Skyline document import - LINCS_GCP_Plate19_annotated_minimized_2018-05-07_14-42-13.sky.zip

GCP

Job Status

Created: 2019-06-27 14:12:34
Modified: 2020-06-01 17:07:59
Email: karen@broadinstitute.org
Status: COMPLETE
Info:
Description: Skyline document import - LINCS_GCP_Plate19_annotated_minimized_2018-05-07_14-42-13.sky.zip
File Path: /data/labkey/files/LINCS/Publications/Touchstone_2/GCP/@files/LINCS_GCP_Plate19_annotated_minimized_2018-05-07_14-42-13.sky_2019-06-27_14-12-40.log
Files: LINCS_GCP_Plate19_annotated_minimized_2018-05-07_14-42-13.sky_2019-06-27_14-12-40.log
Completed Runs: LINCS_GCP_Plate19_annotated_minimized_2018-05-07_14-42-13.sky.zip

Log File


27 Jun 2019 14:18:42,227 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
27 Jun 2019 14:18:47,711 INFO : Created temp file because input is from cloud: s3://s3.amazonaws.com/mc-panoramaweb/container5511/LINCS_GCP_Plate19_annotated_minimized_2018-05-07_14-42-13.sky.zip
27 Jun 2019 14:18:47,715 INFO : Starting to import Skyline document from LINCS_GCP_Plate19_annotated_minimized_2018-05-07_14-42-13.sky.zip
27 Jun 2019 14:18:47,716 INFO : Expanding Histone2013.blib
27 Jun 2019 14:18:47,720 INFO : Expanding Histone2013.redundant.blib
27 Jun 2019 14:18:47,724 INFO : Expanding LINCS_GCP_Plate19_annotated_minimized.skyd
27 Jun 2019 14:18:49,519 INFO : Expanding LINCS_GCP_Plate19_annotated_minimized.sky
27 Jun 2019 14:18:49,598 WARN : The version of this Skyline document is 4.11. This is newer than the highest supported version 4.1
27 Jun 2019 14:18:51,111 INFO : Inserting H3K4me0 - BI10003
27 Jun 2019 14:18:52,193 INFO : Total peptides inserted: 1
27 Jun 2019 14:18:52,194 INFO : Inserting H3K4me1 - BI10004
27 Jun 2019 14:18:53,284 INFO : Total peptides inserted: 1
27 Jun 2019 14:18:53,285 INFO : Inserting H3K4me2 - BI10005
27 Jun 2019 14:18:55,218 INFO : Total peptides inserted: 1
27 Jun 2019 14:18:55,219 INFO : Inserting H3K4me3 - BI10006
27 Jun 2019 14:18:57,236 INFO : Total peptides inserted: 1
27 Jun 2019 14:18:57,236 INFO : Inserting H3K4ac1 - BI10007
27 Jun 2019 14:18:58,091 INFO : Total peptides inserted: 1
27 Jun 2019 14:18:58,091 INFO : Inserting H3K9me0K14ac0 - BI10008
27 Jun 2019 14:18:59,274 INFO : Total peptides inserted: 1
27 Jun 2019 14:18:59,274 INFO : Inserting H3K9me1K14ac0 - BI10009
27 Jun 2019 14:19:00,380 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:00,381 INFO : Inserting H3K9me2K14ac0 - BI10010
27 Jun 2019 14:19:01,540 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:01,541 INFO : Inserting H3K9me3K14ac0 - BI10011
27 Jun 2019 14:19:02,782 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:02,783 INFO : Inserting H3K9ac1K14ac0 - BI10012
27 Jun 2019 14:19:03,902 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:03,903 INFO : Inserting H3K9me0K14ac1 - BI10013
27 Jun 2019 14:19:05,024 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:05,025 INFO : Inserting H3K9me1K14ac1 - BI10014
27 Jun 2019 14:19:06,150 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:06,151 INFO : Inserting H3K9me2K14ac1 - BI10015
27 Jun 2019 14:19:07,287 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:07,287 INFO : Inserting H3K9me3K14ac1 - BI10016
27 Jun 2019 14:19:08,412 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:08,412 INFO : Inserting H3K9ac1K14ac1 - BI10017
27 Jun 2019 14:19:09,519 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:09,520 INFO : Inserting H3K9me0S10ph1K14ac0 - BI10018
27 Jun 2019 14:19:10,687 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:10,687 INFO : Inserting H3K9me1S10ph1K14ac0 - BI10019
27 Jun 2019 14:19:11,866 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:11,866 INFO : Inserting H3K9me2S10ph1K14ac0 - BI10020
27 Jun 2019 14:19:12,923 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:12,924 INFO : Inserting H3K9me3S10ph1K14ac0 - BI10021
27 Jun 2019 14:19:13,964 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:13,965 INFO : Inserting H3K9ac1S10ph1K14ac0 - BI10022
27 Jun 2019 14:19:14,977 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:14,977 INFO : Inserting H3K9me0S10ph1K14ac1 - BI10023
27 Jun 2019 14:19:16,100 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:16,101 INFO : Inserting H3K9me1S10ph1K14ac1 - BI10024
27 Jun 2019 14:19:17,275 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:17,276 INFO : Inserting H3K9me2S10ph1K14ac1 - BI10025
27 Jun 2019 14:19:18,151 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:18,151 INFO : Inserting H3K9me3S10ph1K14ac1 - BI10026
27 Jun 2019 14:19:19,234 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:19,235 INFO : Inserting H3K9ac1S10ph1K14ac1 - BI10027
27 Jun 2019 14:19:20,325 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:20,326 INFO : Inserting H3K18ac0K23ac0 - BI10028
27 Jun 2019 14:19:21,546 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:21,547 INFO : Inserting H3K18ac1K23ac0 - BI10029
27 Jun 2019 14:19:22,506 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:22,506 INFO : Inserting H3K18ac0K23ac1 - BI10030
27 Jun 2019 14:19:23,482 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:23,482 INFO : Inserting H3K18ac1K23ac1 - BI10031
27 Jun 2019 14:19:24,402 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:24,402 INFO : Inserting H3K18ub1K23ac0 - BI10032
27 Jun 2019 14:19:25,297 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:25,297 INFO : Inserting H3K18ac0K23ub1 - BI10033
27 Jun 2019 14:19:26,695 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:26,696 INFO : Inserting H3K27me0K36me0 - BI10034
27 Jun 2019 14:19:28,451 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:28,452 INFO : Inserting H3K27me0K36me1 - BI10085
27 Jun 2019 14:19:30,048 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:30,049 INFO : Inserting H3K27me0K36me2 - BI10086
27 Jun 2019 14:19:31,318 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:31,319 INFO : Inserting H3K27me0K36me3 - BI10087
27 Jun 2019 14:19:32,606 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:32,606 INFO : Inserting H3K27me1K36me0 - BI10035
27 Jun 2019 14:19:34,195 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:34,196 INFO : Inserting H3K27me1K36me1 - BI10036
27 Jun 2019 14:19:35,303 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:35,304 INFO : Inserting H3K27me1K36me2 - BI10037
27 Jun 2019 14:19:36,283 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:36,283 INFO : Inserting H3K27me1K36me3 - BI10038
27 Jun 2019 14:19:37,543 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:37,543 INFO : Inserting H3K27me2K36me0 - BI10039
27 Jun 2019 14:19:38,543 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:38,543 INFO : Inserting H3K27me2K36me1 - BI10040
27 Jun 2019 14:19:39,727 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:39,727 INFO : Inserting H3K27me2K36me2 - BI10041
27 Jun 2019 14:19:41,229 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:41,229 INFO : Inserting H3K27me2K36me3 - BI10042
27 Jun 2019 14:19:42,317 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:42,318 INFO : Inserting H3K27me3K36me0 - BI10043
27 Jun 2019 14:19:43,299 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:43,300 INFO : Inserting H3K27me3K36me1 - BI10044
27 Jun 2019 14:19:44,596 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:44,597 INFO : Inserting H3K27me3K36me2 - BI10045
27 Jun 2019 14:19:46,081 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:46,081 INFO : Inserting H3K27me3K36me3 - BI10046
27 Jun 2019 14:19:47,710 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:47,711 INFO : Inserting H3K27ac1K36me0 - BI10047
27 Jun 2019 14:19:48,899 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:48,899 INFO : Inserting H3K27ac1K36me1 - BI10048
27 Jun 2019 14:19:49,444 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:49,444 INFO : Inserting H3K27ac1K36me2 - BI10049
27 Jun 2019 14:19:49,876 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:49,877 INFO : Inserting H3K27ac1K36me3 - BI10050
27 Jun 2019 14:19:50,957 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:50,958 INFO : Inserting H3.3K27me0K36me0 - BI10051
27 Jun 2019 14:19:51,854 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:51,855 INFO : Inserting H3NORM(41-49) - BI10052
27 Jun 2019 14:19:53,474 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:53,474 INFO : Inserting H3NORM(41-49) - BI10052a PRECURSOR ONLY
27 Jun 2019 14:19:54,673 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:54,674 INFO : Inserting H3K56me0 - BI10054
27 Jun 2019 14:19:55,829 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:55,829 INFO : Inserting H3K56me1 - BI10055
27 Jun 2019 14:19:56,851 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:56,852 INFO : Inserting H3K56me2 - BI10056
27 Jun 2019 14:19:57,795 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:57,796 INFO : Inserting H3K79me0 - BI10060
27 Jun 2019 14:19:59,133 INFO : Total peptides inserted: 1
27 Jun 2019 14:19:59,134 INFO : Inserting H3K79me1 - BI10061
27 Jun 2019 14:20:00,506 INFO : Total peptides inserted: 1
27 Jun 2019 14:20:00,507 INFO : Inserting H3K79me2 - BI10062
27 Jun 2019 14:20:01,654 INFO : Total peptides inserted: 1
27 Jun 2019 14:20:05,358 INFO : Copied LINCS_GCP_Plate19_annotated_minimized.skyd to cloud storage.
27 Jun 2019 14:20:05,513 INFO : Copied Histone2013.blib to cloud storage.
27 Jun 2019 14:20:05,656 INFO : Copied Histone2013.redundant.blib to cloud storage.
27 Jun 2019 14:20:05,664 INFO : Completed import of Skyline document from LINCS_GCP_Plate19_annotated_minimized_2018-05-07_14-42-13.sky.zip
27 Jun 2019 14:20:05,780 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'