28 Aug 2019 14:27:52,465 INFO : Running LINCS pipeline on PSP for: LINCS_P100_DIA_Plate87_annotated_minimized_2019-08-28_17-17-02
28 Aug 2019 14:27:52,466 INFO : =======================================
28 Aug 2019 14:27:53,476 INFO : Starting to run task 'org.labkey.lincs.psp.LincsPspTask' at location 'webserver-high-priority'
28 Aug 2019 14:27:53,477 INFO : Running LINCS PSP pipeline for LINCS_P100_DIA_Plate87_annotated_minimized_2019-08-28_17-17-02
28 Aug 2019 14:27:53,480 INFO : Submitting job for runId: 73535, name: LINCS_P100_DIA_Plate87_annotated_minimized_2019-08-28_17-17-02
28 Aug 2019 14:27:53,485 INFO : Looking for existing job with name LINCS_P100_DIA_Plate87_annotated_minimized_2019-08-28_17-17-02
28 Aug 2019 14:27:54,359 INFO : PSP job name: LINCS_P100_DIA_Plate87_annotated_minimized_2019-08-28_17-17-02
28 Aug 2019 14:27:54,360 INFO : Sending JSON:
28 Aug 2019 14:27:54,361 INFO : {
"level 4": {"panorama": {
"method": "PUT",
"url": "https://panoramaweb.org/_webdav/LINCS/P100/%40files/GCT/LINCS_P100_DIA_Plate87_annotated_minimized_2019-08-28_17-17-02_LVL4.gct"
}},
"assay": "P100",
"name": "LINCS_P100_DIA_Plate87_annotated_minimized_2019-08-28_17-17-02",
"config": {"panorama": {
"method": "PUT",
"url": "https://panoramaweb.org/_webdav/LINCS/P100/%40files/GCT/LINCS_P100_DIA_Plate87_annotated_minimized_2019-08-28_17-17-02.cfg"
}},
"level 2": {"panorama": {
"method": "GET",
"url": "https://panoramaweb.org/lincs/LINCS/P100/runGCTReportApi.view?runId=73535&remote=true&reportName=GCT%20File%20P100"
}},
"level 3": {"panorama": {
"method": "PUT",
"url": "https://panoramaweb.org/_webdav/LINCS/P100/%40files/GCT/LINCS_P100_DIA_Plate87_annotated_minimized_2019-08-28_17-17-02_LVL3.gct"
}}
}
28 Aug 2019 14:27:54,363 INFO : Sending POST request to https://api.clue.io/api/psp
28 Aug 2019 14:27:54,652 INFO : Response code - 200
28 Aug 2019 14:27:54,653 INFO : Response from server: {"name":"LINCS_P100_DIA_Plate87_annotated_minimized_2019-08-28_17-17-02","assay":"P100","status":"Waiting_To_Download","id":"5d66f1da92c18f7b0149fc1a","created":"2019-08-28T21:27:54.432Z","last_modified":"2019-08-28T21:27:54.433Z","level 2":{"panorama":{"method":"GET","url":"https://panoramaweb.org/lincs/LINCS/P100/runGCTReportApi.view?runId=73535&remote=true&reportName=GCT%20File%20P100"}},"level 3":{"panorama":{"method":"PUT","url":"https://panoramaweb.org/_webdav/LINCS/P100/%40files/GCT/LINCS_P100_DIA_Plate87_annotated_minimized_2019-08-28_17-17-02_LVL3.gct"}},"level 4":{"panorama":{"method":"PUT","url":"https://panoramaweb.org/_webdav/LINCS/P100/%40files/GCT/LINCS_P100_DIA_Plate87_annotated_minimized_2019-08-28_17-17-02_LVL4.gct"}},"config":{"panorama":{"method":"PUT","url":"https://panoramaweb.org/_webdav/LINCS/P100/%40files/GCT/LINCS_P100_DIA_Plate87_annotated_minimized_2019-08-28_17-17-02.cfg"}}}
28 Aug 2019 14:27:54,657 INFO : Sent POST request to https://api.clue.io/api/psp
28 Aug 2019 14:27:54,660 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:27:54,777 INFO : Status: Waiting_To_Download
28 Aug 2019 14:28:14,778 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:28:15,037 INFO : Status: Waiting_To_Download
28 Aug 2019 14:28:35,038 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:28:35,298 INFO : Status: Waiting_To_Download
28 Aug 2019 14:28:55,299 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:28:55,554 INFO : Status: Waiting_To_Download
28 Aug 2019 14:29:15,554 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:29:15,811 INFO : Status: Waiting_To_Download
28 Aug 2019 14:29:35,812 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:29:36,068 INFO : Status: Waiting_To_Download
28 Aug 2019 14:29:56,069 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:29:56,328 INFO : Status: Waiting_To_Download
28 Aug 2019 14:30:16,328 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:30:16,583 INFO : Status: Waiting_To_Download
28 Aug 2019 14:30:36,584 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:30:36,835 INFO : Status: Waiting_To_Download
28 Aug 2019 14:30:56,836 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:30:57,096 INFO : Status: Waiting_To_Download
28 Aug 2019 14:31:17,096 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:31:17,351 INFO : Status: Waiting_To_Download
28 Aug 2019 14:31:37,352 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:31:37,779 INFO : Status: Waiting_To_Download
28 Aug 2019 14:31:57,779 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:31:58,251 INFO : Status: Waiting_To_Download
28 Aug 2019 14:32:18,252 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:32:18,590 INFO : Status: Waiting_To_Download
28 Aug 2019 14:32:38,591 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:32:38,895 INFO : Status: Waiting_To_Download
28 Aug 2019 14:32:58,896 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:32:59,147 INFO : Status: Waiting_To_Download
28 Aug 2019 14:33:19,148 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:33:19,401 INFO : Status: Waiting_To_Download
28 Aug 2019 14:33:39,402 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:33:39,715 INFO : Status: Waiting_To_Download
28 Aug 2019 14:33:59,716 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:33:59,975 INFO : Status: Waiting_To_Download
28 Aug 2019 14:34:19,975 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:34:20,226 INFO : Status: Waiting_To_Download
28 Aug 2019 14:34:40,227 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:34:40,483 INFO : Status: Waiting_To_Download
28 Aug 2019 14:35:00,484 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:35:00,748 INFO : Status: Waiting_To_Download
28 Aug 2019 14:35:20,749 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:35:21,069 INFO : Status: Waiting_To_Download
28 Aug 2019 14:35:41,070 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:35:41,349 INFO : Status: Waiting_To_Download
28 Aug 2019 14:36:01,349 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:36:01,609 INFO : Status: Waiting_To_Download
28 Aug 2019 14:36:21,609 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:36:21,866 INFO : Status: Waiting_To_Download
28 Aug 2019 14:36:41,867 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:36:42,138 INFO : Status: Waiting_To_Download
28 Aug 2019 14:37:02,138 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:37:02,398 INFO : Status: Waiting_To_Download
28 Aug 2019 14:37:22,399 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:37:22,659 INFO : Status: Waiting_To_Download
28 Aug 2019 14:37:42,660 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:37:42,919 INFO : Status: Waiting_To_Download
28 Aug 2019 14:38:02,920 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:38:03,257 INFO : Status: Waiting_To_Download
28 Aug 2019 14:38:23,258 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:38:23,521 INFO : Status: Waiting_To_Download
28 Aug 2019 14:38:43,522 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:38:43,789 INFO : Status: Waiting_To_Download
28 Aug 2019 14:39:03,790 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:39:04,056 INFO : Status: Waiting_To_Download
28 Aug 2019 14:39:24,057 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:39:24,337 INFO : Status: Waiting_To_Download
28 Aug 2019 14:39:44,338 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:39:44,598 INFO : Status: Waiting_To_Download
28 Aug 2019 14:40:04,599 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:40:04,847 INFO : Status: Waiting_To_Download
28 Aug 2019 14:40:24,848 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:40:25,157 INFO : Status: Waiting_To_Download
28 Aug 2019 14:40:45,158 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:40:45,411 INFO : Status: Waiting_To_Download
28 Aug 2019 14:41:05,412 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:41:05,671 INFO : Status: Waiting_To_Download
28 Aug 2019 14:41:25,672 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:41:25,984 INFO : Status: Waiting_To_Download
28 Aug 2019 14:41:45,984 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:41:46,249 INFO : Status: Waiting_To_Download
28 Aug 2019 14:42:06,249 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:42:06,503 INFO : Status: Waiting_To_Download
28 Aug 2019 14:42:26,504 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:42:26,759 INFO : Status: Waiting_To_Download
28 Aug 2019 14:42:46,759 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:42:47,024 INFO : Status: Waiting_To_Download
28 Aug 2019 14:43:07,025 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:43:07,338 INFO : Status: Waiting_To_Download
28 Aug 2019 14:43:27,338 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:43:27,590 INFO : Status: Waiting_To_Download
28 Aug 2019 14:43:47,591 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:43:47,898 INFO : Status: Waiting_To_Download
28 Aug 2019 14:44:07,898 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:44:08,197 INFO : Status: Waiting_To_Download
28 Aug 2019 14:44:28,198 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:44:28,522 INFO : Status: Waiting_To_Download
28 Aug 2019 14:44:48,522 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:44:48,782 INFO : Status: Waiting_To_Download
28 Aug 2019 14:45:08,783 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:45:09,041 INFO : Status: Waiting_To_Download
28 Aug 2019 14:45:29,042 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:45:29,296 INFO : Status: Waiting_To_Download
28 Aug 2019 14:45:49,297 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:45:49,547 INFO : Status: Waiting_To_Download
28 Aug 2019 14:46:09,547 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:46:09,798 INFO : Status: Waiting_To_Download
28 Aug 2019 14:46:29,799 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:46:30,066 INFO : Status: Waiting_To_Download
28 Aug 2019 14:46:50,067 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:46:50,323 INFO : Status: Waiting_To_Download
28 Aug 2019 14:47:10,324 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:47:10,577 INFO : Status: Waiting_To_Download
28 Aug 2019 14:47:30,578 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:47:30,844 INFO : Status: Waiting_To_Download
28 Aug 2019 14:47:50,845 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:47:51,101 INFO : Status: Waiting_To_Download
28 Aug 2019 14:48:11,101 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:48:11,429 INFO : Status: Waiting_To_Download
28 Aug 2019 14:48:31,429 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:48:31,682 INFO : Status: Waiting_To_Download
28 Aug 2019 14:48:51,682 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:48:51,939 INFO : Status: Waiting_To_Download
28 Aug 2019 14:49:11,939 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:49:12,207 INFO : Status: Waiting_To_Download
28 Aug 2019 14:49:32,207 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:49:32,463 INFO : Status: Waiting_To_Download
28 Aug 2019 14:49:52,463 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:49:52,734 INFO : Status: Waiting_To_Download
28 Aug 2019 14:50:12,735 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:50:13,002 INFO : Status: Waiting_To_Download
28 Aug 2019 14:50:33,003 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:50:33,260 INFO : Status: Waiting_To_Download
28 Aug 2019 14:50:53,261 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:50:53,523 INFO : Status: Waiting_To_Download
28 Aug 2019 14:51:13,524 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:51:13,787 INFO : Status: Waiting_To_Download
28 Aug 2019 14:51:33,787 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:51:34,037 INFO : Status: Waiting_To_Download
28 Aug 2019 14:51:54,038 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:51:54,315 INFO : Status: Waiting_To_Download
28 Aug 2019 14:52:14,315 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:52:14,574 INFO : Status: Waiting_To_Download
28 Aug 2019 14:52:34,574 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:52:34,824 INFO : Status: Waiting_To_Download
28 Aug 2019 14:52:54,825 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:52:55,098 INFO : Status: Waiting_To_Download
28 Aug 2019 14:53:15,098 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:53:15,366 INFO : Status: Waiting_To_Download
28 Aug 2019 14:53:35,366 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:53:35,617 INFO : Status: Waiting_To_Download
28 Aug 2019 14:53:55,618 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:53:55,875 INFO : Status: Waiting_To_Download
28 Aug 2019 14:54:15,876 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:54:16,132 INFO : Status: Waiting_To_Download
28 Aug 2019 14:54:36,132 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:54:36,384 INFO : Status: Waiting_To_Download
28 Aug 2019 14:54:56,385 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:54:56,643 INFO : Status: Waiting_To_Download
28 Aug 2019 14:55:16,643 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:55:16,905 INFO : Status: Waiting_To_Download
28 Aug 2019 14:55:36,906 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:55:37,156 INFO : Status: Waiting_To_Download
28 Aug 2019 14:55:57,156 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:55:57,419 INFO : Status: Waiting_To_Download
28 Aug 2019 14:56:17,420 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:56:17,677 INFO : Status: Waiting_To_Download
28 Aug 2019 14:56:37,678 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:56:37,927 INFO : Status: Waiting_To_Download
28 Aug 2019 14:56:57,928 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:56:58,188 INFO : Status: Waiting_To_Download
28 Aug 2019 14:57:18,189 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:57:18,449 INFO : Status: Waiting_To_Download
28 Aug 2019 14:57:38,449 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:57:38,729 INFO : Status: Waiting_To_Download
28 Aug 2019 14:57:58,730 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:57:58,978 INFO : Status: Waiting_To_Download
28 Aug 2019 14:58:18,979 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:58:19,357 INFO : Status: Waiting_To_Download
28 Aug 2019 14:58:39,358 INFO : Checking status of job 5d66f1da92c18f7b0149fc1a
28 Aug 2019 14:58:39,617 INFO : Status: Waiting_To_Download
28 Aug 2019 14:58:39,618 ERROR: Exceeded 30 minute wait time.
28 Aug 2019 14:58:40,146 INFO : Finished running LINCS PSP pipeline.
28 Aug 2019 14:58:40,146 INFO : Successfully completed task 'org.labkey.lincs.psp.LincsPspTask'