29 Jun 2020 07:33:40,133 INFO : Running LINCS pipeline on PSP for: LINCS_P100_DIA_Plate97_annotated_minimized_2020-06-29_10-24-12
29 Jun 2020 07:33:40,140 INFO : =======================================
29 Jun 2020 07:33:40,408 INFO : Starting to run task 'org.labkey.lincs.psp.LincsPspTask' at location 'webserver-high-priority'
29 Jun 2020 07:33:40,409 INFO : Running LINCS PSP pipeline for LINCS_P100_DIA_Plate97_annotated_minimized_2020-06-29_10-24-12
29 Jun 2020 07:33:40,410 INFO : Submitting job for runId: 89926, name: LINCS_P100_DIA_Plate97_annotated_minimized_2020-06-29_10-24-12
29 Jun 2020 07:33:40,414 INFO : Looking for existing job with name LINCS_P100_DIA_Plate97_annotated_minimized_2020-06-29_10-24-12
29 Jun 2020 07:33:40,801 INFO : PSP job name: LINCS_P100_DIA_Plate97_annotated_minimized_2020-06-29_10-24-12
29 Jun 2020 07:33:40,802 INFO : Sending JSON:
29 Jun 2020 07:33:40,803 INFO : {
"level 4": {"panorama": {
"method": "PUT",
"url": "https://panoramaweb.org/_webdav/LINCS/P100/%40files/GCT/LINCS_P100_DIA_Plate97_annotated_minimized_2020-06-29_10-24-12_LVL4.gct"
}},
"assay": "P100",
"name": "LINCS_P100_DIA_Plate97_annotated_minimized_2020-06-29_10-24-12",
"config": {"panorama": {
"method": "PUT",
"url": "https://panoramaweb.org/_webdav/LINCS/P100/%40files/GCT/LINCS_P100_DIA_Plate97_annotated_minimized_2020-06-29_10-24-12.cfg"
}},
"level 2": {"panorama": {
"method": "GET",
"url": "https://panoramaweb.org/LINCS/P100/lincs-runGCTReportApi.view?runId=89926&remote=true&reportName=GCT%20File%20P100"
}},
"level 3": {"panorama": {
"method": "PUT",
"url": "https://panoramaweb.org/_webdav/LINCS/P100/%40files/GCT/LINCS_P100_DIA_Plate97_annotated_minimized_2020-06-29_10-24-12_LVL3.gct"
}}
}
29 Jun 2020 07:33:40,804 INFO : Sending POST request to https://api.clue.io/api/psp
29 Jun 2020 07:33:41,234 INFO : Response code - 200
29 Jun 2020 07:33:41,235 INFO : Response from server: {"name":"LINCS_P100_DIA_Plate97_annotated_minimized_2020-06-29_10-24-12","assay":"P100","status":"Waiting_To_Download","id":"5ef9fbc4808f4100179b04b4","created":"2020-06-29T14:33:40.877Z","last_modified":"2020-06-29T14:33:40.877Z","level 2":{"panorama":{"method":"GET","url":"https://panoramaweb.org/LINCS/P100/lincs-runGCTReportApi.view?runId=89926&remote=true&reportName=GCT%20File%20P100"}},"level 3":{"panorama":{"method":"PUT","url":"https://panoramaweb.org/_webdav/LINCS/P100/%40files/GCT/LINCS_P100_DIA_Plate97_annotated_minimized_2020-06-29_10-24-12_LVL3.gct"}},"level 4":{"panorama":{"method":"PUT","url":"https://panoramaweb.org/_webdav/LINCS/P100/%40files/GCT/LINCS_P100_DIA_Plate97_annotated_minimized_2020-06-29_10-24-12_LVL4.gct"}},"config":{"panorama":{"method":"PUT","url":"https://panoramaweb.org/_webdav/LINCS/P100/%40files/GCT/LINCS_P100_DIA_Plate97_annotated_minimized_2020-06-29_10-24-12.cfg"}}}
29 Jun 2020 07:33:41,237 INFO : Sent POST request to https://api.clue.io/api/psp
29 Jun 2020 07:33:41,240 INFO : Checking status of job 5ef9fbc4808f4100179b04b4
29 Jun 2020 07:33:41,370 INFO : Status: Waiting_To_Download
29 Jun 2020 07:34:01,372 INFO : Checking status of job 5ef9fbc4808f4100179b04b4
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29 Jun 2020 07:57:03,951 INFO : Checking status of job 5ef9fbc4808f4100179b04b4
29 Jun 2020 07:57:04,296 INFO : Status: created LVL2 GCT
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29 Jun 2020 07:58:25,599 INFO : Status: created LVL2 GCT
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29 Jun 2020 07:59:26,647 INFO : Status: created LVL2 GCT
29 Jun 2020 07:59:46,649 INFO : Checking status of job 5ef9fbc4808f4100179b04b4
29 Jun 2020 07:59:46,930 INFO : Status: created LVL2 GCT
29 Jun 2020 08:00:06,933 INFO : Checking status of job 5ef9fbc4808f4100179b04b4
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29 Jun 2020 08:00:27,307 INFO : Checking status of job 5ef9fbc4808f4100179b04b4
29 Jun 2020 08:00:27,590 INFO : Status: created LVL2 GCT
29 Jun 2020 08:00:47,592 INFO : Checking status of job 5ef9fbc4808f4100179b04b4
29 Jun 2020 08:00:47,948 INFO : Status: created LVL2 GCT
29 Jun 2020 08:01:07,950 INFO : Checking status of job 5ef9fbc4808f4100179b04b4
29 Jun 2020 08:01:08,733 INFO : Status: created LVL 3 GCT
29 Jun 2020 08:01:28,734 INFO : Checking status of job 5ef9fbc4808f4100179b04b4
29 Jun 2020 08:01:29,025 INFO : Status: POUR : succeeded in uploading all GCTs to Panorama
29 Jun 2020 08:01:29,026 INFO : PSP job completed with status: POUR : succeeded in uploading all GCTs to Panorama
29 Jun 2020 08:01:29,027 INFO : Finished running LINCS PSP pipeline.
29 Jun 2020 08:01:29,028 INFO : Successfully completed task 'org.labkey.lincs.psp.LincsPspTask'