Skyline document import - LINCS_P100_DIA_Plate97_annotated_minimized_2020-06-29_10-24-12.sky.zip

P100

Job Status

Created: 2020-06-29 07:29:26
Modified: 2020-06-29 07:33:40
Email: karen@broadinstitute.org
Status: COMPLETE
Info:
Description: Skyline document import - LINCS_P100_DIA_Plate97_annotated_minimized_2020-06-29_10-24-12.sky.zip
File Path: /data/labkey/files/LINCS/P100/@files/LINCS_P100_DIA_Plate97_annotated_minimized_2020-06-29_10-24-12.sky_2020-06-29_07-29-26.log
Files: LINCS_P100_DIA_Plate97_annotated_minimized_2020-06-29_10-24-12.sky_2020-06-29_07-29-26.log

Log File


29 Jun 2020 07:29:26,856 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
29 Jun 2020 07:29:26,870 INFO : Starting to import Skyline document from LINCS_P100_DIA_Plate97_annotated_minimized_2020-06-29_10-24-12.sky.zip
29 Jun 2020 07:29:26,916 INFO : Expanding P100_DIA_CE30_PurePeptides.blib
29 Jun 2020 07:29:26,970 INFO : Expanding LINCS_P100_DIA_Plate97_annotated_minimized.skyd
29 Jun 2020 07:29:31,166 INFO : Expanding LINCS_P100_DIA_Plate97_annotated_minimized.sky.view
29 Jun 2020 07:29:31,177 INFO : Expanding LINCS_P100_DIA_Plate97_annotated_minimized.sky
29 Jun 2020 07:29:31,670 WARN : The version of this Skyline document is 20.13. This is newer than the highest supported version 4.1
29 Jun 2020 07:29:31,691 INFO : 1% Done
29 Jun 2020 07:29:37,242 INFO : Inserting NANS_CL01
29 Jun 2020 07:29:37,314 INFO : 2% Done
29 Jun 2020 07:29:39,758 INFO : Inserting AHNAK_CL01
29 Jun 2020 07:29:43,156 INFO : Inserting DDX54_CL02
29 Jun 2020 07:29:43,184 INFO : 3% Done
29 Jun 2020 07:29:44,913 INFO : Inserting HSPC216_CL02
29 Jun 2020 07:29:44,945 INFO : 4% Done
29 Jun 2020 07:29:47,589 INFO : Inserting PFKF_CL03
29 Jun 2020 07:29:47,608 INFO : 5% Done
29 Jun 2020 07:29:49,508 INFO : Inserting TMSL3_CL03
29 Jun 2020 07:29:49,553 INFO : 6% Done
29 Jun 2020 07:29:51,696 INFO : 7% Done
29 Jun 2020 07:29:54,232 INFO : Inserting AD029_CL04
29 Jun 2020 07:29:54,260 INFO : 8% Done
29 Jun 2020 07:29:57,095 INFO : Inserting CDC2_CL04
29 Jun 2020 07:29:58,297 INFO : Inserting ATAD2_CL05
29 Jun 2020 07:29:58,347 INFO : 10% Done
29 Jun 2020 07:30:01,610 INFO : Inserting BAT2D1_CL05
29 Jun 2020 07:30:01,658 INFO : 11% Done
29 Jun 2020 07:30:04,850 INFO : Inserting AGS1_CL06
29 Jun 2020 07:30:06,321 INFO : Inserting A2D_CL07
29 Jun 2020 07:30:06,358 INFO : 12% Done
29 Jun 2020 07:30:07,223 INFO : Inserting ZNF672_CL07
29 Jun 2020 07:30:07,245 INFO : 14% Done
29 Jun 2020 07:30:08,585 INFO : Inserting ABI1_CL08
29 Jun 2020 07:30:08,608 INFO : 15% Done
29 Jun 2020 07:30:12,045 INFO : Inserting FOSL2_CL08
29 Jun 2020 07:30:12,077 INFO : 16% Done
29 Jun 2020 07:30:13,934 INFO : 17% Done
29 Jun 2020 07:30:16,835 INFO : Inserting C17orf85_CL09
29 Jun 2020 07:30:16,886 INFO : 18% Done
29 Jun 2020 07:30:20,313 INFO : Inserting EPLIN_CL09
29 Jun 2020 07:30:20,351 INFO : 19% Done
29 Jun 2020 07:30:23,767 INFO : Inserting BAF155_CL10
29 Jun 2020 07:30:23,800 INFO : 21% Done
29 Jun 2020 07:30:26,982 INFO : Inserting FUBP2_CL10
29 Jun 2020 07:30:27,010 INFO : 22% Done
29 Jun 2020 07:30:30,443 INFO : Inserting MAP3K2_CL11
29 Jun 2020 07:30:30,534 INFO : 23% Done
29 Jun 2020 07:30:34,250 INFO : Inserting FAS_CL12
29 Jun 2020 07:30:34,277 INFO : 25% Done
29 Jun 2020 07:30:38,753 INFO : Inserting ARM2_CL13
29 Jun 2020 07:30:39,539 INFO : Inserting C9orf88_CL14
29 Jun 2020 07:30:39,595 INFO : 26% Done
29 Jun 2020 07:30:43,303 INFO : Inserting ISPK1_CL14
29 Jun 2020 07:30:43,340 INFO : 28% Done
29 Jun 2020 07:30:46,423 INFO : Inserting RBM14_CL15
29 Jun 2020 07:30:47,861 INFO : Inserting KIAA0701_CL15
29 Jun 2020 07:30:49,252 INFO : Inserting RBM17_CL16
29 Jun 2020 07:30:49,283 INFO : 30% Done
29 Jun 2020 07:30:52,199 INFO : Inserting SLC38A1_CL16
29 Jun 2020 07:30:53,309 INFO : Inserting NOC2L_CL17
29 Jun 2020 07:30:54,674 INFO : Inserting RPL12_CL17
29 Jun 2020 07:30:54,710 INFO : 31% Done
29 Jun 2020 07:30:57,091 INFO : Inserting DDX48_CL18
29 Jun 2020 07:30:57,113 INFO : 32% Done
29 Jun 2020 07:31:01,283 INFO : Inserting HCA90_CL18
29 Jun 2020 07:31:01,321 INFO : 33% Done
29 Jun 2020 07:31:03,809 INFO : Inserting CAT53_CL19
29 Jun 2020 07:31:03,842 INFO : 34% Done
29 Jun 2020 07:31:07,738 INFO : Inserting EPLIN_CL19
29 Jun 2020 07:31:07,778 INFO : 35% Done
29 Jun 2020 07:31:09,978 INFO : Inserting HBXAP_CL21
29 Jun 2020 07:31:10,015 INFO : 37% Done
29 Jun 2020 07:31:13,389 INFO : Inserting DCAF1_CL22
29 Jun 2020 07:31:13,408 INFO : 38% Done
29 Jun 2020 07:31:14,595 INFO : Inserting CDW2_CL22
29 Jun 2020 07:31:16,089 INFO : Inserting ANLN_CL23
29 Jun 2020 07:31:18,477 INFO : Inserting OCIA_CL23
29 Jun 2020 07:31:18,498 INFO : 39% Done
29 Jun 2020 07:31:20,235 INFO : Inserting FAM76B_CL24
29 Jun 2020 07:31:20,280 INFO : 40% Done
29 Jun 2020 07:31:23,117 INFO : Inserting HAT1_CL25
29 Jun 2020 07:31:23,731 INFO : Inserting BRAF_CL26
29 Jun 2020 07:31:23,770 INFO : 42% Done
29 Jun 2020 07:31:26,286 INFO : Inserting DYRK_CL27
29 Jun 2020 07:31:27,593 INFO : Inserting LRWD1_CL27
29 Jun 2020 07:31:27,630 INFO : 44% Done
29 Jun 2020 07:31:31,557 INFO : Inserting ALS2_CL28
29 Jun 2020 07:31:32,608 INFO : Inserting BRD4_CL29
29 Jun 2020 07:31:32,624 INFO : 45% Done
29 Jun 2020 07:31:33,991 INFO : Inserting ZC3H14_CL29
29 Jun 2020 07:31:34,026 INFO : 46% Done
29 Jun 2020 07:31:38,094 INFO : Inserting KIF4_CL30
29 Jun 2020 07:31:39,408 INFO : Inserting MAP3K7_CL30
29 Jun 2020 07:31:39,431 INFO : 48% Done
29 Jun 2020 07:31:41,673 INFO : Inserting KIAA0722_CL31
29 Jun 2020 07:31:43,981 INFO : Inserting PAK2_CL31
29 Jun 2020 07:31:44,001 INFO : 49% Done
29 Jun 2020 07:31:45,968 INFO : Inserting LAP2_CL32
29 Jun 2020 07:31:45,986 INFO : 50% Done
29 Jun 2020 07:31:47,553 INFO : Inserting BAT2_CL33
29 Jun 2020 07:31:47,583 INFO : 51% Done
29 Jun 2020 07:31:50,722 INFO : Inserting My038_CL33
29 Jun 2020 07:31:50,756 INFO : 52% Done
29 Jun 2020 07:31:53,828 INFO : Inserting EMK1_CL34
29 Jun 2020 07:31:54,634 INFO : Inserting WDR20_CL34
29 Jun 2020 07:31:54,719 INFO : 54% Done
29 Jun 2020 07:31:57,200 INFO : Inserting THRAP3_CL35
29 Jun 2020 07:31:59,461 INFO : Inserting CAIN_CL35
29 Jun 2020 07:31:59,530 INFO : 55% Done
29 Jun 2020 07:32:02,233 INFO : Inserting GPATC8_CL37
29 Jun 2020 07:32:02,311 INFO : 56% Done
29 Jun 2020 07:32:03,862 INFO : Inserting RP11-373M8.1-002_CL37
29 Jun 2020 07:32:03,943 INFO : 57% Done
29 Jun 2020 07:32:06,008 INFO : Inserting KIAA1734_CL38
29 Jun 2020 07:32:06,068 INFO : 58% Done
29 Jun 2020 07:32:06,809 INFO : Inserting MAP4_CL38
29 Jun 2020 07:32:09,732 INFO : Inserting KIAA0217_CL39
29 Jun 2020 07:32:09,767 INFO : 60% Done
29 Jun 2020 07:32:12,251 INFO : Inserting CTG26_CL40
29 Jun 2020 07:32:12,273 INFO : 61% Done
29 Jun 2020 07:32:14,277 INFO : Inserting KIAA1991_CL40
29 Jun 2020 07:32:14,345 INFO : 62% Done
29 Jun 2020 07:32:16,259 INFO : Inserting DBP2_CL41
29 Jun 2020 07:32:17,872 INFO : Inserting SRRM2_CL41
29 Jun 2020 07:32:17,908 INFO : 63% Done
29 Jun 2020 07:32:21,394 INFO : Inserting KIAA1321_CL42
29 Jun 2020 07:32:21,416 INFO : 64% Done
29 Jun 2020 07:32:23,340 INFO : Inserting MAPKAPK1A_CL43
29 Jun 2020 07:32:24,491 INFO : 65% Done
29 Jun 2020 07:32:25,892 INFO : Inserting C22orf9_CL43
29 Jun 2020 07:32:25,951 INFO : 66% Done
29 Jun 2020 07:32:27,318 INFO : Inserting KIAA1844_CL44
29 Jun 2020 07:32:30,106 INFO : Inserting CCNYL1_CL45
29 Jun 2020 07:32:30,141 INFO : 67% Done
29 Jun 2020 07:32:31,874 INFO : Inserting PDK1_CL46
29 Jun 2020 07:32:31,939 INFO : 68% Done
29 Jun 2020 07:32:33,808 INFO : Inserting OK/SW-cl.2_CL46
29 Jun 2020 07:32:34,848 INFO : Inserting PLEC1_CL47
29 Jun 2020 07:32:34,911 INFO : 69% Done
29 Jun 2020 07:32:37,125 INFO : Inserting CASC3_CL48
29 Jun 2020 07:32:37,200 INFO : 70% Done
29 Jun 2020 07:32:38,850 INFO : Inserting BAT2D1_CL48
29 Jun 2020 07:32:40,318 INFO : Inserting LAP2_CL49
29 Jun 2020 07:32:40,363 INFO : 71% Done
29 Jun 2020 07:32:43,257 INFO : Inserting TB7_CL49
29 Jun 2020 07:32:43,322 INFO : 72% Done
29 Jun 2020 07:32:45,156 INFO : Inserting IQGAP3_CL50
29 Jun 2020 07:32:45,215 INFO : 73% Done
29 Jun 2020 07:32:46,157 INFO : Inserting NFATC2IP_CL50
29 Jun 2020 07:32:48,478 INFO : Inserting BAF45D_CL51
29 Jun 2020 07:32:48,512 INFO : 74% Done
29 Jun 2020 07:32:49,740 INFO : Inserting PP8000_CL51
29 Jun 2020 07:32:53,004 INFO : Inserting HSPC075_CL52
29 Jun 2020 07:32:53,043 INFO : 76% Done
29 Jun 2020 07:32:55,593 INFO : Inserting C13orf8_CL52
29 Jun 2020 07:32:55,634 INFO : 77% Done
29 Jun 2020 07:32:58,564 INFO : Inserting JUND_CL53
29 Jun 2020 07:32:58,737 INFO : 78% Done
29 Jun 2020 07:33:00,639 INFO : Inserting CLTA_CL53
29 Jun 2020 07:33:01,770 INFO : Inserting KIAA0035_CL54
29 Jun 2020 07:33:03,507 INFO : Inserting AP1GBP1_CL55
29 Jun 2020 07:33:03,545 INFO : 79% Done
29 Jun 2020 07:33:05,998 INFO : Inserting CIN85_CL55
29 Jun 2020 07:33:06,015 INFO : 80% Done
29 Jun 2020 07:33:07,462 INFO : Done parsing Skyline document.
29 Jun 2020 07:33:07,500 INFO : No group comparisons found.
29 Jun 2020 07:33:07,501 INFO : Calculating calibration curves
29 Jun 2020 07:33:08,329 INFO : 81% Done
29 Jun 2020 07:33:09,830 INFO : 82% Done
29 Jun 2020 07:33:11,049 INFO : 83% Done
29 Jun 2020 07:33:12,211 INFO : 84% Done
29 Jun 2020 07:33:13,778 INFO : 85% Done
29 Jun 2020 07:33:15,740 INFO : 86% Done
29 Jun 2020 07:33:17,124 INFO : 87% Done
29 Jun 2020 07:33:18,749 INFO : 88% Done
29 Jun 2020 07:33:19,888 INFO : 89% Done
29 Jun 2020 07:33:20,512 INFO : 90% Done
29 Jun 2020 07:33:21,724 INFO : 91% Done
29 Jun 2020 07:33:23,329 INFO : 92% Done
29 Jun 2020 07:33:25,047 INFO : 93% Done
29 Jun 2020 07:33:26,802 INFO : 94% Done
29 Jun 2020 07:33:28,905 INFO : 95% Done
29 Jun 2020 07:33:31,259 INFO : 96% Done
29 Jun 2020 07:33:33,042 INFO : 97% Done
29 Jun 2020 07:33:34,865 INFO : 98% Done
29 Jun 2020 07:33:35,607 INFO : Done calculating calibration curves.
29 Jun 2020 07:33:35,613 INFO : Creating and populating temp tables for Proportion values
29 Jun 2020 07:33:36,058 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
29 Jun 2020 07:33:38,458 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
29 Jun 2020 07:33:39,605 INFO : Cleaning up temp tables
29 Jun 2020 07:33:40,073 INFO : Completed import of Skyline document from LINCS_P100_DIA_Plate97_annotated_minimized_2020-06-29_10-24-12.sky.zip
29 Jun 2020 07:33:40,080 INFO : 100% Done
29 Jun 2020 07:33:40,203 INFO : LINCS: Queued job Id 89571 for submitting POST request to PSP.
29 Jun 2020 07:33:40,336 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'