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Re-running LINCS pipeline on PSP for: LINCS_P100_DIA_Plate77_annotated_minimized_2019-06-10_16-17-36

P100

Job Status

Created: 2019-06-10 14:52:24
Modified: 2020-06-01 16:07:27
Email: vsharma@uw.edu
Status: COMPLETE
Info:
Description: Re-running LINCS pipeline on PSP for: LINCS_P100_DIA_Plate77_annotated_minimized_2019-06-10_16-17-36
File Path: /data/labkey/files/LINCS/P100/@files/LincsPSP_rerun_LINCS_P100_DIA_Plate77_annotated_minimized_2019-06-10_16-17-36_2019-06-10_14-52-24.log
Files: LincsPSP_rerun_LINCS_P100_DIA_Plate77_annotated_minimized_2019-06-10_16-17-36_2019-06-10_14-52-24.log
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Log File


10 Jun 2019 14:52:24,673 INFO : Re-running LINCS pipeline on PSP for:  LINCS_P100_DIA_Plate77_annotated_minimized_2019-06-10_16-17-36
10 Jun 2019 14:52:24,674 INFO : =======================================
10 Jun 2019 14:52:25,159 INFO : Starting to run task 'org.labkey.lincs.psp.LincsPspTask' at location 'webserver-high-priority'
10 Jun 2019 14:52:25,159 INFO : Running LINCS PSP pipeline for LINCS_P100_DIA_Plate77_annotated_minimized_2019-06-10_16-17-36
10 Jun 2019 14:52:25,163 INFO : Resubmitting job for runId: 67800, name: LINCS_P100_DIA_Plate77_annotated_minimized_2019-06-10_16-17-36
10 Jun 2019 14:52:25,163 INFO : Old job details: 
10 Jun 2019 14:52:25,165 INFO : Id: 115
10 Jun 2019 14:52:25,166 INFO : Pipeline job Id: 68267
10 Jun 2019 14:52:25,166 INFO : Run Id: 67800
10 Jun 2019 14:52:25,167 INFO : PSP Job Id: 5cfebc47344c151e38c98eeb
10 Jun 2019 14:52:25,167 INFO : PSP Job name: LINCS_P100_DIA_Plate77_annotated_minimized_2019-06-10_16-17-36
10 Jun 2019 14:52:25,168 INFO : PSP Job status: Waiting_To_Download
10 Jun 2019 14:52:25,168 INFO : JSON: {"level 4":{"panorama":{"method":"PUT","url":"https://panoramaweb.org/_webdav/LINCS/P100/%40files/GCT/LINCS_P100_DIA_Plate77_annotated_minimized_2019-06-10_16-17-36_LVL4.gct"}},"assay":"P100","created":"2019-06-10T20:23:35.456Z","name":"LINCS_P100_DIA_Plate77_annotated_minimized_2019-06-10_16-17-36","id":"5cfebc47344c151e38c98eeb","last_modified":"2019-06-10T20:23:35.457Z","config":{"panorama":{"method":"PUT","url":"https://panoramaweb.org/_webdav/LINCS/P100/%40files/GCT/LINCS_P100_DIA_Plate77_annotated_minimized_2019-06-10_16-17-36.cfg"}},"level 2":{"panorama":{"method":"GET","url":"https://panoramaweb.org/lincs/LINCS/P100/runGCTReportApi.view?runId=67800&remote=true&reportName=GCT%20File%20P100"}},"status":"Waiting_To_Download","level 3":{"panorama":{"method":"PUT","url":"https://panoramaweb.org/_webdav/LINCS/P100/%40files/GCT/LINCS_P100_DIA_Plate77_annotated_minimized_2019-06-10_16-17-36_LVL3.gct"}}}
10 Jun 2019 14:52:25,169 INFO : Resubmitting...
10 Jun 2019 14:52:25,171 INFO : Looking for existing job with name LINCS_P100_DIA_Plate77_annotated_minimized_2019-06-10_16-17-36
10 Jun 2019 14:52:25,318 INFO : Job with name LINCS_P100_DIA_Plate77_annotated_minimized_2019-06-10_16-17-36exists.
10 Jun 2019 14:52:25,318 INFO : Looking for existing job with name LINCS_P100_DIA_Plate77_annotated_minimized_2019-06-10_16-17-36_2
10 Jun 2019 14:52:25,479 INFO : PSP job name: LINCS_P100_DIA_Plate77_annotated_minimized_2019-06-10_16-17-36_2
10 Jun 2019 14:52:25,480 INFO : Sending JSON:
10 Jun 2019 14:52:25,480 INFO : {
  "level 4": {"panorama": {
    "method": "PUT",
    "url": "https://panoramaweb.org/_webdav/LINCS/P100/%40files/GCT/LINCS_P100_DIA_Plate77_annotated_minimized_2019-06-10_16-17-36_LVL4.gct"
  }},
  "assay": "P100",
  "name": "LINCS_P100_DIA_Plate77_annotated_minimized_2019-06-10_16-17-36_2",
  "config": {"panorama": {
    "method": "PUT",
    "url": "https://panoramaweb.org/_webdav/LINCS/P100/%40files/GCT/LINCS_P100_DIA_Plate77_annotated_minimized_2019-06-10_16-17-36.cfg"
  }},
  "level 2": {"panorama": {
    "method": "GET",
    "url": "https://panoramaweb.org/lincs/LINCS/P100/runGCTReportApi.view?runId=67800&remote=true&reportName=GCT%20File%20P100"
  }},
  "level 3": {"panorama": {
    "method": "PUT",
    "url": "https://panoramaweb.org/_webdav/LINCS/P100/%40files/GCT/LINCS_P100_DIA_Plate77_annotated_minimized_2019-06-10_16-17-36_LVL3.gct"
  }}
}
10 Jun 2019 14:52:25,481 INFO : Sending POST request to https://api.clue.io/api/psp
10 Jun 2019 14:52:25,721 INFO : Response code - 200
10 Jun 2019 14:52:25,721 INFO : Response from server: {"name":"LINCS_P100_DIA_Plate77_annotated_minimized_2019-06-10_16-17-36_2","assay":"P100","status":"Waiting_To_Download","id":"5cfed119344c151e38c98eff","created":"2019-06-10T21:52:25.544Z","last_modified":"2019-06-10T21:52:25.544Z","level 2":{"panorama":{"method":"GET","url":"https://panoramaweb.org/lincs/LINCS/P100/runGCTReportApi.view?runId=67800&remote=true&reportName=GCT%20File%20P100"}},"level 3":{"panorama":{"method":"PUT","url":"https://panoramaweb.org/_webdav/LINCS/P100/%40files/GCT/LINCS_P100_DIA_Plate77_annotated_minimized_2019-06-10_16-17-36_LVL3.gct"}},"level 4":{"panorama":{"method":"PUT","url":"https://panoramaweb.org/_webdav/LINCS/P100/%40files/GCT/LINCS_P100_DIA_Plate77_annotated_minimized_2019-06-10_16-17-36_LVL4.gct"}},"config":{"panorama":{"method":"PUT","url":"https://panoramaweb.org/_webdav/LINCS/P100/%40files/GCT/LINCS_P100_DIA_Plate77_annotated_minimized_2019-06-10_16-17-36.cfg"}}}
10 Jun 2019 14:52:25,722 INFO : Sent POST request to https://api.clue.io/api/psp
10 Jun 2019 14:52:25,725 INFO : Checking status of job 5cfed119344c151e38c98eff
10 Jun 2019 14:52:25,831 INFO : Status: Waiting_To_Download
10 Jun 2019 14:52:45,831 INFO : Checking status of job 5cfed119344c151e38c98eff
10 Jun 2019 14:52:46,081 INFO : Status: created LVL 3 GCT
10 Jun 2019 14:53:06,082 INFO : Checking status of job 5cfed119344c151e38c98eff
10 Jun 2019 14:53:06,336 INFO : Status: created LVL 3 GCT
10 Jun 2019 14:53:26,337 INFO : Checking status of job 5cfed119344c151e38c98eff
10 Jun 2019 14:53:26,584 INFO : Status: POUR : succeeded in uploading all GCTs to Panorama
10 Jun 2019 14:53:26,584 INFO : PSP job completed with status: POUR : succeeded in uploading all GCTs to Panorama
10 Jun 2019 14:53:26,584 INFO : Finished running LINCS PSP pipeline.
10 Jun 2019 14:53:26,585 INFO : Successfully completed task 'org.labkey.lincs.psp.LincsPspTask'