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Running LINCS pipeline on PSP for: LINCS_P100_DIA_Plate39_annotated_minimized_2018-05-02_20-24-43

P100

Job Status

Created: 2019-06-09 10:46:53
Modified: 2020-06-01 16:07:27
Email: vsharma@uw.edu
Status: COMPLETE
Info:
Description: Running LINCS pipeline on PSP for: LINCS_P100_DIA_Plate39_annotated_minimized_2018-05-02_20-24-43
File Path: /data/labkey/files/LINCS/P100/@files/LincsPSP_LINCS_P100_DIA_Plate39_annotated_minimized_2018-05-02_20-24-43_2019-06-09_10-46-53.log
Files: LincsPSP_LINCS_P100_DIA_Plate39_annotated_minimized_2018-05-02_20-24-43_2019-06-09_10-46-53.log
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Log File


09 Jun 2019 10:46:53,458 INFO : Running LINCS pipeline on PSP for:  LINCS_P100_DIA_Plate39_annotated_minimized_2018-05-02_20-24-43
09 Jun 2019 10:46:53,458 INFO : =======================================
09 Jun 2019 10:50:31,839 INFO : Starting to run task 'org.labkey.lincs.psp.LincsPspTask' at location 'webserver-high-priority'
09 Jun 2019 10:50:31,839 INFO : Running LINCS PSP pipeline for LINCS_P100_DIA_Plate39_annotated_minimized_2018-05-02_20-24-43
09 Jun 2019 10:50:31,839 INFO : Submitting job for runId: 31255, name: LINCS_P100_DIA_Plate39_annotated_minimized_2018-05-02_20-24-43
09 Jun 2019 10:50:31,842 INFO : Looking for existing job with name LINCS_P100_DIA_Plate39_annotated_minimized_2018-05-02_20-24-43
09 Jun 2019 10:50:31,945 INFO : PSP job name: LINCS_P100_DIA_Plate39_annotated_minimized_2018-05-02_20-24-43
09 Jun 2019 10:50:31,946 INFO : Sending JSON:
09 Jun 2019 10:50:31,946 INFO : {
  "level 4": {"panorama": {
    "method": "PUT",
    "url": "https://panoramaweb.org/_webdav/LINCS/P100/%40files/GCT/LINCS_P100_DIA_Plate39_annotated_minimized_2018-05-02_20-24-43_LVL4.gct"
  }},
  "assay": "P100",
  "name": "LINCS_P100_DIA_Plate39_annotated_minimized_2018-05-02_20-24-43",
  "config": {"panorama": {
    "method": "PUT",
    "url": "https://panoramaweb.org/_webdav/LINCS/P100/%40files/GCT/LINCS_P100_DIA_Plate39_annotated_minimized_2018-05-02_20-24-43.cfg"
  }},
  "level 2": {"panorama": {
    "method": "GET",
    "url": "https://panoramaweb.org/lincs/LINCS/P100/runGCTReportApi.view?runId=31255&remote=true&reportName=GCT%20File%20P100"
  }},
  "level 3": {"panorama": {
    "method": "PUT",
    "url": "https://panoramaweb.org/_webdav/LINCS/P100/%40files/GCT/LINCS_P100_DIA_Plate39_annotated_minimized_2018-05-02_20-24-43_LVL3.gct"
  }}
}
09 Jun 2019 10:50:31,947 INFO : Sending POST request to https://api.clue.io/api/psp
09 Jun 2019 10:50:32,110 INFO : Response code - 200
09 Jun 2019 10:50:32,110 INFO : Response from server: {"name":"LINCS_P100_DIA_Plate39_annotated_minimized_2018-05-02_20-24-43","assay":"P100","status":"Waiting_To_Download","id":"5cfd46e8344c151e38c98d58","created":"2019-06-09T17:50:32.006Z","last_modified":"2019-06-09T17:50:32.006Z","level 2":{"panorama":{"method":"GET","url":"https://panoramaweb.org/lincs/LINCS/P100/runGCTReportApi.view?runId=31255&remote=true&reportName=GCT%20File%20P100"}},"level 3":{"panorama":{"method":"PUT","url":"https://panoramaweb.org/_webdav/LINCS/P100/%40files/GCT/LINCS_P100_DIA_Plate39_annotated_minimized_2018-05-02_20-24-43_LVL3.gct"}},"level 4":{"panorama":{"method":"PUT","url":"https://panoramaweb.org/_webdav/LINCS/P100/%40files/GCT/LINCS_P100_DIA_Plate39_annotated_minimized_2018-05-02_20-24-43_LVL4.gct"}},"config":{"panorama":{"method":"PUT","url":"https://panoramaweb.org/_webdav/LINCS/P100/%40files/GCT/LINCS_P100_DIA_Plate39_annotated_minimized_2018-05-02_20-24-43.cfg"}}}
09 Jun 2019 10:50:32,111 INFO : Sent POST request to https://api.clue.io/api/psp
09 Jun 2019 10:50:32,113 INFO : Checking status of job 5cfd46e8344c151e38c98d58
09 Jun 2019 10:50:32,220 INFO : Status: Waiting_To_Download
09 Jun 2019 10:50:52,221 INFO : Checking status of job 5cfd46e8344c151e38c98d58
09 Jun 2019 10:50:52,474 INFO : Status: created LVL 3 GCT
09 Jun 2019 10:51:12,475 INFO : Checking status of job 5cfd46e8344c151e38c98d58
09 Jun 2019 10:51:12,724 INFO : Status: POUR : succeeded in uploading all GCTs to Panorama
09 Jun 2019 10:51:12,724 INFO : PSP job completed with status: POUR : succeeded in uploading all GCTs to Panorama
09 Jun 2019 10:51:12,724 INFO : Finished running LINCS PSP pipeline.
09 Jun 2019 10:51:12,724 INFO : Successfully completed task 'org.labkey.lincs.psp.LincsPspTask'