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Re-running LINCS pipeline on PSP for: LINCS_P100_DIA_Plate29_annotated_minimized_2020-05-14_17-12-06

P100

Job Status

Created: 2020-05-15 09:24:13
Modified: 2020-06-01 16:07:27
Email: vsharma@uw.edu
Status: ERROR
Info:
Description: Re-running LINCS pipeline on PSP for: LINCS_P100_DIA_Plate29_annotated_minimized_2020-05-14_17-12-06
File Path: /data/labkey/files/LINCS/P100/@files/LincsPSP_rerun_LINCS_P100_DIA_Plate29_annotated_minimized_2020-05-14_17-12-06_2020-05-15_09-24-12.log
Files: LincsPSP_rerun_LINCS_P100_DIA_Plate29_annotated_minimized_2020-05-14_17-12-06_2020-05-15_09-24-12.log
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Log File


15 May 2020 09:24:13,207 INFO : Re-running LINCS pipeline on PSP for:  LINCS_P100_DIA_Plate29_annotated_minimized_2020-05-14_17-12-06
15 May 2020 09:24:13,207 INFO : =======================================
15 May 2020 09:44:45,622 INFO : Starting to run task 'org.labkey.lincs.psp.LincsPspTask' at location 'webserver-high-priority'
15 May 2020 09:44:45,622 INFO : Running LINCS PSP pipeline for LINCS_P100_DIA_Plate29_annotated_minimized_2020-05-14_17-12-06
15 May 2020 09:44:45,632 INFO : Resubmitting job for runId: 87161, name: LINCS_P100_DIA_Plate29_annotated_minimized_2020-05-14_17-12-06
15 May 2020 09:44:45,632 INFO : Old job details: 
15 May 2020 09:44:45,632 INFO : Id: 306
15 May 2020 09:44:45,632 INFO : Pipeline job Id: 86996
15 May 2020 09:44:45,633 INFO : Run Id: 87161
15 May 2020 09:44:45,633 INFO : PSP Job Id: 5ebdb67c974c88001895b235
15 May 2020 09:44:45,633 INFO : PSP Job name: LINCS_P100_DIA_Plate29_annotated_minimized_2020-05-14_17-12-06
15 May 2020 09:44:45,633 INFO : PSP Job status: Waiting_To_Download
15 May 2020 09:44:45,634 INFO : JSON: {"level 4":{"panorama":{"method":"PUT","url":"https://panoramaweb.org/_webdav/LINCS/P100/%40files/GCT/LINCS_P100_DIA_Plate29_annotated_minimized_2020-05-14_17-12-06_LVL4.gct"}},"assay":"P100","created":"2020-05-14T21:22:04.365Z","name":"LINCS_P100_DIA_Plate29_annotated_minimized_2020-05-14_17-12-06","id":"5ebdb67c974c88001895b235","last_modified":"2020-05-14T21:22:04.365Z","config":{"panorama":{"method":"PUT","url":"https://panoramaweb.org/_webdav/LINCS/P100/%40files/GCT/LINCS_P100_DIA_Plate29_annotated_minimized_2020-05-14_17-12-06.cfg"}},"level 2":{"panorama":{"method":"GET","url":"https://panoramaweb.org/LINCS/P100/lincs-runGCTReportApi.view?runId=87161&remote=true&reportName=GCT%20File%20P100"}},"status":"Waiting_To_Download","level 3":{"panorama":{"method":"PUT","url":"https://panoramaweb.org/_webdav/LINCS/P100/%40files/GCT/LINCS_P100_DIA_Plate29_annotated_minimized_2020-05-14_17-12-06_LVL3.gct"}}}
15 May 2020 09:44:45,634 INFO : Resubmitting...
15 May 2020 09:44:45,636 INFO : Looking for existing job with name LINCS_P100_DIA_Plate29_annotated_minimized_2020-05-14_17-12-06
15 May 2020 09:44:46,025 INFO : Job with name LINCS_P100_DIA_Plate29_annotated_minimized_2020-05-14_17-12-06exists.
15 May 2020 09:44:46,029 INFO : Looking for existing job with name LINCS_P100_DIA_Plate29_annotated_minimized_2020-05-14_17-12-06_2
15 May 2020 09:44:46,159 INFO : PSP job name: LINCS_P100_DIA_Plate29_annotated_minimized_2020-05-14_17-12-06_2
15 May 2020 09:44:46,159 INFO : Sending JSON:
15 May 2020 09:44:46,160 INFO : {
  "level 4": {"panorama": {
    "method": "PUT",
    "url": "https://panoramaweb.org/_webdav/LINCS/P100/%40files/GCT/LINCS_P100_DIA_Plate29_annotated_minimized_2020-05-14_17-12-06_LVL4.gct"
  }},
  "assay": "P100",
  "name": "LINCS_P100_DIA_Plate29_annotated_minimized_2020-05-14_17-12-06_2",
  "config": {"panorama": {
    "method": "PUT",
    "url": "https://panoramaweb.org/_webdav/LINCS/P100/%40files/GCT/LINCS_P100_DIA_Plate29_annotated_minimized_2020-05-14_17-12-06.cfg"
  }},
  "level 2": {"panorama": {
    "method": "GET",
    "url": "https://panoramaweb.org/LINCS/P100/lincs-runGCTReportApi.view?runId=87161&remote=true&reportName=GCT%20File%20P100"
  }},
  "level 3": {"panorama": {
    "method": "PUT",
    "url": "https://panoramaweb.org/_webdav/LINCS/P100/%40files/GCT/LINCS_P100_DIA_Plate29_annotated_minimized_2020-05-14_17-12-06_LVL3.gct"
  }}
}
15 May 2020 09:44:46,160 INFO : Sending POST request to https://api.clue.io/api/psp
15 May 2020 09:44:46,404 INFO : Response code - 200
15 May 2020 09:44:46,404 INFO : Response from server: {"name":"LINCS_P100_DIA_Plate29_annotated_minimized_2020-05-14_17-12-06_2","assay":"P100","status":"Waiting_To_Download","id":"5ebec6fe974c88001895b28c","created":"2020-05-15T16:44:46.236Z","last_modified":"2020-05-15T16:44:46.236Z","level 2":{"panorama":{"method":"GET","url":"https://panoramaweb.org/LINCS/P100/lincs-runGCTReportApi.view?runId=87161&remote=true&reportName=GCT%20File%20P100"}},"level 3":{"panorama":{"method":"PUT","url":"https://panoramaweb.org/_webdav/LINCS/P100/%40files/GCT/LINCS_P100_DIA_Plate29_annotated_minimized_2020-05-14_17-12-06_LVL3.gct"}},"level 4":{"panorama":{"method":"PUT","url":"https://panoramaweb.org/_webdav/LINCS/P100/%40files/GCT/LINCS_P100_DIA_Plate29_annotated_minimized_2020-05-14_17-12-06_LVL4.gct"}},"config":{"panorama":{"method":"PUT","url":"https://panoramaweb.org/_webdav/LINCS/P100/%40files/GCT/LINCS_P100_DIA_Plate29_annotated_minimized_2020-05-14_17-12-06.cfg"}}}
15 May 2020 09:44:46,405 INFO : Sent POST request to https://api.clue.io/api/psp
15 May 2020 09:44:46,422 INFO : Checking status of job 5ebec6fe974c88001895b28c
15 May 2020 09:44:46,554 INFO : Status: Waiting_To_Download
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15 May 2020 10:15:36,027 INFO : Finished running LINCS PSP pipeline.
15 May 2020 10:15:36,027 INFO : Successfully completed task 'org.labkey.lincs.psp.LincsPspTask'