LINCS_P100_DIA_Plate63a_annotated_minimized_2019-11-14_15-28-26.sky.zip

P100
 
90 proteins, 96 peptides, 192 precursors, 2,764 transitions  -  94 replicates, 96 calibration curves  -  Skyline-daily (64-bit) 19.1.1.309 (1dc16c97a)
Protein Note/Annotations
 
NANS_CL01 
Peptide Note/Annotations
Precursor Note/Annotations
ALGSPTKQLLPCEMACNEK
pr_gene_id: 54187
pr_gene_symbol: NANS
pr_id: 7849_NANS_S275_ALGS[+80]PTKQLLPC[+57]EMAC[+57]NEK
pr_p100_base_peptide: ALGSPTKQLLPCEMACNEK
pr_p100_cluster: CL01
pr_p100_gene_cluster_code: NANS_CL01
pr_p100_modified_peptide_code: ALGS[+80]PTKQLLPC[+57]EMAC[+57]NEK
pr_p100_original_probe_id: 7849_NANS_S275
pr_p100_phosphosite: S275
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: Q9NR45
12225.9884 
ALGSPTKQLLPCEMACNEK
light3+743.00342225.98841125.0000 
ALGSPTKQLLPCEMACNEK
pr_gene_id: 54187
pr_gene_symbol: NANS
pr_id: 7849_NANS_S275_ALGS[+80]PTKQLLPC[+57]EMAC[+57]NEK
pr_p100_base_peptide: ALGSPTKQLLPCEMACNEK
pr_p100_cluster: CL01
pr_p100_gene_cluster_code: NANS_CL01
pr_p100_modified_peptide_code: ALGS[+80]PTKQLLPC[+57]EMAC[+57]NEK
pr_p100_original_probe_id: 7849_NANS_S275
pr_p100_phosphosite: S275
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: Q9NR45
12225.9884 
ALGSPTKQLLPCEMACNEK
heavy3+748.34622242.01681125.0000 
AHNAK_CL01 
Peptide Note/Annotations
Precursor Note/Annotations
VSMPDVELNLKSPK
pr_gene_id: 79026
pr_gene_symbol: AHNAK
pr_id: 5003_AHNAK_S3426_VSMPDVELNLKS[+80]PK
pr_p100_base_peptide: VSMPDVELNLKSPK
pr_p100_cluster: CL01
pr_p100_gene_cluster_code: AHNAK_CL01
pr_p100_modified_peptide_code: VSMPDVELNLKS[+80]PK
pr_p100_original_probe_id: 5003_AHNAK_S3426
pr_p100_phosphosite: S3426
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: Q09666
11635.7943 
VSMPDVELNLKSPK
light2+818.90441635.79432125.0000 
VSMPDVELNLKSPK
pr_gene_id: 79026
pr_gene_symbol: AHNAK
pr_id: 5003_AHNAK_S3426_VSMPDVELNLKS[+80]PK
pr_p100_base_peptide: VSMPDVELNLKSPK
pr_p100_cluster: CL01
pr_p100_gene_cluster_code: AHNAK_CL01
pr_p100_modified_peptide_code: VSMPDVELNLKS[+80]PK
pr_p100_original_probe_id: 5003_AHNAK_S3426
pr_p100_phosphosite: S3426
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: Q09666
11635.7943 
VSMPDVELNLKSPK
heavy2+826.91861651.82272125.0000 
DDX54_CL02 
Peptide Note/Annotations
Precursor Note/Annotations
LGPGRPLPTFPTSECTSDVEPDTR
pr_gene_id: 79039
pr_gene_symbol: DDX54
pr_id: 6696_DDX54_S75_LGPGRPLPTFPTSEC[+57]TS[+80]DVEPDTR
pr_p100_base_peptide: LGPGRPLPTFPTSECTSDVEPDTR
pr_p100_cluster: CL02
pr_p100_gene_cluster_code: DDX54_CL02
pr_p100_modified_peptide_code: LGPGRPLPTFPTSEC[+57]TS[+80]DVEPDTR
pr_p100_original_probe_id: 6696_DDX54_S75
pr_p100_phosphosite: S75
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: Q8TDD1
02708.2153 
LGPGRPLPTFPTSECTSDVEPDTR
light3+903.74572708.2153925.0000 
LGPGRPLPTFPTSECTSDVEPDTR
pr_gene_id: 79039
pr_gene_symbol: DDX54
pr_id: 6696_DDX54_S75_LGPGRPLPTFPTSEC[+57]TS[+80]DVEPDTR
pr_p100_base_peptide: LGPGRPLPTFPTSECTSDVEPDTR
pr_p100_cluster: CL02
pr_p100_gene_cluster_code: DDX54_CL02
pr_p100_modified_peptide_code: LGPGRPLPTFPTSEC[+57]TS[+80]DVEPDTR
pr_p100_original_probe_id: 6696_DDX54_S75
pr_p100_phosphosite: S75
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: Q8TDD1
02708.2153 
LGPGRPLPTFPTSECTSDVEPDTR
heavy3+907.08182718.2236925.0000 
HSPC216_CL02 
Peptide Note/Annotations
Precursor Note/Annotations
LPLVPESPRR
pr_gene_id: 51530
pr_gene_symbol: ZC3HC1
pr_id: 1130_HSPC216_S321_LPLVPES[+80]PRR
pr_p100_base_peptide: LPLVPESPRR
pr_p100_cluster: CL02
pr_p100_gene_cluster_code: HSPC216_CL02
pr_p100_modified_peptide_code: LPLVPES[+80]PRR
pr_p100_original_probe_id: 1130_HSPC216_S321
pr_p100_phosphosite: S321
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: Q86WB0
11242.6486 
LPLVPESPRR
light2+622.33161242.64862025.0000 
LPLVPESPRR
pr_gene_id: 51530
pr_gene_symbol: ZC3HC1
pr_id: 1130_HSPC216_S321_LPLVPES[+80]PRR
pr_p100_base_peptide: LPLVPESPRR
pr_p100_cluster: CL02
pr_p100_gene_cluster_code: HSPC216_CL02
pr_p100_modified_peptide_code: LPLVPES[+80]PRR
pr_p100_original_probe_id: 1130_HSPC216_S321
pr_p100_phosphosite: S321
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: Q86WB0
11242.6486 
LPLVPESPRR
heavy2+632.33981262.66512025.0000 
PFKF_CL03 
Peptide Note/Annotations
Precursor Note/Annotations
SFAGNLNTYKR
pr_gene_id: 5214
pr_gene_symbol: PFKP
pr_id: 3145_PFKF_S386_S[+80]FAGNLNTYKR
pr_p100_base_peptide: SFAGNLNTYKR
pr_p100_cluster: CL03
pr_p100_gene_cluster_code: PFKF_CL03
pr_p100_modified_peptide_code: S[+80]FAGNLNTYKR
pr_p100_original_probe_id: 3145_PFKF_S386
pr_p100_phosphosite: S386
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: Q01813
11349.6129 
SFAGNLNTYKR
light2+675.81371349.61291125.0000 
SFAGNLNTYKR
pr_gene_id: 5214
pr_gene_symbol: PFKP
pr_id: 3145_PFKF_S386_S[+80]FAGNLNTYKR
pr_p100_base_peptide: SFAGNLNTYKR
pr_p100_cluster: CL03
pr_p100_gene_cluster_code: PFKF_CL03
pr_p100_modified_peptide_code: S[+80]FAGNLNTYKR
pr_p100_original_probe_id: 3145_PFKF_S386
pr_p100_phosphosite: S386
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: Q01813
11349.6129 
SFAGNLNTYKR
heavy2+684.82501367.63541125.0000 
TMSL3_CL03 
Peptide Note/Annotations
Precursor Note/Annotations
SDKPDMAEIEKFDK
pr_gene_id: 7114
pr_gene_symbol: TMSB4X
pr_id: 290_TMSL3_S2_S[+122]DKPDMAEIEKFDK
pr_p100_base_peptide: SDKPDMAEIEKFDK
pr_p100_cluster: CL03
pr_p100_gene_cluster_code: TMSL3_CL03
pr_p100_modified_peptide_code: S[+122]DKPDMAEIEKFDK
pr_p100_original_probe_id: 290_TMSL3_S2
pr_p100_phosphosite: S2
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: P62328
11773.7532 
SDKPDMAEIEKFDK
light3+592.25841773.75321225.0000 
SDKPDMAEIEKFDK
pr_gene_id: 7114
pr_gene_symbol: TMSB4X
pr_id: 290_TMSL3_S2_S[+122]DKPDMAEIEKFDK
pr_p100_base_peptide: SDKPDMAEIEKFDK
pr_p100_cluster: CL03
pr_p100_gene_cluster_code: TMSL3_CL03
pr_p100_modified_peptide_code: S[+122]DKPDMAEIEKFDK
pr_p100_original_probe_id: 290_TMSL3_S2
pr_p100_phosphosite: S2
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: P62328
11773.7532 
SDKPDMAEIEKFDK
heavy3+597.60121789.78161225.0000 
SDKPDMAEIEKFDK
pr_gene_id: 7114
pr_gene_symbol: TMSB4X
pr_id: 290_TMSL3_S2_S[+122]DKPDM[+16]AEIEKFDK
pr_p100_base_peptide: SDKPDMAEIEKFDK
pr_p100_cluster: CL03
pr_p100_gene_cluster_code: TMSL3_CL03
pr_p100_modified_peptide_code: S[+122]DKPDM[+16]AEIEKFDK
pr_p100_original_probe_id: 290_TMSL3_S2
pr_p100_phosphosite: S2
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: P62328
11789.7481 
SDKPDMAEIEKFDK
light3+597.59001789.74811525.0000 
SDKPDMAEIEKFDK
pr_gene_id: 7114
pr_gene_symbol: TMSB4X
pr_id: 290_TMSL3_S2_S[+122]DKPDM[+16]AEIEKFDK
pr_p100_base_peptide: SDKPDMAEIEKFDK
pr_p100_cluster: CL03
pr_p100_gene_cluster_code: TMSL3_CL03
pr_p100_modified_peptide_code: S[+122]DKPDM[+16]AEIEKFDK
pr_p100_original_probe_id: 290_TMSL3_S2
pr_p100_phosphosite: S2
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: P62328
11789.7481 
SDKPDMAEIEKFDK
heavy3+602.93281805.77651525.0000 
AD029_CL04 
Peptide Note/Annotations
Precursor Note/Annotations
QDDSPPRPIIGPALPPGFIK
pr_gene_id: 55425
pr_gene_symbol: KIAA1704
pr_id: 6423_AD029_S105_QDDS[+80]PPRPIIGPALPPGFIK
pr_p100_base_peptide: QDDSPPRPIIGPALPPGFIK
pr_p100_cluster: CL04
pr_p100_gene_cluster_code: AD029_CL04
pr_p100_modified_peptide_code: QDDS[+80]PPRPIIGPALPPGFIK
pr_p100_original_probe_id: 6423_AD029_S105
pr_p100_phosphosite: S105
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: Q8IXQ4
02194.1188 
QDDSPPRPIIGPALPPGFIK
light3+732.38022194.11881625.0000 
QDDSPPRPIIGPALPPGFIK
pr_gene_id: 55425
pr_gene_symbol: KIAA1704
pr_id: 6423_AD029_S105_QDDS[+80]PPRPIIGPALPPGFIK
pr_p100_base_peptide: QDDSPPRPIIGPALPPGFIK
pr_p100_cluster: CL04
pr_p100_gene_cluster_code: AD029_CL04
pr_p100_modified_peptide_code: QDDS[+80]PPRPIIGPALPPGFIK
pr_p100_original_probe_id: 6423_AD029_S105
pr_p100_phosphosite: S105
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: Q8IXQ4
02194.1188 
QDDSPPRPIIGPALPPGFIK
heavy3+735.05162202.13301625.0000 
CDC2_CL04 
Peptide Note/Annotations
Precursor Note/Annotations
VYTHEVVTLWYR
pr_gene_id: 983
pr_gene_symbol: CDC2
pr_id: 9285_CDC2_T161_VYT[+80]HEVVTLWYR
pr_p100_base_peptide: VYTHEVVTLWYR
pr_p100_cluster: CL04
pr_p100_gene_cluster_code: CDC2_CL04
pr_p100_modified_peptide_code: VYT[+80]HEVVTLWYR
pr_p100_original_probe_id: 9285_CDC2_T161
pr_p100_phosphosite: T161
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: P06493
01644.7701 
VYTHEVVTLWYR
light3+549.26401644.7701825.0000 
VYTHEVVTLWYR
pr_gene_id: 983
pr_gene_symbol: CDC2
pr_id: 9285_CDC2_T161_VYT[+80]HEVVTLWYR
pr_p100_base_peptide: VYTHEVVTLWYR
pr_p100_cluster: CL04
pr_p100_gene_cluster_code: CDC2_CL04
pr_p100_modified_peptide_code: VYT[+80]HEVVTLWYR
pr_p100_original_probe_id: 9285_CDC2_T161
pr_p100_phosphosite: T161
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: P06493
01644.7701 
VYTHEVVTLWYR
heavy3+552.60011654.7784825.0000 
ATAD2_CL05 
Peptide Note/Annotations
Precursor Note/Annotations
KPNIFYSGPASPARPR
pr_gene_id: 29028
pr_gene_symbol: ATAD2
pr_id: 6108_ATAD2_S327_KPNIFYSGPAS[+80]PARPR
pr_p100_base_peptide: KPNIFYSGPASPARPR
pr_p100_cluster: CL05
pr_p100_gene_cluster_code: ATAD2_CL05
pr_p100_modified_peptide_code: KPNIFYSGPAS[+80]PARPR
pr_p100_original_probe_id: 6108_ATAD2_S327
pr_p100_phosphosite: S327
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: Q6PL18
01836.9036 
KPNIFYSGPASPARPR
light3+613.30851836.90362225.0000 
KPNIFYSGPASPARPR
pr_gene_id: 29028
pr_gene_symbol: ATAD2
pr_id: 6108_ATAD2_S327_KPNIFYSGPAS[+80]PARPR
pr_p100_base_peptide: KPNIFYSGPASPARPR
pr_p100_cluster: CL05
pr_p100_gene_cluster_code: ATAD2_CL05
pr_p100_modified_peptide_code: KPNIFYSGPAS[+80]PARPR
pr_p100_original_probe_id: 6108_ATAD2_S327
pr_p100_phosphosite: S327
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: Q6PL18
01836.9036 
KPNIFYSGPASPARPR
heavy3+616.64461846.91192225.0000 
BAT2D1_CL05 
Peptide Note/Annotations
Precursor Note/Annotations
AFGSGIDIKPGTPPIAGR
pr_gene_id: 23215
pr_gene_symbol: BAT2D1
pr_id: 8879_BAT2D1_T2675_AFGSGIDIKPGT[+80]PPIAGR
pr_p100_base_peptide: AFGSGIDIKPGTPPIAGR
pr_p100_cluster: CL05
pr_p100_gene_cluster_code: BAT2D1_CL05
pr_p100_modified_peptide_code: AFGSGIDIKPGT[+80]PPIAGR
pr_p100_original_probe_id: 8879_BAT2D1_T2675
pr_p100_phosphosite: T2675
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: Q9Y520
01832.9186 
AFGSGIDIKPGTPPIAGR
light3+611.98011832.91862525.0000 
AFGSGIDIKPGTPPIAGR
pr_gene_id: 23215
pr_gene_symbol: BAT2D1
pr_id: 8879_BAT2D1_T2675_AFGSGIDIKPGT[+80]PPIAGR
pr_p100_base_peptide: AFGSGIDIKPGTPPIAGR
pr_p100_cluster: CL05
pr_p100_gene_cluster_code: BAT2D1_CL05
pr_p100_modified_peptide_code: AFGSGIDIKPGT[+80]PPIAGR
pr_p100_original_probe_id: 8879_BAT2D1_T2675
pr_p100_phosphosite: T2675
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: Q9Y520
01832.9186 
AFGSGIDIKPGTPPIAGR
heavy3+615.31621842.92692525.0000