Skyline document import - LINCS_P100_DIA_Plate29_annotated_minimized_2020-05-18_18-50-11.sky.zip

P100

Job Status

Created: 2020-05-18 15:56:44
Modified: 2020-06-01 16:07:27
Email: karen@broadinstitute.org
Status: COMPLETE
Info:
Description: Skyline document import - LINCS_P100_DIA_Plate29_annotated_minimized_2020-05-18_18-50-11.sky.zip
File Path: /data/labkey/files/LINCS/P100/@files/LINCS_P100_DIA_Plate29_annotated_minimized_2020-05-18_18-50-11.sky_2020-05-18_15-56-43.log
Files: LINCS_P100_DIA_Plate29_annotated_minimized_2020-05-18_18-50-11.sky_2020-05-18_15-56-43.log
Completed Runs: LINCS_P100_DIA_Plate29_annotated_minimized_2020-05-18_18-50-11.sky.zip

Log File


18 May 2020 15:56:44,270 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
18 May 2020 15:56:45,873 INFO : Created temp file because input is from cloud: s3://s3.amazonaws.com/mc-panoramaweb/container628/LINCS_P100_DIA_Plate29_annotated_minimized_2020-05-18_18-50-11.sky.zip
18 May 2020 15:56:45,874 INFO : Starting to import Skyline document from LINCS_P100_DIA_Plate29_annotated_minimized_2020-05-18_18-50-11.sky.zip
18 May 2020 15:56:45,874 INFO : Expanding P100_DIA_CE30_PurePeptides.blib
18 May 2020 15:56:45,876 INFO : Expanding LINCS_P100_DIA_Plate29_annotated_minimized.skyd
18 May 2020 15:56:46,490 INFO : Expanding LINCS_P100_DIA_Plate29_annotated_minimized.sky.view
18 May 2020 15:56:46,491 INFO : Expanding LINCS_P100_DIA_Plate29_annotated_minimized.sky
18 May 2020 15:56:46,585 WARN : The version of this Skyline document is 20.11. This is newer than the highest supported version 4.1
18 May 2020 15:56:46,594 INFO : 2% Done
18 May 2020 15:56:50,962 INFO : Inserting NANS_CL01
18 May 2020 15:56:52,073 INFO : Inserting AHNAK_CL01
18 May 2020 15:56:53,184 INFO : Inserting DDX54_CL02
18 May 2020 15:56:53,226 INFO : 3% Done
18 May 2020 15:56:54,214 INFO : Inserting HSPC216_CL02
18 May 2020 15:56:54,243 INFO : 4% Done
18 May 2020 15:56:55,792 INFO : Inserting PFKF_CL03
18 May 2020 15:56:55,880 INFO : 5% Done
18 May 2020 15:56:57,173 INFO : Inserting TMSL3_CL03
18 May 2020 15:56:57,196 INFO : 6% Done
18 May 2020 15:56:59,130 INFO : Inserting AD029_CL04
18 May 2020 15:56:59,164 INFO : 7% Done
18 May 2020 15:57:00,523 INFO : Inserting CDC2_CL04
18 May 2020 15:57:00,557 INFO : 8% Done
18 May 2020 15:57:01,713 INFO : Inserting ATAD2_CL05
18 May 2020 15:57:01,739 INFO : 9% Done
18 May 2020 15:57:03,234 INFO : Inserting BAT2D1_CL05
18 May 2020 15:57:03,255 INFO : 10% Done
18 May 2020 15:57:04,307 INFO : Inserting AGS1_CL06
18 May 2020 15:57:05,671 INFO : Inserting A2D_CL07
18 May 2020 15:57:05,685 INFO : 11% Done
18 May 2020 15:57:06,184 INFO : Inserting ZNF672_CL07
18 May 2020 15:57:07,386 INFO : Inserting ABI1_CL08
18 May 2020 15:57:07,416 INFO : 13% Done
18 May 2020 15:57:08,887 INFO : Inserting FOSL2_CL08
18 May 2020 15:57:09,746 INFO : 14% Done
18 May 2020 15:57:10,606 INFO : Inserting C17orf85_CL09
18 May 2020 15:57:11,783 INFO : Inserting EPLIN_CL09
18 May 2020 15:57:11,831 INFO : 15% Done
18 May 2020 15:57:12,882 INFO : Inserting BAF155_CL10
18 May 2020 15:57:12,920 INFO : 16% Done
18 May 2020 15:57:14,204 INFO : Inserting FUBP2_CL10
18 May 2020 15:57:14,283 INFO : 17% Done
18 May 2020 15:57:15,146 INFO : Inserting MAP3K2_CL11
18 May 2020 15:57:15,165 INFO : 18% Done
18 May 2020 15:57:16,646 INFO : Inserting FAS_CL12
18 May 2020 15:57:17,942 INFO : 19% Done
18 May 2020 15:57:18,928 INFO : Inserting ARM2_CL13
18 May 2020 15:57:18,943 INFO : 20% Done
18 May 2020 15:57:20,103 INFO : Inserting C9orf88_CL14
18 May 2020 15:57:20,128 INFO : 21% Done
18 May 2020 15:57:21,242 INFO : Inserting ISPK1_CL14
18 May 2020 15:57:21,275 INFO : 22% Done
18 May 2020 15:57:22,545 INFO : Inserting RBM14_CL15
18 May 2020 15:57:23,817 INFO : Inserting KIAA0701_CL15
18 May 2020 15:57:23,852 INFO : 23% Done
18 May 2020 15:57:25,201 INFO : Inserting RBM17_CL16
18 May 2020 15:57:25,227 INFO : 24% Done
18 May 2020 15:57:26,378 INFO : Inserting SLC38A1_CL16
18 May 2020 15:57:26,448 INFO : 25% Done
18 May 2020 15:57:28,050 INFO : Inserting NOC2L_CL17
18 May 2020 15:57:28,124 INFO : 26% Done
18 May 2020 15:57:29,491 INFO : Inserting RPL12_CL17
18 May 2020 15:57:29,522 INFO : 27% Done
18 May 2020 15:57:31,218 INFO : Inserting DDX48_CL18
18 May 2020 15:57:31,253 INFO : 28% Done
18 May 2020 15:57:32,702 INFO : 29% Done
18 May 2020 15:57:34,284 INFO : Inserting HCA90_CL18
18 May 2020 15:57:34,314 INFO : 30% Done
18 May 2020 15:57:35,448 INFO : Inserting CAT53_CL19
18 May 2020 15:57:37,144 INFO : Inserting EPLIN_CL19
18 May 2020 15:57:37,170 INFO : 31% Done
18 May 2020 15:57:38,345 INFO : Inserting HBXAP_CL21
18 May 2020 15:57:38,409 INFO : 32% Done
18 May 2020 15:57:40,127 INFO : Inserting DCAF1_CL22
18 May 2020 15:57:40,160 INFO : 34% Done
18 May 2020 15:57:41,402 INFO : Inserting CDW2_CL22
18 May 2020 15:57:42,358 INFO : Inserting ANLN_CL23
18 May 2020 15:57:43,196 INFO : Inserting OCIA_CL23
18 May 2020 15:57:43,226 INFO : 35% Done
18 May 2020 15:57:44,653 INFO : Inserting FAM76B_CL24
18 May 2020 15:57:44,681 INFO : 37% Done
18 May 2020 15:57:46,274 INFO : Inserting HAT1_CL25
18 May 2020 15:57:46,288 INFO : 38% Done
18 May 2020 15:57:47,368 INFO : Inserting BRAF_CL26
18 May 2020 15:57:48,807 INFO : Inserting DYRK_CL27
18 May 2020 15:57:48,843 INFO : 39% Done
18 May 2020 15:57:50,197 INFO : Inserting LRWD1_CL27
18 May 2020 15:57:50,235 INFO : 40% Done
18 May 2020 15:57:51,467 INFO : Inserting ALS2_CL28
18 May 2020 15:57:52,481 INFO : Inserting BRD4_CL29
18 May 2020 15:57:52,516 INFO : 42% Done
18 May 2020 15:57:53,916 INFO : Inserting ZC3H14_CL29
18 May 2020 15:57:55,192 INFO : Inserting KIF4_CL30
18 May 2020 15:57:55,208 INFO : 43% Done
18 May 2020 15:57:56,573 INFO : Inserting MAP3K7_CL30
18 May 2020 15:57:56,629 INFO : 44% Done
18 May 2020 15:57:57,740 INFO : Inserting KIAA0722_CL31
18 May 2020 15:57:57,770 INFO : 45% Done
18 May 2020 15:57:59,034 INFO : Inserting PAK2_CL31
18 May 2020 15:58:00,275 INFO : Inserting LAP2_CL32
18 May 2020 15:58:00,291 INFO : 46% Done
18 May 2020 15:58:01,628 INFO : Inserting BAT2_CL33
18 May 2020 15:58:01,653 INFO : 47% Done
18 May 2020 15:58:03,114 INFO : Inserting My038_CL33
18 May 2020 15:58:03,137 INFO : 48% Done
18 May 2020 15:58:04,562 INFO : Inserting EMK1_CL34
18 May 2020 15:58:04,583 INFO : 49% Done
18 May 2020 15:58:05,735 INFO : Inserting WDR20_CL34
18 May 2020 15:58:05,819 INFO : 50% Done
18 May 2020 15:58:06,935 INFO : Inserting THRAP3_CL35
18 May 2020 15:58:08,058 INFO : Inserting CAIN_CL35
18 May 2020 15:58:08,096 INFO : 51% Done
18 May 2020 15:58:09,034 INFO : Inserting GPATC8_CL37
18 May 2020 15:58:09,059 INFO : 52% Done
18 May 2020 15:58:10,380 INFO : Inserting RP11-373M8.1-002_CL37
18 May 2020 15:58:10,412 INFO : 53% Done
18 May 2020 15:58:11,215 INFO : Inserting KIAA1734_CL38
18 May 2020 15:58:12,372 INFO : Inserting MAP4_CL38
18 May 2020 15:58:12,405 INFO : 54% Done
18 May 2020 15:58:13,818 INFO : Inserting KIAA0217_CL39
18 May 2020 15:58:13,881 INFO : 55% Done
18 May 2020 15:58:15,202 INFO : Inserting CTG26_CL40
18 May 2020 15:58:15,218 INFO : 56% Done
18 May 2020 15:58:16,467 INFO : Inserting KIAA1991_CL40
18 May 2020 15:58:16,496 INFO : 57% Done
18 May 2020 15:58:18,087 INFO : Inserting DBP2_CL41
18 May 2020 15:58:18,116 INFO : 58% Done
18 May 2020 15:58:19,848 INFO : Inserting SRRM2_CL41
18 May 2020 15:58:21,215 INFO : Inserting KIAA1321_CL42
18 May 2020 15:58:21,238 INFO : 59% Done
18 May 2020 15:58:22,227 INFO : Inserting MAPKAPK1A_CL43
18 May 2020 15:58:22,300 INFO : 60% Done
18 May 2020 15:58:23,751 INFO : 61% Done
18 May 2020 15:58:24,713 INFO : Inserting C22orf9_CL43
18 May 2020 15:58:24,775 INFO : 62% Done
18 May 2020 15:58:26,127 INFO : Inserting KIAA1844_CL44
18 May 2020 15:58:27,235 INFO : Inserting CCNYL1_CL45
18 May 2020 15:58:27,263 INFO : 63% Done
18 May 2020 15:58:28,636 INFO : Inserting PDK1_CL46
18 May 2020 15:58:28,687 INFO : 65% Done
18 May 2020 15:58:30,097 INFO : Inserting OK/SW-cl.2_CL46
18 May 2020 15:58:30,124 INFO : 66% Done
18 May 2020 15:58:31,214 INFO : Inserting PLEC1_CL47
18 May 2020 15:58:33,142 INFO : Inserting CASC3_CL48
18 May 2020 15:58:33,169 INFO : 67% Done
18 May 2020 15:58:34,585 INFO : Inserting BAT2D1_CL48
18 May 2020 15:58:34,619 INFO : 69% Done
18 May 2020 15:58:35,891 INFO : Inserting LAP2_CL49
18 May 2020 15:58:35,920 INFO : 70% Done
18 May 2020 15:58:37,348 INFO : Inserting TB7_CL49
18 May 2020 15:58:38,832 INFO : Inserting IQGAP3_CL50
18 May 2020 15:58:38,950 INFO : 71% Done
18 May 2020 15:58:40,220 INFO : Inserting NFATC2IP_CL50
18 May 2020 15:58:40,326 INFO : 72% Done
18 May 2020 15:58:41,700 INFO : Inserting BAF45D_CL51
18 May 2020 15:58:41,809 INFO : 73% Done
18 May 2020 15:58:42,930 INFO : Inserting PP8000_CL51
18 May 2020 15:58:43,061 INFO : 74% Done
18 May 2020 15:58:44,520 INFO : Inserting HSPC075_CL52
18 May 2020 15:58:45,925 INFO : Inserting C13orf8_CL52
18 May 2020 15:58:45,972 INFO : 76% Done
18 May 2020 15:58:47,512 INFO : Inserting JUND_CL53
18 May 2020 15:58:47,533 INFO : 77% Done
18 May 2020 15:58:48,686 INFO : Inserting CLTA_CL53
18 May 2020 15:58:48,718 INFO : 78% Done
18 May 2020 15:58:49,984 INFO : Inserting KIAA0035_CL54
18 May 2020 15:58:51,173 INFO : Inserting AP1GBP1_CL55
18 May 2020 15:58:51,189 INFO : 79% Done
18 May 2020 15:58:52,323 INFO : Inserting CIN85_CL55
18 May 2020 15:58:52,350 INFO : 80% Done
18 May 2020 15:58:53,625 INFO : Done parsing Skyline document.
18 May 2020 15:58:53,664 INFO : No group comparisons found.
18 May 2020 15:58:53,664 INFO : Calculating calibration curves
18 May 2020 15:58:54,152 INFO : 81% Done
18 May 2020 15:58:55,073 INFO : 82% Done
18 May 2020 15:58:55,826 INFO : 83% Done
18 May 2020 15:58:56,689 INFO : 84% Done
18 May 2020 15:58:57,589 INFO : 85% Done
18 May 2020 15:58:58,540 INFO : 86% Done
18 May 2020 15:58:59,223 INFO : 87% Done
18 May 2020 15:59:00,033 INFO : 88% Done
18 May 2020 15:59:00,836 INFO : 89% Done
18 May 2020 15:59:01,556 INFO : 90% Done
18 May 2020 15:59:02,304 INFO : 91% Done
18 May 2020 15:59:03,209 INFO : 92% Done
18 May 2020 15:59:04,356 INFO : 93% Done
18 May 2020 15:59:05,175 INFO : 94% Done
18 May 2020 15:59:06,014 INFO : 95% Done
18 May 2020 15:59:06,758 INFO : 96% Done
18 May 2020 15:59:07,436 INFO : 97% Done
18 May 2020 15:59:08,216 INFO : 98% Done
18 May 2020 15:59:08,535 INFO : Done calculating calibration curves.
18 May 2020 15:59:08,537 INFO : Creating and populating temp tables for Proportion values
18 May 2020 15:59:09,152 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
18 May 2020 15:59:11,331 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
18 May 2020 15:59:11,940 INFO : Cleaning up temp tables
18 May 2020 15:59:15,062 INFO : Copied LINCS_P100_DIA_Plate29_annotated_minimized.skyd to cloud storage.
18 May 2020 15:59:15,234 INFO : Copied P100_DIA_CE30_PurePeptides.blib to cloud storage.
18 May 2020 15:59:15,734 INFO : Completed import of Skyline document from LINCS_P100_DIA_Plate29_annotated_minimized_2020-05-18_18-50-11.sky.zip
18 May 2020 15:59:15,742 INFO : 100% Done
18 May 2020 15:59:16,295 INFO : LINCS: Queued job Id 87437 for submitting POST request to PSP.
18 May 2020 15:59:16,536 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'