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Targeted MS Runs
LINCS_P100_DIA_Plate75_annotated_minimized_2019-04-08_16-26-05.sky.zip
P100
Document Summary
LINCS_P100_DIA_Plate75_annotated_minimized_2019-04-08_16-26-05.sky.zip
72 MB
SkyP file (link only, 1KB)
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1 version
90 proteins
,
96 peptides
,
192 precursors
,
2,764 transitions
-
66 replicates
,
96 calibration curves
- Skyline-daily (64-bit) 4.2.1.19095
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NANS_CL01
Peptide
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ALG
S
PTKQLLP
C
EMA
C
NEK
pr_gene_id: 54187
pr_gene_symbol: NANS
pr_id: 7849_NANS_S275_ALGS[+80]PTKQLLPC[+57]EMAC[+57]NEK
pr_p100_base_peptide: ALGSPTKQLLPCEMACNEK
pr_p100_cluster: CL01
pr_p100_gene_cluster_code: NANS_CL01
pr_p100_modified_peptide_code: ALGS[+80]PTKQLLPC[+57]EMAC[+57]NEK
pr_p100_original_probe_id: 7849_NANS_S275
pr_p100_phosphosite: S275
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: Q9NR45
1
2225.9884
ALG
S
PTKQLLP
C
EMA
C
NEK
light
3+
743.0034
2225.9884
11
25.0000
ALG
S
PTKQLLP
C
EMA
C
NEK
pr_gene_id: 54187
pr_gene_symbol: NANS
pr_id: 7849_NANS_S275_ALGS[+80]PTKQLLPC[+57]EMAC[+57]NEK
pr_p100_base_peptide: ALGSPTKQLLPCEMACNEK
pr_p100_cluster: CL01
pr_p100_gene_cluster_code: NANS_CL01
pr_p100_modified_peptide_code: ALGS[+80]PTKQLLPC[+57]EMAC[+57]NEK
pr_p100_original_probe_id: 7849_NANS_S275
pr_p100_phosphosite: S275
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: Q9NR45
1
2225.9884
ALG
S
PT
K
QLLP
C
EMA
C
NE
K
heavy
3+
748.3462
2242.0168
11
25.0000
AHNAK_CL01
Peptide
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VSMPDVELNLK
S
PK
pr_gene_id: 79026
pr_gene_symbol: AHNAK
pr_id: 5003_AHNAK_S3426_VSMPDVELNLKS[+80]PK
pr_p100_base_peptide: VSMPDVELNLKSPK
pr_p100_cluster: CL01
pr_p100_gene_cluster_code: AHNAK_CL01
pr_p100_modified_peptide_code: VSMPDVELNLKS[+80]PK
pr_p100_original_probe_id: 5003_AHNAK_S3426
pr_p100_phosphosite: S3426
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: Q09666
1
1635.7943
VSMPDVELNLK
S
PK
light
2+
818.9044
1635.7943
21
25.0000
VSMPDVELNLK
S
PK
pr_gene_id: 79026
pr_gene_symbol: AHNAK
pr_id: 5003_AHNAK_S3426_VSMPDVELNLKS[+80]PK
pr_p100_base_peptide: VSMPDVELNLKSPK
pr_p100_cluster: CL01
pr_p100_gene_cluster_code: AHNAK_CL01
pr_p100_modified_peptide_code: VSMPDVELNLKS[+80]PK
pr_p100_original_probe_id: 5003_AHNAK_S3426
pr_p100_phosphosite: S3426
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: Q09666
1
1635.7943
VSMPDVELNL
K
S
P
K
heavy
2+
826.9186
1651.8227
21
25.0000
DDX54_CL02
Peptide
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LGPGRPLPTFPTSE
C
T
S
DVEPDTR
pr_gene_id: 79039
pr_gene_symbol: DDX54
pr_id: 6696_DDX54_S75_LGPGRPLPTFPTSEC[+57]TS[+80]DVEPDTR
pr_p100_base_peptide: LGPGRPLPTFPTSECTSDVEPDTR
pr_p100_cluster: CL02
pr_p100_gene_cluster_code: DDX54_CL02
pr_p100_modified_peptide_code: LGPGRPLPTFPTSEC[+57]TS[+80]DVEPDTR
pr_p100_original_probe_id: 6696_DDX54_S75
pr_p100_phosphosite: S75
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: Q8TDD1
0
2708.2153
LGPGRPLPTFPTSE
C
T
S
DVEPDTR
light
3+
903.7457
2708.2153
9
25.0000
LGPGRPLPTFPTSE
C
T
S
DVEPDTR
pr_gene_id: 79039
pr_gene_symbol: DDX54
pr_id: 6696_DDX54_S75_LGPGRPLPTFPTSEC[+57]TS[+80]DVEPDTR
pr_p100_base_peptide: LGPGRPLPTFPTSECTSDVEPDTR
pr_p100_cluster: CL02
pr_p100_gene_cluster_code: DDX54_CL02
pr_p100_modified_peptide_code: LGPGRPLPTFPTSEC[+57]TS[+80]DVEPDTR
pr_p100_original_probe_id: 6696_DDX54_S75
pr_p100_phosphosite: S75
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: Q8TDD1
0
2708.2153
LGPGRPLPTFPTSE
C
T
S
DVEPDT
R
heavy
3+
907.0818
2718.2236
9
25.0000
HSPC216_CL02
Peptide
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LPLVPE
S
PRR
pr_gene_id: 51530
pr_gene_symbol: ZC3HC1
pr_id: 1130_HSPC216_S321_LPLVPES[+80]PRR
pr_p100_base_peptide: LPLVPESPRR
pr_p100_cluster: CL02
pr_p100_gene_cluster_code: HSPC216_CL02
pr_p100_modified_peptide_code: LPLVPES[+80]PRR
pr_p100_original_probe_id: 1130_HSPC216_S321
pr_p100_phosphosite: S321
pr_probe_normalization_group: 1
pr_probe_suitability_manual: FALSE
pr_uniprot_id: Q86WB0
1
1242.6486
LPLVPE
S
PRR
light
2+
622.3316
1242.6486
20
25.0000
LPLVPE
S
PRR
pr_gene_id: 51530
pr_gene_symbol: ZC3HC1
pr_id: 1130_HSPC216_S321_LPLVPES[+80]PRR
pr_p100_base_peptide: LPLVPESPRR
pr_p100_cluster: CL02
pr_p100_gene_cluster_code: HSPC216_CL02
pr_p100_modified_peptide_code: LPLVPES[+80]PRR
pr_p100_original_probe_id: 1130_HSPC216_S321
pr_p100_phosphosite: S321
pr_probe_normalization_group: 1
pr_probe_suitability_manual: FALSE
pr_uniprot_id: Q86WB0
1
1242.6486
LPLVPE
S
P
R
R
heavy
2+
632.3398
1262.6651
20
25.0000
PFKF_CL03
Peptide
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CE
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DP
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S
FAGNLNTYKR
pr_gene_id: 5214
pr_gene_symbol: PFKP
pr_id: 3145_PFKF_S386_S[+80]FAGNLNTYKR
pr_p100_base_peptide: SFAGNLNTYKR
pr_p100_cluster: CL03
pr_p100_gene_cluster_code: PFKF_CL03
pr_p100_modified_peptide_code: S[+80]FAGNLNTYKR
pr_p100_original_probe_id: 3145_PFKF_S386
pr_p100_phosphosite: S386
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: Q01813
1
1349.6129
S
FAGNLNTYKR
light
2+
675.8137
1349.6129
11
25.0000
S
FAGNLNTYKR
pr_gene_id: 5214
pr_gene_symbol: PFKP
pr_id: 3145_PFKF_S386_S[+80]FAGNLNTYKR
pr_p100_base_peptide: SFAGNLNTYKR
pr_p100_cluster: CL03
pr_p100_gene_cluster_code: PFKF_CL03
pr_p100_modified_peptide_code: S[+80]FAGNLNTYKR
pr_p100_original_probe_id: 3145_PFKF_S386
pr_p100_phosphosite: S386
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: Q01813
1
1349.6129
S
FAGNLNTY
K
R
heavy
2+
684.8250
1367.6354
11
25.0000
TMSL3_CL03
Peptide
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S
DKPDMAEIEKFDK
pr_gene_id: 7114
pr_gene_symbol: TMSB4X
pr_id: 290_TMSL3_S2_S[+122]DKPDMAEIEKFDK
pr_p100_base_peptide: SDKPDMAEIEKFDK
pr_p100_cluster: CL03
pr_p100_gene_cluster_code: TMSL3_CL03
pr_p100_modified_peptide_code: S[+122]DKPDMAEIEKFDK
pr_p100_original_probe_id: 290_TMSL3_S2
pr_p100_phosphosite: S2
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: P62328
1
1773.7532
S
DKPDMAEIEKFDK
light
3+
592.2584
1773.7532
12
25.0000
S
DKPDMAEIEKFDK
pr_gene_id: 7114
pr_gene_symbol: TMSB4X
pr_id: 290_TMSL3_S2_S[+122]DKPDMAEIEKFDK
pr_p100_base_peptide: SDKPDMAEIEKFDK
pr_p100_cluster: CL03
pr_p100_gene_cluster_code: TMSL3_CL03
pr_p100_modified_peptide_code: S[+122]DKPDMAEIEKFDK
pr_p100_original_probe_id: 290_TMSL3_S2
pr_p100_phosphosite: S2
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: P62328
1
1773.7532
S
DKPDMAEIE
K
FD
K
heavy
3+
597.6012
1789.7816
12
25.0000
S
DKPD
M
AEIEKFDK
pr_gene_id: 7114
pr_gene_symbol: TMSB4X
pr_id: 290_TMSL3_S2_S[+122]DKPDM[+16]AEIEKFDK
pr_p100_base_peptide: SDKPDMAEIEKFDK
pr_p100_cluster: CL03
pr_p100_gene_cluster_code: TMSL3_CL03
pr_p100_modified_peptide_code: S[+122]DKPDM[+16]AEIEKFDK
pr_p100_original_probe_id: 290_TMSL3_S2
pr_p100_phosphosite: S2
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: P62328
1
1789.7481
S
DKPD
M
AEIEKFDK
light
3+
597.5900
1789.7481
15
25.0000
S
DKPD
M
AEIEKFDK
pr_gene_id: 7114
pr_gene_symbol: TMSB4X
pr_id: 290_TMSL3_S2_S[+122]DKPDM[+16]AEIEKFDK
pr_p100_base_peptide: SDKPDMAEIEKFDK
pr_p100_cluster: CL03
pr_p100_gene_cluster_code: TMSL3_CL03
pr_p100_modified_peptide_code: S[+122]DKPDM[+16]AEIEKFDK
pr_p100_original_probe_id: 290_TMSL3_S2
pr_p100_phosphosite: S2
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: P62328
1
1789.7481
S
DKPD
M
AEIE
K
FD
K
heavy
3+
602.9328
1805.7765
15
25.0000
AD029_CL04
Peptide
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QDD
S
PPRPIIGPALPPGFIK
pr_gene_id: 55425
pr_gene_symbol: KIAA1704
pr_id: 6423_AD029_S105_QDDS[+80]PPRPIIGPALPPGFIK
pr_p100_base_peptide: QDDSPPRPIIGPALPPGFIK
pr_p100_cluster: CL04
pr_p100_gene_cluster_code: AD029_CL04
pr_p100_modified_peptide_code: QDDS[+80]PPRPIIGPALPPGFIK
pr_p100_original_probe_id: 6423_AD029_S105
pr_p100_phosphosite: S105
pr_probe_normalization_group: 1
pr_probe_suitability_manual: FALSE
pr_uniprot_id: Q8IXQ4
0
2194.1188
QDD
S
PPRPIIGPALPPGFIK
light
3+
732.3802
2194.1188
16
25.0000
QDD
S
PPRPIIGPALPPGFIK
pr_gene_id: 55425
pr_gene_symbol: KIAA1704
pr_id: 6423_AD029_S105_QDDS[+80]PPRPIIGPALPPGFIK
pr_p100_base_peptide: QDDSPPRPIIGPALPPGFIK
pr_p100_cluster: CL04
pr_p100_gene_cluster_code: AD029_CL04
pr_p100_modified_peptide_code: QDDS[+80]PPRPIIGPALPPGFIK
pr_p100_original_probe_id: 6423_AD029_S105
pr_p100_phosphosite: S105
pr_probe_normalization_group: 1
pr_probe_suitability_manual: FALSE
pr_uniprot_id: Q8IXQ4
0
2194.1188
QDD
S
PPRPIIGPALPPGFI
K
heavy
3+
735.0516
2202.1330
16
25.0000
CDC2_CL04
Peptide
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VY
T
HEVVTLWYR
pr_gene_id: 983
pr_gene_symbol: CDC2
pr_id: 9285_CDC2_T161_VYT[+80]HEVVTLWYR
pr_p100_base_peptide: VYTHEVVTLWYR
pr_p100_cluster: CL04
pr_p100_gene_cluster_code: CDC2_CL04
pr_p100_modified_peptide_code: VYT[+80]HEVVTLWYR
pr_p100_original_probe_id: 9285_CDC2_T161
pr_p100_phosphosite: T161
pr_probe_normalization_group: 1
pr_probe_suitability_manual: FALSE
pr_uniprot_id: P06493
0
1644.7701
VY
T
HEVVTLWYR
light
3+
549.2640
1644.7701
8
25.0000
VY
T
HEVVTLWYR
pr_gene_id: 983
pr_gene_symbol: CDC2
pr_id: 9285_CDC2_T161_VYT[+80]HEVVTLWYR
pr_p100_base_peptide: VYTHEVVTLWYR
pr_p100_cluster: CL04
pr_p100_gene_cluster_code: CDC2_CL04
pr_p100_modified_peptide_code: VYT[+80]HEVVTLWYR
pr_p100_original_probe_id: 9285_CDC2_T161
pr_p100_phosphosite: T161
pr_probe_normalization_group: 1
pr_probe_suitability_manual: FALSE
pr_uniprot_id: P06493
0
1644.7701
VY
T
HEVVTLWY
R
heavy
3+
552.6001
1654.7784
8
25.0000
ATAD2_CL05
Peptide
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KPNIFYSGPA
S
PARPR
pr_gene_id: 29028
pr_gene_symbol: ATAD2
pr_id: 6108_ATAD2_S327_KPNIFYSGPAS[+80]PARPR
pr_p100_base_peptide: KPNIFYSGPASPARPR
pr_p100_cluster: CL05
pr_p100_gene_cluster_code: ATAD2_CL05
pr_p100_modified_peptide_code: KPNIFYSGPAS[+80]PARPR
pr_p100_original_probe_id: 6108_ATAD2_S327
pr_p100_phosphosite: S327
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: Q6PL18
0
1836.9036
KPNIFYSGPA
S
PARPR
light
3+
613.3085
1836.9036
22
25.0000
KPNIFYSGPA
S
PARPR
pr_gene_id: 29028
pr_gene_symbol: ATAD2
pr_id: 6108_ATAD2_S327_KPNIFYSGPAS[+80]PARPR
pr_p100_base_peptide: KPNIFYSGPASPARPR
pr_p100_cluster: CL05
pr_p100_gene_cluster_code: ATAD2_CL05
pr_p100_modified_peptide_code: KPNIFYSGPAS[+80]PARPR
pr_p100_original_probe_id: 6108_ATAD2_S327
pr_p100_phosphosite: S327
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: Q6PL18
0
1836.9036
KPNIFYSGPA
S
PARP
R
heavy
3+
616.6446
1846.9119
22
25.0000
BAT2D1_CL05
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AFGSGIDIKPG
T
PPIAGR
pr_gene_id: 23215
pr_gene_symbol: BAT2D1
pr_id: 8879_BAT2D1_T2675_AFGSGIDIKPGT[+80]PPIAGR
pr_p100_base_peptide: AFGSGIDIKPGTPPIAGR
pr_p100_cluster: CL05
pr_p100_gene_cluster_code: BAT2D1_CL05
pr_p100_modified_peptide_code: AFGSGIDIKPGT[+80]PPIAGR
pr_p100_original_probe_id: 8879_BAT2D1_T2675
pr_p100_phosphosite: T2675
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: Q9Y520
0
1832.9186
AFGSGIDIKPG
T
PPIAGR
light
3+
611.9801
1832.9186
25
25.0000
AFGSGIDIKPG
T
PPIAGR
pr_gene_id: 23215
pr_gene_symbol: BAT2D1
pr_id: 8879_BAT2D1_T2675_AFGSGIDIKPGT[+80]PPIAGR
pr_p100_base_peptide: AFGSGIDIKPGTPPIAGR
pr_p100_cluster: CL05
pr_p100_gene_cluster_code: BAT2D1_CL05
pr_p100_modified_peptide_code: AFGSGIDIKPGT[+80]PPIAGR
pr_p100_original_probe_id: 8879_BAT2D1_T2675
pr_p100_phosphosite: T2675
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: Q9Y520
0
1832.9186
AFGSGIDIKPG
T
PPIAG
R
heavy
3+
615.3162
1842.9269
25
25.0000