07 Jan 2020 14:59:30,790 INFO : Re-running LINCS pipeline on PSP for:  LINCS_P100_DIA_Plate91_annotated_minimized_2020-01-02_12-26-50

07 Jan 2020 14:59:30,790 INFO : =======================================

07 Jan 2020 14:59:31,162 INFO : Starting to run task 'org.labkey.lincs.psp.LincsPspTask' at location 'webserver-high-priority'

07 Jan 2020 14:59:31,162 INFO : Running LINCS PSP pipeline for LINCS_P100_DIA_Plate91_annotated_minimized_2020-01-02_12-26-50

07 Jan 2020 14:59:31,162 INFO : Resubmitting job for runId: 80522, name: LINCS_P100_DIA_Plate91_annotated_minimized_2020-01-02_12-26-50

07 Jan 2020 14:59:31,162 INFO : Old job details: 

07 Jan 2020 14:59:31,162 INFO : Id: 289

07 Jan 2020 14:59:31,162 INFO : Pipeline job Id: 81221

07 Jan 2020 14:59:31,162 INFO : Run Id: 80522

07 Jan 2020 14:59:31,163 INFO : PSP Job Id: 5e150ced5beec6001388e3e4

07 Jan 2020 14:59:31,163 INFO : PSP Job name: LINCS_P100_DIA_Plate91_annotated_minimized_2020-01-02_12-26-50_3

07 Jan 2020 14:59:31,163 INFO : PSP Job status: created LVL2 GCT

07 Jan 2020 14:59:31,163 INFO : JSON: {"level 4":{"panorama":{"method":"PUT","url":"https://panoramaweb.org/_webdav/LINCS/P100/%40files/GCT/LINCS_P100_DIA_Plate91_annotated_minimized_2020-01-02_12-26-50_LVL4.gct"}},"assay":"P100","created":"2020-01-07T22:57:49.869Z","name":"LINCS_P100_DIA_Plate91_annotated_minimized_2020-01-02_12-26-50_3","id":"5e150ced5beec6001388e3e4","last_modified":"2020-01-07T22:58:11.783Z","config":{"panorama":{"method":"PUT","url":"https://panoramaweb.org/_webdav/LINCS/P100/%40files/GCT/LINCS_P100_DIA_Plate91_annotated_minimized_2020-01-02_12-26-50.cfg"}},"level 2":{"s3":{"url":"s3://proteomics.clue.io/psp/level2/LINCS_P100_DIA_Plate91_annotated_minimized_2020-01-02_12-26-50_3_LVL2.gct"},"panorama":{"method":"GET","url":"https://panoramaweb.org/lincs/LINCS/P100/runGCTReportApi.view?runId=80522&remote=true&reportName=GCT%20File%20P100"}},"status":"created LVL2 GCT","level 3":{"s3":{"message":"dry error: need more than 1 value to unpack"},"panorama":{"method":"PUT","url":"https://panoramaweb.org/_webdav/LINCS/P100/%40files/GCT/LINCS_P100_DIA_Plate91_annotated_minimized_2020-01-02_12-26-50_LVL3.gct"}}}

07 Jan 2020 14:59:31,163 INFO : Resubmitting...

07 Jan 2020 14:59:31,165 INFO : Looking for existing job with name LINCS_P100_DIA_Plate91_annotated_minimized_2020-01-02_12-26-50

07 Jan 2020 14:59:31,517 INFO : Job with name LINCS_P100_DIA_Plate91_annotated_minimized_2020-01-02_12-26-50exists.

07 Jan 2020 14:59:31,518 INFO : Looking for existing job with name LINCS_P100_DIA_Plate91_annotated_minimized_2020-01-02_12-26-50_2

07 Jan 2020 14:59:31,638 INFO : Job with name LINCS_P100_DIA_Plate91_annotated_minimized_2020-01-02_12-26-50_2exists.

07 Jan 2020 14:59:31,638 INFO : Looking for existing job with name LINCS_P100_DIA_Plate91_annotated_minimized_2020-01-02_12-26-50_3

07 Jan 2020 14:59:31,756 INFO : Job with name LINCS_P100_DIA_Plate91_annotated_minimized_2020-01-02_12-26-50_3exists.

07 Jan 2020 14:59:31,757 INFO : Looking for existing job with name LINCS_P100_DIA_Plate91_annotated_minimized_2020-01-02_12-26-50_4

07 Jan 2020 14:59:31,875 INFO : PSP job name: LINCS_P100_DIA_Plate91_annotated_minimized_2020-01-02_12-26-50_4

07 Jan 2020 14:59:31,875 INFO : Sending JSON:

07 Jan 2020 14:59:31,875 INFO : {
  "level 4": {"panorama": {
    "method": "PUT",
    "url": "https://panoramaweb.org/_webdav/LINCS/P100/%40files/GCT/LINCS_P100_DIA_Plate91_annotated_minimized_2020-01-02_12-26-50_LVL4.gct"
  }},
  "assay": "P100",
  "name": "LINCS_P100_DIA_Plate91_annotated_minimized_2020-01-02_12-26-50_4",
  "config": {"panorama": {
    "method": "PUT",
    "url": "https://panoramaweb.org/_webdav/LINCS/P100/%40files/GCT/LINCS_P100_DIA_Plate91_annotated_minimized_2020-01-02_12-26-50.cfg"
  }},
  "level 2": {"panorama": {
    "method": "GET",
    "url": "https://panoramaweb.org/lincs/LINCS/P100/runGCTReportApi.view?runId=80522&remote=true&reportName=GCT%20File%20P100"
  }},
  "level 3": {"panorama": {
    "method": "PUT",
    "url": "https://panoramaweb.org/_webdav/LINCS/P100/%40files/GCT/LINCS_P100_DIA_Plate91_annotated_minimized_2020-01-02_12-26-50_LVL3.gct"
  }}
}

07 Jan 2020 14:59:31,876 INFO : Sending POST request to https://api.clue.io/api/psp

07 Jan 2020 14:59:32,053 INFO : Response code - 200

07 Jan 2020 14:59:32,053 INFO : Response from server: {"name":"LINCS_P100_DIA_Plate91_annotated_minimized_2020-01-02_12-26-50_4","assay":"P100","status":"Waiting_To_Download","id":"5e150d539351020013cb887c","created":"2020-01-07T22:59:31.943Z","last_modified":"2020-01-07T22:59:31.943Z","level 2":{"panorama":{"method":"GET","url":"https://panoramaweb.org/lincs/LINCS/P100/runGCTReportApi.view?runId=80522&remote=true&reportName=GCT%20File%20P100"}},"level 3":{"panorama":{"method":"PUT","url":"https://panoramaweb.org/_webdav/LINCS/P100/%40files/GCT/LINCS_P100_DIA_Plate91_annotated_minimized_2020-01-02_12-26-50_LVL3.gct"}},"level 4":{"panorama":{"method":"PUT","url":"https://panoramaweb.org/_webdav/LINCS/P100/%40files/GCT/LINCS_P100_DIA_Plate91_annotated_minimized_2020-01-02_12-26-50_LVL4.gct"}},"config":{"panorama":{"method":"PUT","url":"https://panoramaweb.org/_webdav/LINCS/P100/%40files/GCT/LINCS_P100_DIA_Plate91_annotated_minimized_2020-01-02_12-26-50.cfg"}}}

07 Jan 2020 14:59:32,054 INFO : Sent POST request to https://api.clue.io/api/psp

07 Jan 2020 14:59:32,056 INFO : Checking status of job 5e150d539351020013cb887c

07 Jan 2020 14:59:32,176 INFO : Status: Waiting_To_Download

07 Jan 2020 14:59:52,176 INFO : Checking status of job 5e150d539351020013cb887c

07 Jan 2020 14:59:52,453 INFO : Status: created LVL2 GCT

07 Jan 2020 14:59:52,453 ERROR: Error in PSP job. Error: level 3: dry error: need more than 1 value to unpack

07 Jan 2020 14:59:52,486 INFO : Finished running LINCS PSP pipeline.

07 Jan 2020 14:59:52,486 INFO : Successfully completed task 'org.labkey.lincs.psp.LincsPspTask'