Skyline document import - LINCS_P100_DIA_Plate29_annotated_minimized_2020-05-14_17-12-06.sky.zip

P100

Job Status

Created: 2020-05-14 14:19:25
Modified: 2020-06-01 16:07:27
Email: karen@broadinstitute.org
Status: COMPLETE
Info:
Description: Skyline document import - LINCS_P100_DIA_Plate29_annotated_minimized_2020-05-14_17-12-06.sky.zip
File Path: /data/labkey/files/LINCS/P100/@files/LINCS_P100_DIA_Plate29_annotated_minimized_2020-05-14_17-12-06.sky_2020-05-14_14-19-24.log
Files: LINCS_P100_DIA_Plate29_annotated_minimized_2020-05-14_17-12-06.sky_2020-05-14_14-19-24.log

Log File


14 May 2020 14:19:25,250 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
14 May 2020 14:19:26,750 INFO : Created temp file because input is from cloud: s3://s3.amazonaws.com/mc-panoramaweb/container628/LINCS_P100_DIA_Plate29_annotated_minimized_2020-05-14_17-12-06.sky.zip
14 May 2020 14:19:26,752 INFO : Starting to import Skyline document from LINCS_P100_DIA_Plate29_annotated_minimized_2020-05-14_17-12-06.sky.zip
14 May 2020 14:19:26,752 INFO : Expanding P100_DIA_CE30_PurePeptides.blib
14 May 2020 14:19:26,754 INFO : Expanding LINCS_P100_DIA_Plate29_annotated_minimized.skyd
14 May 2020 14:19:27,375 INFO : Expanding LINCS_P100_DIA_Plate29_annotated_minimized.sky.view
14 May 2020 14:19:27,376 INFO : Expanding LINCS_P100_DIA_Plate29_annotated_minimized.sky
14 May 2020 14:19:27,470 WARN : The version of this Skyline document is 20.11. This is newer than the highest supported version 4.1
14 May 2020 14:19:27,484 INFO : 2% Done
14 May 2020 14:19:31,954 INFO : Inserting NANS_CL01
14 May 2020 14:19:34,765 INFO : Inserting AHNAK_CL01
14 May 2020 14:19:36,263 INFO : Inserting DDX54_CL02
14 May 2020 14:19:36,302 INFO : 3% Done
14 May 2020 14:19:37,377 INFO : Inserting HSPC216_CL02
14 May 2020 14:19:37,432 INFO : 4% Done
14 May 2020 14:19:38,372 INFO : Inserting PFKF_CL03
14 May 2020 14:19:38,413 INFO : 5% Done
14 May 2020 14:19:39,565 INFO : Inserting TMSL3_CL03
14 May 2020 14:19:39,600 INFO : 6% Done
14 May 2020 14:19:41,473 INFO : Inserting AD029_CL04
14 May 2020 14:19:41,503 INFO : 7% Done
14 May 2020 14:19:42,820 INFO : Inserting CDC2_CL04
14 May 2020 14:19:42,846 INFO : 8% Done
14 May 2020 14:19:44,155 INFO : Inserting ATAD2_CL05
14 May 2020 14:19:44,205 INFO : 9% Done
14 May 2020 14:19:45,773 INFO : Inserting BAT2D1_CL05
14 May 2020 14:19:45,801 INFO : 10% Done
14 May 2020 14:19:46,708 INFO : Inserting AGS1_CL06
14 May 2020 14:19:48,000 INFO : Inserting A2D_CL07
14 May 2020 14:19:48,026 INFO : 11% Done
14 May 2020 14:19:49,711 INFO : Inserting ZNF672_CL07
14 May 2020 14:19:50,911 INFO : Inserting ABI1_CL08
14 May 2020 14:19:50,936 INFO : 13% Done
14 May 2020 14:19:52,162 INFO : Inserting FOSL2_CL08
14 May 2020 14:19:53,069 INFO : 14% Done
14 May 2020 14:19:53,813 INFO : Inserting C17orf85_CL09
14 May 2020 14:19:55,029 INFO : Inserting EPLIN_CL09
14 May 2020 14:19:55,091 INFO : 15% Done
14 May 2020 14:19:56,342 INFO : Inserting BAF155_CL10
14 May 2020 14:19:56,358 INFO : 16% Done
14 May 2020 14:19:57,619 INFO : Inserting FUBP2_CL10
14 May 2020 14:19:57,639 INFO : 17% Done
14 May 2020 14:19:58,482 INFO : Inserting MAP3K2_CL11
14 May 2020 14:19:58,500 INFO : 18% Done
14 May 2020 14:20:00,029 INFO : Inserting FAS_CL12
14 May 2020 14:20:01,345 INFO : 19% Done
14 May 2020 14:20:03,065 INFO : Inserting ARM2_CL13
14 May 2020 14:20:03,132 INFO : 20% Done
14 May 2020 14:20:04,275 INFO : Inserting C9orf88_CL14
14 May 2020 14:20:04,311 INFO : 21% Done
14 May 2020 14:20:05,483 INFO : Inserting ISPK1_CL14
14 May 2020 14:20:05,515 INFO : 22% Done
14 May 2020 14:20:06,771 INFO : Inserting RBM14_CL15
14 May 2020 14:20:07,903 INFO : Inserting KIAA0701_CL15
14 May 2020 14:20:07,920 INFO : 23% Done
14 May 2020 14:20:09,249 INFO : Inserting RBM17_CL16
14 May 2020 14:20:09,308 INFO : 24% Done
14 May 2020 14:20:10,749 INFO : Inserting SLC38A1_CL16
14 May 2020 14:20:10,771 INFO : 25% Done
14 May 2020 14:20:12,624 INFO : Inserting NOC2L_CL17
14 May 2020 14:20:12,696 INFO : 26% Done
14 May 2020 14:20:14,243 INFO : Inserting RPL12_CL17
14 May 2020 14:20:14,277 INFO : 27% Done
14 May 2020 14:20:15,917 INFO : Inserting DDX48_CL18
14 May 2020 14:20:15,935 INFO : 28% Done
14 May 2020 14:20:17,382 INFO : 29% Done
14 May 2020 14:20:18,830 INFO : Inserting HCA90_CL18
14 May 2020 14:20:18,856 INFO : 30% Done
14 May 2020 14:20:19,857 INFO : Inserting CAT53_CL19
14 May 2020 14:20:21,608 INFO : Inserting EPLIN_CL19
14 May 2020 14:20:21,623 INFO : 31% Done
14 May 2020 14:20:22,838 INFO : Inserting HBXAP_CL21
14 May 2020 14:20:22,898 INFO : 32% Done
14 May 2020 14:20:24,623 INFO : Inserting DCAF1_CL22
14 May 2020 14:20:24,654 INFO : 34% Done
14 May 2020 14:20:26,099 INFO : Inserting CDW2_CL22
14 May 2020 14:20:27,097 INFO : Inserting ANLN_CL23
14 May 2020 14:20:27,919 INFO : Inserting OCIA_CL23
14 May 2020 14:20:27,973 INFO : 35% Done
14 May 2020 14:20:30,067 INFO : Inserting FAM76B_CL24
14 May 2020 14:20:30,129 INFO : 37% Done
14 May 2020 14:20:31,770 INFO : Inserting HAT1_CL25
14 May 2020 14:20:31,785 INFO : 38% Done
14 May 2020 14:20:32,837 INFO : Inserting BRAF_CL26
14 May 2020 14:20:35,017 INFO : Inserting DYRK_CL27
14 May 2020 14:20:35,058 INFO : 39% Done
14 May 2020 14:20:36,292 INFO : Inserting LRWD1_CL27
14 May 2020 14:20:36,381 INFO : 40% Done
14 May 2020 14:20:37,518 INFO : Inserting ALS2_CL28
14 May 2020 14:20:38,529 INFO : Inserting BRD4_CL29
14 May 2020 14:20:38,585 INFO : 42% Done
14 May 2020 14:20:39,966 INFO : Inserting ZC3H14_CL29
14 May 2020 14:20:41,157 INFO : Inserting KIF4_CL30
14 May 2020 14:20:41,174 INFO : 43% Done
14 May 2020 14:20:42,537 INFO : Inserting MAP3K7_CL30
14 May 2020 14:20:42,551 INFO : 44% Done
14 May 2020 14:20:43,571 INFO : Inserting KIAA0722_CL31
14 May 2020 14:20:43,586 INFO : 45% Done
14 May 2020 14:20:44,884 INFO : Inserting PAK2_CL31
14 May 2020 14:20:46,048 INFO : Inserting LAP2_CL32
14 May 2020 14:20:46,063 INFO : 46% Done
14 May 2020 14:20:47,406 INFO : Inserting BAT2_CL33
14 May 2020 14:20:47,450 INFO : 47% Done
14 May 2020 14:20:48,994 INFO : Inserting My038_CL33
14 May 2020 14:20:49,021 INFO : 48% Done
14 May 2020 14:20:50,632 INFO : Inserting EMK1_CL34
14 May 2020 14:20:50,663 INFO : 49% Done
14 May 2020 14:20:51,797 INFO : Inserting WDR20_CL34
14 May 2020 14:20:51,867 INFO : 50% Done
14 May 2020 14:20:52,997 INFO : Inserting THRAP3_CL35
14 May 2020 14:20:54,218 INFO : Inserting CAIN_CL35
14 May 2020 14:20:54,277 INFO : 51% Done
14 May 2020 14:20:55,300 INFO : Inserting GPATC8_CL37
14 May 2020 14:20:55,343 INFO : 52% Done
14 May 2020 14:20:56,726 INFO : Inserting RP11-373M8.1-002_CL37
14 May 2020 14:20:56,749 INFO : 53% Done
14 May 2020 14:20:57,620 INFO : Inserting KIAA1734_CL38
14 May 2020 14:20:58,631 INFO : Inserting MAP4_CL38
14 May 2020 14:20:58,698 INFO : 54% Done
14 May 2020 14:21:00,156 INFO : Inserting KIAA0217_CL39
14 May 2020 14:21:00,181 INFO : 55% Done
14 May 2020 14:21:01,329 INFO : Inserting CTG26_CL40
14 May 2020 14:21:01,393 INFO : 56% Done
14 May 2020 14:21:02,208 INFO : Inserting KIAA1991_CL40
14 May 2020 14:21:02,236 INFO : 57% Done
14 May 2020 14:21:03,918 INFO : Inserting DBP2_CL41
14 May 2020 14:21:03,947 INFO : 58% Done
14 May 2020 14:21:05,832 INFO : Inserting SRRM2_CL41
14 May 2020 14:21:07,284 INFO : Inserting KIAA1321_CL42
14 May 2020 14:21:07,313 INFO : 59% Done
14 May 2020 14:21:08,300 INFO : Inserting MAPKAPK1A_CL43
14 May 2020 14:21:08,328 INFO : 60% Done
14 May 2020 14:21:09,920 INFO : 61% Done
14 May 2020 14:21:11,124 INFO : Inserting C22orf9_CL43
14 May 2020 14:21:11,153 INFO : 62% Done
14 May 2020 14:21:12,409 INFO : Inserting KIAA1844_CL44
14 May 2020 14:21:13,685 INFO : Inserting CCNYL1_CL45
14 May 2020 14:21:13,713 INFO : 63% Done
14 May 2020 14:21:15,042 INFO : Inserting PDK1_CL46
14 May 2020 14:21:15,103 INFO : 65% Done
14 May 2020 14:21:16,570 INFO : Inserting OK/SW-cl.2_CL46
14 May 2020 14:21:16,584 INFO : 66% Done
14 May 2020 14:21:17,667 INFO : Inserting PLEC1_CL47
14 May 2020 14:21:19,877 INFO : Inserting CASC3_CL48
14 May 2020 14:21:19,902 INFO : 67% Done
14 May 2020 14:21:21,408 INFO : Inserting BAT2D1_CL48
14 May 2020 14:21:21,432 INFO : 69% Done
14 May 2020 14:21:22,729 INFO : Inserting LAP2_CL49
14 May 2020 14:21:22,794 INFO : 70% Done
14 May 2020 14:21:24,265 INFO : Inserting TB7_CL49
14 May 2020 14:21:25,827 INFO : Inserting IQGAP3_CL50
14 May 2020 14:21:25,854 INFO : 71% Done
14 May 2020 14:21:26,967 INFO : Inserting NFATC2IP_CL50
14 May 2020 14:21:26,999 INFO : 72% Done
14 May 2020 14:21:28,381 INFO : Inserting BAF45D_CL51
14 May 2020 14:21:28,408 INFO : 73% Done
14 May 2020 14:21:29,557 INFO : Inserting PP8000_CL51
14 May 2020 14:21:29,575 INFO : 74% Done
14 May 2020 14:21:31,291 INFO : Inserting HSPC075_CL52
14 May 2020 14:21:32,730 INFO : Inserting C13orf8_CL52
14 May 2020 14:21:32,758 INFO : 76% Done
14 May 2020 14:21:34,400 INFO : Inserting JUND_CL53
14 May 2020 14:21:34,472 INFO : 77% Done
14 May 2020 14:21:35,672 INFO : Inserting CLTA_CL53
14 May 2020 14:21:35,687 INFO : 78% Done
14 May 2020 14:21:36,978 INFO : Inserting KIAA0035_CL54
14 May 2020 14:21:38,170 INFO : Inserting AP1GBP1_CL55
14 May 2020 14:21:38,201 INFO : 79% Done
14 May 2020 14:21:39,487 INFO : Inserting CIN85_CL55
14 May 2020 14:21:39,555 INFO : 80% Done
14 May 2020 14:21:40,916 INFO : Done parsing Skyline document.
14 May 2020 14:21:40,953 INFO : No group comparisons found.
14 May 2020 14:21:40,953 INFO : Calculating calibration curves
14 May 2020 14:21:41,415 INFO : 81% Done
14 May 2020 14:21:42,272 INFO : 82% Done
14 May 2020 14:21:43,114 INFO : 83% Done
14 May 2020 14:21:43,964 INFO : 84% Done
14 May 2020 14:21:44,836 INFO : 85% Done
14 May 2020 14:21:45,693 INFO : 86% Done
14 May 2020 14:21:46,336 INFO : 87% Done
14 May 2020 14:21:47,226 INFO : 88% Done
14 May 2020 14:21:47,900 INFO : 89% Done
14 May 2020 14:21:48,622 INFO : 90% Done
14 May 2020 14:21:49,379 INFO : 91% Done
14 May 2020 14:21:50,254 INFO : 92% Done
14 May 2020 14:21:51,355 INFO : 93% Done
14 May 2020 14:21:52,089 INFO : 94% Done
14 May 2020 14:21:52,903 INFO : 95% Done
14 May 2020 14:21:53,611 INFO : 96% Done
14 May 2020 14:21:54,253 INFO : 97% Done
14 May 2020 14:21:55,047 INFO : 98% Done
14 May 2020 14:21:55,622 INFO : Done calculating calibration curves.
14 May 2020 14:21:55,625 INFO : Creating and populating temp tables for Proportion values
14 May 2020 14:21:56,198 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
14 May 2020 14:21:58,083 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
14 May 2020 14:21:58,728 INFO : Cleaning up temp tables
14 May 2020 14:22:01,673 INFO : Copied LINCS_P100_DIA_Plate29_annotated_minimized.skyd to cloud storage.
14 May 2020 14:22:01,825 INFO : Copied P100_DIA_CE30_PurePeptides.blib to cloud storage.
14 May 2020 14:22:02,316 INFO : Completed import of Skyline document from LINCS_P100_DIA_Plate29_annotated_minimized_2020-05-14_17-12-06.sky.zip
14 May 2020 14:22:02,324 INFO : 100% Done
14 May 2020 14:22:03,195 INFO : LINCS: Queued job Id 86996 for submitting POST request to PSP.
14 May 2020 14:22:03,359 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'