Skyline document import - LINCS_GCP_Plate15_annotated_minimized_2018-05-02_22-46-29.sky.zip

GCP

Job Status

Created: 2019-06-27 14:12:32
Modified: 2020-06-01 17:07:59
Email: karen@broadinstitute.org
Status: COMPLETE
Info:
Description: Skyline document import - LINCS_GCP_Plate15_annotated_minimized_2018-05-02_22-46-29.sky.zip
File Path: /data/labkey/files/LINCS/Publications/Touchstone_2/GCP/@files/LINCS_GCP_Plate15_annotated_minimized_2018-05-02_22-46-29.sky_2019-06-27_14-12-32.log
Files: LINCS_GCP_Plate15_annotated_minimized_2018-05-02_22-46-29.sky_2019-06-27_14-12-32.log
Completed Runs: LINCS_GCP_Plate15_annotated_minimized_2018-05-02_22-46-29.sky.zip

Log File


27 Jun 2019 14:12:33,159 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
27 Jun 2019 14:12:41,936 INFO : Created temp file because input is from cloud: s3://s3.amazonaws.com/mc-panoramaweb/container5511/LINCS_GCP_Plate15_annotated_minimized_2018-05-02_22-46-29.sky.zip
27 Jun 2019 14:12:41,940 INFO : Starting to import Skyline document from LINCS_GCP_Plate15_annotated_minimized_2018-05-02_22-46-29.sky.zip
27 Jun 2019 14:12:41,940 INFO : Expanding Histone2013.blib
27 Jun 2019 14:12:41,943 INFO : Expanding Histone2013.redundant.blib
27 Jun 2019 14:12:41,946 INFO : Expanding LINCS_GCP_Plate15_annotated_minimized.skyd
27 Jun 2019 14:12:44,597 INFO : Expanding LINCS_GCP_Plate15_annotated_minimized.sky
27 Jun 2019 14:12:44,676 WARN : The version of this Skyline document is 4.11. This is newer than the highest supported version 4.1
27 Jun 2019 14:12:47,558 INFO : Inserting H3K4me0 - BI10003
27 Jun 2019 14:12:51,418 INFO : Total peptides inserted: 1
27 Jun 2019 14:12:51,419 INFO : Inserting H3K4me1 - BI10004
27 Jun 2019 14:12:52,486 INFO : Total peptides inserted: 1
27 Jun 2019 14:12:52,486 INFO : Inserting H3K4me2 - BI10005
27 Jun 2019 14:12:53,908 INFO : Total peptides inserted: 1
27 Jun 2019 14:12:53,908 INFO : Inserting H3K4me3 - BI10006
27 Jun 2019 14:12:55,960 INFO : Total peptides inserted: 1
27 Jun 2019 14:12:55,961 INFO : Inserting H3K4ac1 - BI10007
27 Jun 2019 14:12:56,786 INFO : Total peptides inserted: 1
27 Jun 2019 14:12:56,787 INFO : Inserting H3K9me0K14ac0 - BI10008
27 Jun 2019 14:12:58,013 INFO : Total peptides inserted: 1
27 Jun 2019 14:12:58,013 INFO : Inserting H3K9me1K14ac0 - BI10009
27 Jun 2019 14:12:59,241 INFO : Total peptides inserted: 1
27 Jun 2019 14:12:59,242 INFO : Inserting H3K9me2K14ac0 - BI10010
27 Jun 2019 14:13:00,463 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:00,463 INFO : Inserting H3K9me3K14ac0 - BI10011
27 Jun 2019 14:13:01,571 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:01,572 INFO : Inserting H3K9ac1K14ac0 - BI10012
27 Jun 2019 14:13:02,874 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:02,875 INFO : Inserting H3K9me0K14ac1 - BI10013
27 Jun 2019 14:13:04,020 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:04,021 INFO : Inserting H3K9me1K14ac1 - BI10014
27 Jun 2019 14:13:05,142 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:05,142 INFO : Inserting H3K9me2K14ac1 - BI10015
27 Jun 2019 14:13:06,404 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:06,404 INFO : Inserting H3K9me3K14ac1 - BI10016
27 Jun 2019 14:13:07,658 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:07,658 INFO : Inserting H3K9ac1K14ac1 - BI10017
27 Jun 2019 14:13:08,840 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:08,841 INFO : Inserting H3K9me0S10ph1K14ac0 - BI10018
27 Jun 2019 14:13:10,080 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:10,080 INFO : Inserting H3K9me1S10ph1K14ac0 - BI10019
27 Jun 2019 14:13:11,319 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:11,320 INFO : Inserting H3K9me2S10ph1K14ac0 - BI10020
27 Jun 2019 14:13:12,409 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:12,410 INFO : Inserting H3K9me3S10ph1K14ac0 - BI10021
27 Jun 2019 14:13:13,546 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:13,546 INFO : Inserting H3K9ac1S10ph1K14ac0 - BI10022
27 Jun 2019 14:13:14,563 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:14,563 INFO : Inserting H3K9me0S10ph1K14ac1 - BI10023
27 Jun 2019 14:13:15,822 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:15,823 INFO : Inserting H3K9me1S10ph1K14ac1 - BI10024
27 Jun 2019 14:13:17,117 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:17,118 INFO : Inserting H3K9me2S10ph1K14ac1 - BI10025
27 Jun 2019 14:13:18,204 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:18,205 INFO : Inserting H3K9me3S10ph1K14ac1 - BI10026
27 Jun 2019 14:13:19,274 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:19,274 INFO : Inserting H3K9ac1S10ph1K14ac1 - BI10027
27 Jun 2019 14:13:20,414 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:20,415 INFO : Inserting H3K18ac0K23ac0 - BI10028
27 Jun 2019 14:13:21,537 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:21,537 INFO : Inserting H3K18ac1K23ac0 - BI10029
27 Jun 2019 14:13:22,505 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:22,506 INFO : Inserting H3K18ac0K23ac1 - BI10030
27 Jun 2019 14:13:23,536 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:23,536 INFO : Inserting H3K18ac1K23ac1 - BI10031
27 Jun 2019 14:13:24,456 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:24,457 INFO : Inserting H3K18ub1K23ac0 - BI10032
27 Jun 2019 14:13:25,763 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:25,763 INFO : Inserting H3K18ac0K23ub1 - BI10033
27 Jun 2019 14:13:27,062 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:27,063 INFO : Inserting H3K27me0K36me0 - BI10034
27 Jun 2019 14:13:28,727 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:28,727 INFO : Inserting H3K27me0K36me1 - BI1xx01
27 Jun 2019 14:13:30,192 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:30,193 INFO : Inserting H3K27me0K36me2 - BI1xx02
27 Jun 2019 14:13:31,488 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:31,488 INFO : Inserting H3K27me0K36me3 - BI1xx03
27 Jun 2019 14:13:32,808 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:32,809 INFO : Inserting H3K27me1K36me0 - BI10035
27 Jun 2019 14:13:34,512 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:34,513 INFO : Inserting H3K27me1K36me1 - BI10036
27 Jun 2019 14:13:35,709 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:35,710 INFO : Inserting H3K27me1K36me2 - BI10037
27 Jun 2019 14:13:36,951 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:36,952 INFO : Inserting H3K27me1K36me3 - BI10038
27 Jun 2019 14:13:38,200 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:38,201 INFO : Inserting H3K27me2K36me0 - BI10039
27 Jun 2019 14:13:39,232 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:39,232 INFO : Inserting H3K27me2K36me1 - BI10040
27 Jun 2019 14:13:40,538 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:40,539 INFO : Inserting H3K27me2K36me2 - BI10041
27 Jun 2019 14:13:42,088 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:42,089 INFO : Inserting H3K27me2K36me3 - BI10042
27 Jun 2019 14:13:43,193 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:43,193 INFO : Inserting H3K27me3K36me0 - BI10043
27 Jun 2019 14:13:44,385 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:44,385 INFO : Inserting H3K27me3K36me1 - BI10044
27 Jun 2019 14:13:45,824 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:45,824 INFO : Inserting H3K27me3K36me2 - BI10045
27 Jun 2019 14:13:47,398 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:47,398 INFO : Inserting H3K27me3K36me3 - BI10046
27 Jun 2019 14:13:49,486 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:49,487 INFO : Inserting H3K27ac1K36me0 - BI10047
27 Jun 2019 14:13:50,931 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:50,932 INFO : Inserting H3K27ac1K36me1 - BI10048
27 Jun 2019 14:13:52,300 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:52,300 INFO : Inserting H3K27ac1K36me2 - BI10049
27 Jun 2019 14:13:53,511 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:53,512 INFO : Inserting H3K27ac1K36me3 - BI10050
27 Jun 2019 14:13:54,689 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:54,689 INFO : Inserting H3.3K27me0K36me0 - BI10051
27 Jun 2019 14:13:55,580 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:55,581 INFO : Inserting H3NORM(41-49) - BI10052
27 Jun 2019 14:13:57,227 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:57,227 INFO : Inserting H3NORM(41to49) - SILACNorm
27 Jun 2019 14:13:58,683 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:58,683 INFO : Inserting H3K56me0 - BI10054
27 Jun 2019 14:13:59,876 INFO : Total peptides inserted: 1
27 Jun 2019 14:13:59,876 INFO : Inserting H3K56me1 - BI10055
27 Jun 2019 14:14:01,016 INFO : Total peptides inserted: 1
27 Jun 2019 14:14:01,017 INFO : Inserting H3K56me2 - BI10056
27 Jun 2019 14:14:02,036 INFO : Total peptides inserted: 1
27 Jun 2019 14:14:02,036 INFO : Inserting H3K79me0 - BI10060
27 Jun 2019 14:14:03,433 INFO : Total peptides inserted: 1
27 Jun 2019 14:14:03,434 INFO : Inserting H3K79me1 - BI10061
27 Jun 2019 14:14:04,844 INFO : Total peptides inserted: 1
27 Jun 2019 14:14:04,845 INFO : Inserting H3K79me2 - BI10062
27 Jun 2019 14:14:06,091 INFO : Total peptides inserted: 1
27 Jun 2019 14:14:19,115 INFO : Copied LINCS_GCP_Plate15_annotated_minimized.skyd to cloud storage.
27 Jun 2019 14:14:19,435 INFO : Copied Histone2013.blib to cloud storage.
27 Jun 2019 14:14:19,573 INFO : Copied Histone2013.redundant.blib to cloud storage.
27 Jun 2019 14:14:21,655 INFO : Completed import of Skyline document from LINCS_GCP_Plate15_annotated_minimized_2018-05-02_22-46-29.sky.zip
27 Jun 2019 14:14:22,251 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'