Skyline document import - LINCS_P100_DIA_Plate96_annotated_minimized_2020-06-11_19-02-30.sky.zip

P100

Job Status

Created: 2020-06-11 16:12:35
Modified: 2020-06-11 16:24:32
Email: karen@broadinstitute.org
Status: COMPLETE
Info:
Description: Skyline document import - LINCS_P100_DIA_Plate96_annotated_minimized_2020-06-11_19-02-30.sky.zip
File Path: /data/labkey/files/LINCS/P100/@files/LINCS_P100_DIA_Plate96_annotated_minimized_2020-06-11_19-02-30.sky_2020-06-11_16-12-34.log
Files: LINCS_P100_DIA_Plate96_annotated_minimized_2020-06-11_19-02-30.sky_2020-06-11_16-12-34.log
Completed Runs: LINCS_P100_DIA_Plate96_annotated_minimized_2020-06-11_19-02-30.sky.zip

Log File


11 Jun 2020 16:20:07,319 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
11 Jun 2020 16:20:07,345 INFO : Starting to import Skyline document from LINCS_P100_DIA_Plate96_annotated_minimized_2020-06-11_19-02-30.sky.zip
11 Jun 2020 16:20:07,363 INFO : Expanding P100_DIA_CE30_PurePeptides.blib
11 Jun 2020 16:20:07,409 INFO : Expanding LINCS_P100_DIA_Plate96_annotated_minimized.skyd
11 Jun 2020 16:20:12,626 INFO : Expanding LINCS_P100_DIA_Plate96_annotated_minimized.sky.view
11 Jun 2020 16:20:12,879 INFO : Expanding LINCS_P100_DIA_Plate96_annotated_minimized.sky
11 Jun 2020 16:20:13,374 WARN : The version of this Skyline document is 20.12. This is newer than the highest supported version 4.1
11 Jun 2020 16:20:13,396 INFO : 1% Done
11 Jun 2020 16:20:18,603 INFO : Inserting NANS_CL01
11 Jun 2020 16:20:18,746 INFO : 2% Done
11 Jun 2020 16:20:21,610 INFO : Inserting AHNAK_CL01
11 Jun 2020 16:20:21,773 INFO : 3% Done
11 Jun 2020 16:20:25,084 INFO : Inserting DDX54_CL02
11 Jun 2020 16:20:26,340 INFO : Inserting HSPC216_CL02
11 Jun 2020 16:20:26,391 INFO : 5% Done
11 Jun 2020 16:20:30,031 INFO : Inserting PFKF_CL03
11 Jun 2020 16:20:30,075 INFO : 6% Done
11 Jun 2020 16:20:32,292 INFO : Inserting TMSL3_CL03
11 Jun 2020 16:20:34,051 INFO : 7% Done
11 Jun 2020 16:20:36,838 INFO : Inserting AD029_CL04
11 Jun 2020 16:20:37,026 INFO : 9% Done
11 Jun 2020 16:20:39,814 INFO : Inserting CDC2_CL04
11 Jun 2020 16:20:40,988 INFO : Inserting ATAD2_CL05
11 Jun 2020 16:20:41,024 INFO : 10% Done
11 Jun 2020 16:20:43,094 INFO : Inserting BAT2D1_CL05
11 Jun 2020 16:20:43,137 INFO : 11% Done
11 Jun 2020 16:20:46,466 INFO : Inserting AGS1_CL06
11 Jun 2020 16:20:48,510 INFO : Inserting A2D_CL07
11 Jun 2020 16:20:48,521 INFO : 12% Done
11 Jun 2020 16:20:49,876 INFO : Inserting ZNF672_CL07
11 Jun 2020 16:20:49,932 INFO : 14% Done
11 Jun 2020 16:20:52,572 INFO : Inserting ABI1_CL08
11 Jun 2020 16:20:52,613 INFO : 15% Done
11 Jun 2020 16:20:56,925 INFO : Inserting FOSL2_CL08
11 Jun 2020 16:20:56,964 INFO : 16% Done
11 Jun 2020 16:21:01,135 INFO : Inserting C17orf85_CL09
11 Jun 2020 16:21:01,172 INFO : 17% Done
11 Jun 2020 16:21:03,711 INFO : Inserting EPLIN_CL09
11 Jun 2020 16:21:03,766 INFO : 18% Done
11 Jun 2020 16:21:07,411 INFO : Inserting BAF155_CL10
11 Jun 2020 16:21:07,488 INFO : 20% Done
11 Jun 2020 16:21:10,772 INFO : Inserting FUBP2_CL10
11 Jun 2020 16:21:10,804 INFO : 21% Done
11 Jun 2020 16:21:14,019 INFO : Inserting MAP3K2_CL11
11 Jun 2020 16:21:14,060 INFO : 22% Done
11 Jun 2020 16:21:18,392 INFO : Inserting FAS_CL12
11 Jun 2020 16:21:18,454 INFO : 23% Done
11 Jun 2020 16:21:21,234 INFO : 24% Done
11 Jun 2020 16:21:23,409 INFO : Inserting ARM2_CL13
11 Jun 2020 16:21:24,398 INFO : Inserting C9orf88_CL14
11 Jun 2020 16:21:24,460 INFO : 26% Done
11 Jun 2020 16:21:28,625 INFO : Inserting ISPK1_CL14
11 Jun 2020 16:21:28,673 INFO : 27% Done
11 Jun 2020 16:21:31,998 INFO : Inserting RBM14_CL15
11 Jun 2020 16:21:33,205 INFO : Inserting KIAA0701_CL15
11 Jun 2020 16:21:33,271 INFO : 28% Done
11 Jun 2020 16:21:34,712 INFO : Inserting RBM17_CL16
11 Jun 2020 16:21:34,752 INFO : 29% Done
11 Jun 2020 16:21:37,926 INFO : Inserting SLC38A1_CL16
11 Jun 2020 16:21:37,956 INFO : 30% Done
11 Jun 2020 16:21:39,043 INFO : Inserting NOC2L_CL17
11 Jun 2020 16:21:40,232 INFO : Inserting RPL12_CL17
11 Jun 2020 16:21:42,760 INFO : Inserting DDX48_CL18
11 Jun 2020 16:21:42,818 INFO : 31% Done
11 Jun 2020 16:21:46,124 INFO : Inserting HCA90_CL18
11 Jun 2020 16:21:46,138 INFO : 32% Done
11 Jun 2020 16:21:48,544 INFO : Inserting CAT53_CL19
11 Jun 2020 16:21:48,593 INFO : 34% Done
11 Jun 2020 16:21:50,956 INFO : Inserting EPLIN_CL19
11 Jun 2020 16:21:52,981 INFO : Inserting HBXAP_CL21
11 Jun 2020 16:21:53,086 INFO : 35% Done
11 Jun 2020 16:21:56,193 INFO : Inserting DCAF1_CL22
11 Jun 2020 16:21:56,219 INFO : 36% Done
11 Jun 2020 16:21:57,203 INFO : Inserting CDW2_CL22
11 Jun 2020 16:21:57,212 INFO : 37% Done
11 Jun 2020 16:21:58,218 INFO : Inserting ANLN_CL23
11 Jun 2020 16:22:00,348 INFO : Inserting OCIA_CL23
11 Jun 2020 16:22:02,082 INFO : Inserting FAM76B_CL24
11 Jun 2020 16:22:02,121 INFO : 38% Done
11 Jun 2020 16:22:04,402 INFO : Inserting HAT1_CL25
11 Jun 2020 16:22:04,728 INFO : Inserting BRAF_CL26
11 Jun 2020 16:22:04,754 INFO : 40% Done
11 Jun 2020 16:22:07,758 INFO : Inserting DYRK_CL27
11 Jun 2020 16:22:09,235 INFO : Inserting LRWD1_CL27
11 Jun 2020 16:22:09,337 INFO : 42% Done
11 Jun 2020 16:22:13,520 INFO : Inserting ALS2_CL28
11 Jun 2020 16:22:14,547 INFO : Inserting BRD4_CL29
11 Jun 2020 16:22:14,606 INFO : 43% Done
11 Jun 2020 16:22:16,337 INFO : Inserting ZC3H14_CL29
11 Jun 2020 16:22:16,416 INFO : 45% Done
11 Jun 2020 16:22:20,844 INFO : Inserting KIF4_CL30
11 Jun 2020 16:22:20,897 INFO : 46% Done
11 Jun 2020 16:22:22,579 INFO : Inserting MAP3K7_CL30
11 Jun 2020 16:22:25,092 INFO : Inserting KIAA0722_CL31
11 Jun 2020 16:22:26,710 INFO : Inserting PAK2_CL31
11 Jun 2020 16:22:26,734 INFO : 47% Done
11 Jun 2020 16:22:28,713 INFO : Inserting LAP2_CL32
11 Jun 2020 16:22:28,732 INFO : 48% Done
11 Jun 2020 16:22:30,319 INFO : Inserting BAT2_CL33
11 Jun 2020 16:22:30,387 INFO : 50% Done
11 Jun 2020 16:22:33,891 INFO : Inserting My038_CL33
11 Jun 2020 16:22:33,958 INFO : 51% Done
11 Jun 2020 16:22:37,250 INFO : Inserting EMK1_CL34
11 Jun 2020 16:22:38,102 INFO : Inserting WDR20_CL34
11 Jun 2020 16:22:38,184 INFO : 52% Done
11 Jun 2020 16:22:40,708 INFO : Inserting THRAP3_CL35
11 Jun 2020 16:22:40,731 INFO : 53% Done
11 Jun 2020 16:22:43,303 INFO : Inserting CAIN_CL35
11 Jun 2020 16:22:43,346 INFO : 54% Done
11 Jun 2020 16:22:46,231 INFO : Inserting GPATC8_CL37
11 Jun 2020 16:22:46,276 INFO : 55% Done
11 Jun 2020 16:22:47,749 INFO : Inserting RP11-373M8.1-002_CL37
11 Jun 2020 16:22:47,783 INFO : 56% Done
11 Jun 2020 16:22:50,911 INFO : Inserting KIAA1734_CL38
11 Jun 2020 16:22:51,787 INFO : Inserting MAP4_CL38
11 Jun 2020 16:22:51,829 INFO : 58% Done
11 Jun 2020 16:22:54,972 INFO : Inserting KIAA0217_CL39
11 Jun 2020 16:22:55,017 INFO : 59% Done
11 Jun 2020 16:22:57,587 INFO : Inserting CTG26_CL40
11 Jun 2020 16:22:57,624 INFO : 60% Done
11 Jun 2020 16:22:59,662 INFO : Inserting KIAA1991_CL40
11 Jun 2020 16:22:59,738 INFO : 61% Done
11 Jun 2020 16:23:01,749 INFO : Inserting DBP2_CL41
11 Jun 2020 16:23:03,410 INFO : Inserting SRRM2_CL41
11 Jun 2020 16:23:03,481 INFO : 62% Done
11 Jun 2020 16:23:07,221 INFO : Inserting KIAA1321_CL42
11 Jun 2020 16:23:07,278 INFO : 63% Done
11 Jun 2020 16:23:09,207 INFO : Inserting MAPKAPK1A_CL43
11 Jun 2020 16:23:09,240 INFO : 64% Done
11 Jun 2020 16:23:12,448 INFO : Inserting C22orf9_CL43
11 Jun 2020 16:23:12,470 INFO : 65% Done
11 Jun 2020 16:23:13,860 INFO : Inserting KIAA1844_CL44
11 Jun 2020 16:23:13,892 INFO : 66% Done
11 Jun 2020 16:23:17,297 INFO : Inserting CCNYL1_CL45
11 Jun 2020 16:23:17,367 INFO : 67% Done
11 Jun 2020 16:23:19,158 INFO : Inserting PDK1_CL46
11 Jun 2020 16:23:19,233 INFO : 68% Done
11 Jun 2020 16:23:21,172 INFO : Inserting OK/SW-cl.2_CL46
11 Jun 2020 16:23:22,447 INFO : Inserting PLEC1_CL47
11 Jun 2020 16:23:24,468 INFO : Inserting CASC3_CL48
11 Jun 2020 16:23:24,497 INFO : 69% Done
11 Jun 2020 16:23:26,059 INFO : Inserting BAT2D1_CL48
11 Jun 2020 16:23:26,086 INFO : 70% Done
11 Jun 2020 16:23:27,666 INFO : Inserting LAP2_CL49
11 Jun 2020 16:23:27,697 INFO : 71% Done
11 Jun 2020 16:23:30,507 INFO : Inserting TB7_CL49
11 Jun 2020 16:23:30,541 INFO : 72% Done
11 Jun 2020 16:23:32,496 INFO : Inserting IQGAP3_CL50
11 Jun 2020 16:23:33,598 INFO : Inserting NFATC2IP_CL50
11 Jun 2020 16:23:33,633 INFO : 73% Done
11 Jun 2020 16:23:35,663 INFO : Inserting BAF45D_CL51
11 Jun 2020 16:23:36,767 INFO : Inserting PP8000_CL51
11 Jun 2020 16:23:36,841 INFO : 74% Done
11 Jun 2020 16:23:40,004 INFO : Inserting HSPC075_CL52
11 Jun 2020 16:23:40,050 INFO : 75% Done
11 Jun 2020 16:23:42,727 INFO : Inserting C13orf8_CL52
11 Jun 2020 16:23:42,779 INFO : 77% Done
11 Jun 2020 16:23:45,808 INFO : Inserting JUND_CL53
11 Jun 2020 16:23:45,848 INFO : 78% Done
11 Jun 2020 16:23:47,662 INFO : Inserting CLTA_CL53
11 Jun 2020 16:23:48,931 INFO : Inserting KIAA0035_CL54
11 Jun 2020 16:23:50,739 INFO : Inserting AP1GBP1_CL55
11 Jun 2020 16:23:50,763 INFO : 79% Done
11 Jun 2020 16:23:53,253 INFO : Inserting CIN85_CL55
11 Jun 2020 16:23:53,295 INFO : 80% Done
11 Jun 2020 16:23:54,991 INFO : Done parsing Skyline document.
11 Jun 2020 16:23:55,046 INFO : No group comparisons found.
11 Jun 2020 16:23:55,047 INFO : Calculating calibration curves
11 Jun 2020 16:23:55,968 INFO : 81% Done
11 Jun 2020 16:23:57,712 INFO : 82% Done
11 Jun 2020 16:23:58,992 INFO : 83% Done
11 Jun 2020 16:24:00,161 INFO : 84% Done
11 Jun 2020 16:24:01,744 INFO : 85% Done
11 Jun 2020 16:24:03,461 INFO : 86% Done
11 Jun 2020 16:24:04,916 INFO : 87% Done
11 Jun 2020 16:24:06,729 INFO : 88% Done
11 Jun 2020 16:24:08,293 INFO : 89% Done
11 Jun 2020 16:24:09,833 INFO : 90% Done
11 Jun 2020 16:24:11,441 INFO : 91% Done
11 Jun 2020 16:24:13,123 INFO : 92% Done
11 Jun 2020 16:24:14,905 INFO : 93% Done
11 Jun 2020 16:24:16,788 INFO : 94% Done
11 Jun 2020 16:24:19,073 INFO : 95% Done
11 Jun 2020 16:24:21,327 INFO : 96% Done
11 Jun 2020 16:24:23,287 INFO : 97% Done
11 Jun 2020 16:24:25,267 INFO : 98% Done
11 Jun 2020 16:24:26,140 INFO : Done calculating calibration curves.
11 Jun 2020 16:24:26,143 INFO : Creating and populating temp tables for Proportion values
11 Jun 2020 16:24:26,605 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
11 Jun 2020 16:24:30,262 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
11 Jun 2020 16:24:31,867 INFO : Cleaning up temp tables
11 Jun 2020 16:24:32,262 INFO : Completed import of Skyline document from LINCS_P100_DIA_Plate96_annotated_minimized_2020-06-11_19-02-30.sky.zip
11 Jun 2020 16:24:32,267 INFO : 100% Done
11 Jun 2020 16:24:32,650 INFO : LINCS: Queued job Id 88556 for submitting POST request to PSP.
11 Jun 2020 16:24:32,786 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'