K36me1 - BI10085
27 Jun 2019 14:20:52,784 INFO : Total peptides inserted: 1
27 Jun 2019 14:20:52,784 INFO : Inserting H3K27me0K36me2 - BI10086
27 Jun 2019 14:20:53,939 INFO : Total peptides inserted: 1
27 Jun 2019 14:20:53,939 INFO : Inserting H3K27me0K36me3 - BI10087
27 Jun 2019 14:20:55,077 INFO : Total peptides inserted: 1
27 Jun 2019 14:20:55,078 INFO : Inserting H3K27me1K36me0 - BI10035
27 Jun 2019 14:20:56,652 INFO : Total peptides inserted: 1
27 Jun 2019 14:20:56,652 INFO : Inserting H3K27me1K36me1 - BI10036
27 Jun 2019 14:20:57,784 INFO : Total peptides inserted: 1
27 Jun 2019 14:20:57,785 INFO : Inserting H3K27me1K36me2 - BI10037
27 Jun 2019 14:20:59,002 INFO : Total peptides inserted: 1
27 Jun 2019 14:20:59,002 INFO : Inserting H3K27me1K36me3 - BI10038
27 Jun 2019 14:21:00,005 INFO : Total peptides inserted: 1
27 Jun 2019 14:21:00,005 INFO : Inserting H3K27me2K36me0 - BI10039
27 Jun 2019 14:21:00,984 INFO : Total peptides inserted: 1
27 Jun 2019 14:21:00,984 INFO : Inserting H3K27me2K36me1 - BI10040
27 Jun 2019 14:21:02,176 INFO : Total peptides inserted: 1
27 Jun 2019 14:21:02,176 INFO : Inserting H3K27me2K36me2 - BI10041
27 Jun 2019 14:21:03,693 INFO : Total peptides inserted: 1
27 Jun 2019 14:21:03,693 INFO : Inserting H3K27me2K36me3 - BI10042
27 Jun 2019 14:21:04,733 INFO : Total peptides inserted: 1
27 Jun 2019 14:21:04,734 INFO : Inserting H3K27me3K36me0 - BI10043
27 Jun 2019 14:21:05,781 INFO : Total peptides inserted: 1
27 Jun 2019 14:21:05,781 INFO : Inserting H3K27me3K36me1 - BI10044
27 Jun 2019 14:21:07,193 INFO : Total peptides inserted: 1
27 Jun 2019 14:21:07,194 INFO : Inserting H3K27me3K36me2 - BI10045
27 Jun 2019 14:21:08,577 INFO : Total peptides inserted: 1
27 Jun 2019 14:21:08,577 INFO : Inserting H3K27me3K36me3 - BI10046
27 Jun 2019 14:21:09,997 INFO : Total peptides inserted: 1
27 Jun 2019 14:21:09,997 INFO : Inserting H3K27ac1K36me0 - BI10047
27 Jun 2019 14:21:11,258 INFO : Total peptides inserted: 1
27 Jun 2019 14:21:11,258 INFO : Inserting H3K27ac1K36me1 - BI10048
27 Jun 2019 14:21:12,582 INFO : Total peptides inserted: 1
27 Jun 2019 14:21:12,582 INFO : Inserting H3K27ac1K36me2 - BI10049
27 Jun 2019 14:21:13,682 INFO : Total peptides inserted: 1
27 Jun 2019 14:21:13,682 INFO : Inserting H3K27ac1K36me3 - BI10050
27 Jun 2019 14:21:14,737 INFO : Total peptides inserted: 1
27 Jun 2019 14:21:14,737 INFO : Inserting H3.3K27me0K36me0 - BI10051
27 Jun 2019 14:21:15,621 INFO : Total peptides inserted: 1
27 Jun 2019 14:21:15,622 INFO : Inserting H3NORM(41-49) - BI10052
27 Jun 2019 14:21:17,349 INFO : Total peptides inserted: 1
27 Jun 2019 14:21:17,349 INFO : Inserting H3NORM(41-49) - BI10052p
27 Jun 2019 14:21:18,592 INFO : Total peptides inserted: 1
27 Jun 2019 14:21:18,593 INFO : Inserting H3K56me0 - BI10054
27 Jun 2019 14:21:19,760 INFO : Total peptides inserted: 1
27 Jun 2019 14:21:19,760 INFO : Inserting H3K56me1 - BI10055
27 Jun 2019 14:21:20,775 INFO : Total peptides inserted: 1
27 Jun 2019 14:21:20,776 INFO : Inserting H3K56me2 - BI10056
27 Jun 2019 14:21:21,641 INFO : Total peptides inserted: 1
27 Jun 2019 14:21:21,641 INFO : Inserting H3K79me0 - BI10060
27 Jun 2019 14:21:22,937 INFO : Total peptides inserted: 1
27 Jun 2019 14:21:22,937 INFO : Inserting H3K79me1 - BI10061
27 Jun 2019 14:21:24,201 INFO : Total peptides inserted: 1
27 Jun 2019 14:21:24,201 INFO : Inserting H3K79me2 - BI10062
27 Jun 2019 14:21:25,336 INFO : Total peptides inserted: 1
27 Jun 2019 14:21:29,952 INFO : Copied LINCS_GCP_Plate20_annotated_minimized.skyd to cloud storage.
27 Jun 2019 14:21:30,083 INFO : Copied Histone2013.blib to cloud storage.
27 Jun 2019 14:21:30,191 INFO : Copied Histone2013.redundant.blib to cloud storage.
27 Jun 2019 14:21:30,204 INFO : Completed import of Skyline document from LINCS_GCP_Plate20_annotated_minimized_2018-05-07_15-41-44.sky.zip
27 Jun 2019 14:21:30,306 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'