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GCP

GCP

LINCS Data

 
Level 1
Level 2
Level 3
Level 4
Config
Plate15Epigenetic DrugsMCF7 Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2018-05-02 19:57:30
Plate16Epigenetic DrugsNPC Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2018-05-09 08:23:35
Plate17Epigenetic DrugsA375 Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2018-05-07 11:19:35
Plate18Epigenetic DrugsPC3 Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2018-05-07 11:29:28
Plate19Epigenetic DrugsA549 Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2018-05-07 11:48:56
Plate20Neuroactive DrugsNPC Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2018-05-07 12:48:35
Plate22Neuroactive DrugsA375 Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2018-05-15 11:25:08
Plate23Neuroactive DrugsMCF7 Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2018-05-07 11:39:35
Plate24Neuroactive DrugsPC3 Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2018-05-07 13:51:07
Plate25Neuroactive DrugsA549 Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2018-05-07 13:22:00
Plate27Kinase InhibitorsNPC Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2018-05-07 11:59:25
Plate28Kinase InhibitorsA375 Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2018-05-07 12:09:15
Plate29Kinase InhibitorsMCF7 Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2018-05-15 10:59:26
Plate30Epigenetic DrugsYAPC Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2018-05-07 13:40:51
Plate31Neuroactive DrugsYAPC Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2018-05-07 14:01:17
Plate32Kinase InhibitorsYAPC Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2018-05-07 12:59:16
Plate33Kinase InhibitorsA549 Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2018-05-07 12:30:28
Plate34Kinase InhibitorsPC3 Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2019-10-17 10:18:09
Plate35Targeted Oncology Drugs - Dose ResponseMCF10A Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2018-05-15 11:09:14
Plate38Cardioactive, Cardiotoxic, and Epigenetic DrugsHUVEC Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2018-05-07 12:18:16
Plate39Cardioactive, Cardiotoxic, and Epigenetic DrugsHAoSMC Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2018-05-07 12:39:00
Plate40Epigenetic Gene CRISPR Set 1A375-311 Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2017-02-15 14:30:33
Plate41Epigenetic Gene CRISPR Set 2A375-311 Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2016-11-18 13:25:29
Plate42Epigenetic Gene CRISPR Set 3A375-311 Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2016-11-18 13:29:17
Plate44Epigenetic Gene CRISPR Set 1YAPC-311 Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2017-04-18 14:04:45
Plate45Haggarty Collab Plate 1179, 215 Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2018-05-09 08:03:40
Plate46Haggarty Collab Plate 2170, 177 Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2018-05-09 08:13:32
Plate47Epigenetic Gene CRISPR Set 2YAPC-311 Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2017-04-18 14:08:34
Plate48Epigenetic Gene CRISPR Set 3YAPC-311 Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2017-04-26 13:41:49
Plate51Epigenetic Gene CRISPR Set 1A549-311 Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2017-08-28 13:17:43
Plate52Epigenetic Gene CRISPR Set 2A549-311 Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2017-08-16 11:33:23
Plate53Epigenetic Gene CRISPR Set 3A549-311 Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2017-08-17 11:58:09
Plate57Cardioactive, Cardiotoxic, and Epigenetic DrugsHUVEC Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2018-05-10 07:22:19
Plate58Cardiotoxic DrugsA549 Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2018-01-02 11:32:39
Plate59Cardiotoxic DrugsA375 Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2019-09-26 13:37:55
Plate60Cardiotoxic DrugsMCF7 Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2018-04-20 11:41:23
Plate61Cardiotoxic DrugsPC3 Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2018-01-10 08:39:45
Plate62Cardiotoxic DrugsYAPC Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2018-04-20 11:43:24
Plate63Cardiotoxic DrugsNPC Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2019-09-12 09:00:39
Plate64Epigenetic DrugsAstrocyte Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2018-04-20 11:45:18
Plate65Neuroactive DrugsAstrocyte Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2019-10-17 13:01:29
Plate66Kinase InhibitorsAstrocyte Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2018-09-05 08:49:28
Plate67Cardiotoxic DrugsAstrocyte Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2018-07-18 13:44:51
Plate70Tsai Lab/Alzheimer's Disease genetic variantsAstrocyte, NPC Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2019-12-16 14:24:41
Plate71aDown Syndrome Cell LinesNPC Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2019-06-10 15:10:43
Plate71bDown Syndrome Cell LinesNPC Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2019-06-10 15:12:44
Plate72Growth Factors (LINCS Common Project)MCF10a Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2019-12-16 13:54:21
Plate73CDK inhibitorsBT549 Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2019-04-16 08:47:20
Plate74CDK inhibitorsMCF7 Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2019-04-16 10:23:36
Plate75CDK inhibitorsHs578T Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2019-04-16 10:42:55
Plate76CDK inhibitorsPDX1258 Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2019-04-29 12:47:49
Plate77CDK inhibitorsMCF10a Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2019-04-17 06:23:48
Plate78Drug Combinations (2 compounds) A375A375 Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2019-08-14 09:03:45
Plate79Drug Combinations (9 combinations) A375A375 Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2019-08-14 09:11:57
Plate80Drug Combinations (2 compounds) A375A375 Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2019-08-14 09:15:19
Plate81Drug Combinations (9 combinations) MCF7MCF7 Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2019-09-11 06:09:25
Plate82Drug Combinations (2 compounds) MCF7MCF7 Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2019-09-23 08:25:29
Plate83WT/MUT PSEN1 Lines +/- Compound (Tsai Lab)NPC Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2020-01-06 12:00:58
Plate84APP Genetic Variants + DrugsNPC Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2019-10-16 12:43:58
Plate85Drug Combinations (9 combinations) A549A549 Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2019-11-15 12:31:10
Plate86Drug Combinations (9 combinations) PC3PC3 Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2019-10-30 08:15:51
Plate87Drug Combinations (2 compounds) A549A549 Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2019-10-16 15:01:36
Plate88Drug Combinations (2 compounds) PC3PC3 Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2019-10-16 08:39:52
Plate89Drug Combinations (2 compounds) YAPCYAPC Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2019-10-23 08:25:32
Plate94Epigenetic DrugsPericytes Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2020-04-03 13:19:56
Plate95Neuroactive DrugsPericytes Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2020-04-03 08:34:31
Plate96Kinase InhibitorsPericyte Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2021-02-02 10:49:23
Plate97Neuroactive DrugsPericyte Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2021-02-02 11:16:16
PlateCPTACSEE NOTE BC TumorsBasal, Her2, LumA, LumB, Normal, xx Skyline  GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   GCT  [ View in Morpheus  ]   CFG 2018-05-10 07:46:54
PlateZWhitesell CollabA375_WI, BT-112, BT-320, BT-474, H838, IMR-32, MCF7_WI, MDA MB-468, NCI-H146, NCI-H187, NCI-H82, Ovcar-3/T1, Ovsaho/T1, SKMEL239, SUM-159/BC, T-47D Skyline  GCT  [ View in Morpheus  ] NOT AVAILABLENOT AVAILABLENOT AVAILABLE2018-01-02 13:48:01

LINCS PCCSE Data Quick Access Table

 

Quick Links (Levels 1,2,4 data):

ALL P100 DATA  ALL GCP DATA 

 

Quick Level 4 Data Visualization (& Download):

Note: this is probably what you want!  For rapid access to visualizations of data, use the table below. Clicking on any link will lead to a visualization of data that we have collected. Each cell is a plate ID number followed by links to the data where available. Links beginning with "P" point to P100 data, while links beginning with "G" point to GCP data. The numbers after the leading character describe length of compound treatment before samples were harvested. All P100 data is acquired in DIA unless otherwise marked.

  MCF7 PC3 A549 A375 YAPC NPC Astrocytes
Epigenetically-active drugs 15 P3/G24 18 P3/G24 19 P3/G24 17 P3/G24 30 P3/G24 16 P3/G24 64 P3/G24
Neurodevelopmental drugs 23 P3/G24 24 P3/G24 25 P3/G24 22 P3/G24 31 P3/G24 20 P3/G24 65 P3/G24
Kinase/Pathway Inhibitors 29 P3/P6/P24/G24 34 P3/G24 33 P3/G24 28 P3/G24 32 P3/G24 27 P3/G24 66 P3/G24
Cardiotoxic drugs 60 P3/G24 61 P3/G24 58 P3/G24 59 P3/G24 62 P3/G24 63 P3/G24 67 P3/G24

Click here for more information on LINCS PCCSE Data Levels.

CUSTOM SUBSETTING OF

LEVEL 4 P100 DATA

CUSTOM SUBSETTING OF

LEVEL 4 GCP DATA

Targeted MS Runs

 
Clustergrammer Heatmap
Download
7memberCommunity_PlateB.sky.zip
3 MB 
2025-07-02 21:47:56501212247
7memberCommunity_PlateA.sky.zip
3 MB 
2025-07-02 21:47:56501212247
7memberCommunity_PlateD.sky.zip
3 MB 
2025-07-02 21:47:56501212247
7memberCommunity_PlateC.sky.zip
3 MB 
2025-07-02 21:47:56501212247
7memberCommunity_PlateB.sky.zip
3 MB 
2025-07-02 21:47:56501212247
210723-ATI-barley-Pt14_2025-02-24_01-08-00.sky.zip
21 MB 
2025-07-02 20:45:211010198733
210423-ATI-barley-Pt13_2025-02-24_01-07-11.sky.zip
17 MB 
2025-07-02 20:45:201010194027
210416-ATI-barley-Pt12_2025-02-24_01-06-33.sky.zip
26 MB 
2025-07-02 20:45:181010193843
210415-ATI-barley-Pt11_2025-02-24_01-05-41.sky.zip
17 MB 
2025-07-02 20:45:161010194029
210302-ATI-barley-Pt10_2025-02-24_01-05-05.sky.zip
21 MB 
2025-07-02 20:45:151010194234
210224-ATI-barley-Pt9_2025-02-24_01-04-22.sky.zip
19 MB 
2025-07-02 20:45:131010194031
210217-ATI-barley-Pt8_2025-02-24_01-03-46.sky.zip
18 MB 
2025-07-02 20:45:121010194029
210210-ATI-barley-Pt7_2025-02-24_01-03-02.sky.zip
19 MB 
2025-07-02 20:45:101010194631
210203-ATI-barley-Pt6_2025-02-24_01-02-20.sky.zip
19 MB 
2025-07-02 20:45:091010195031
210129-ATI-barley-Pt5_2025-02-24_01-01-22.sky.zip
19 MB 
2025-07-02 20:45:071010195831
200731-ATI-barley-Pt4_2025-02-24_01-00-26.sky.zip
12 MB 
2025-07-02 20:45:061010198719
200717-ATI-barley-Pt3_2025-02-24_00-58-01.sky.zip
35 MB 
2025-07-02 20:45:041010198755
200709-ATI-barley-Pt2-Response_2025-02-24_00-56-48.sky.zip
4 MB 
2025-07-02 20:45:01101019957
200709-ATI-barley-Pt2_2025-02-24_00-55-11.sky.zip
23 MB 
2025-07-02 20:45:011010199136
200602-ATI-barley-Pt1_2025-02-24_00-25-35.sky.zip
19 MB 
2025-07-02 20:44:591010199331
TPAD_CSF1A_Batch1-multiNF-DIANN.sky.zip
3 GB 
2025-07-01 17:49:472,85327,12832,575259,53243
TPAD_CSF1A_Batch1-multiNF-DIANN-grouped.sky.zip
3 GB 
2025-07-01 17:41:312,67226,43931,769253,11943
TPAD_CSF1B_Batch2-multiNF-DIANN.sky.zip
3 GB 
2025-07-01 15:26:132,85327,12832,575259,53241
TPAD_CSF1B_Batch2-multiNF-DIANN-grouped.sky.zip
3 GB 
2025-07-01 15:17:422,67226,43931,769253,11941
TPAD_CSF2A_Batch3-multiNF-DIANN.sky.zip
2 GB 
2025-07-01 14:13:302,85327,12832,575259,53243
TPAD_CSF2A_Batch3-multiNF-DIANN-grouped.sky.zip
2 GB 
2025-07-01 14:04:582,67226,43931,769253,11943
TPAD_CSF2B_Batch4-multiNF-DIANN.sky.zip
2 GB 
2025-07-01 11:21:372,85327,12832,575259,53243
TPAD_CSF2B_Batch4-multiNF-DIANN-grouped.sky.zip
2 GB 
2025-07-01 11:09:482,67226,43931,769253,11943
TPAD_CSF3A_Batch5-multiNF-DIANN.sky.zip
3 GB 
2025-06-30 15:31:332,85327,12832,575259,53243
TPAD_CSF3A_Batch5-multiNF-DIANN-grouped.sky.zip
3 GB 
2025-06-30 15:23:252,67226,43931,769253,11943
TPAD_CSF3B_Batch6-multiNF-DIANN.sky.zip
2 GB 
2025-06-30 14:43:542,85327,12832,575259,53241
TPAD_CSF3B_Batch6-multiNF-DIANN-grouped.sky.zip
2 GB 
2025-06-30 14:36:142,67226,43931,769253,11941
TPAD_CSF4_Batch7-multiNF-DIANN.sky.zip
2 GB 
2025-06-30 13:55:172,85327,12832,575259,53242
TPAD_CSF4_Batch7-multiNF-DIANN-grouped.sky.zip
2 GB 
2025-06-30 13:46:482,67226,43931,769253,11942
TPAD_CSF5_Batch8-multiNF-DIANN.sky.zip
3 GB 
2025-06-30 13:02:062,85327,12832,575259,53254
TPAD_CSF5_Batch8-multiNF-DIANN-grouped.sky.zip
3 GB 
2025-06-30 11:52:172,67226,43931,769253,11954
METRIC_Eclipse_PSB_All_QCs_2025-06-27_01-27-04.sky.zip
27 MB 
2025-06-26 22:27:151666233
Exp_CSF_GPF_A_2024-05-06_21-16-47.sky.zip
285 MB 
2025-06-25 18:12:201,8297,3787,37855,0401
2024-05 CSF LIT GPF-MSFragger-3.sky.zip
1 GB 
2025-06-25 18:12:201,0825,0956,01940,4016
240207_gpf_2024-06-04_10-24-18.sky.zip
168 MB 
2025-06-25 18:12:201,2886,98410,593126,0861
230305_ev2_prm_final_inj1_2024-06-04_07-32-10.sky.zip
267 MB 
2025-06-25 18:12:207222,0892,08914,44942
230124_p2_neo_30min_3500targets_opt_trans_pepleveldilution_2024-06-04_06-58-16.sky.zip
292 MB 
2025-06-25 18:12:201,0273,5013,50111,42041
CSF_neurod105_assay_individuals_manual_2024-06-03_15-26-36.sky.zip
426 MB 
2025-06-25 18:12:201029029026,34537
Exp_CSF_MMCC_quant_all_adjBound_opttrans_nochick_2024-06-03_14-53-02.sky.zip
708 MB 
2025-06-25 18:12:201,2058,3748,37424,93427
OT_GPF_PRM_survey_MMCC_boundaries_opttrans_nochick_2024-06-03_14-36-08.sky.zip
266 MB 
2025-06-25 18:12:201,2801,9711,9715,80127
LIT_GPF_survey_newAlign_MMCC_boundaries_opttrans_nochick_2024-06-02_15-26-11.sky.zip
313 MB 
2025-06-25 18:12:207982,0352,0355,99827
Aducanumab_Selectivity_2025-06-19_12-58-48.sky.zip
3 MB 
2025-06-19 09:59:0644851236
hela_isolation_window_concentration_2000ng.sky.zip
41 GB 
2025-06-02 18:36:1910,365188,947223,7653,101,14818
hela_isolation_window_experiment_200ng.sky.zip
26 GB 
2025-06-02 18:36:1910,365188,947223,7653,101,14818
hela_isolation_window_experiment_500ng.sky.zip
31 GB 
2025-06-02 18:36:1910,364188,947223,7653,101,14818
hela_isolation_window_experiment_1000ng.sky.zip
36 GB 
2025-06-02 18:36:1910,365188,947223,7653,101,14818
2025-0405-MMCC-EV-Astral-noimpute_2025-05-29_11-52-05.sky.zip
6 GB 
2025-06-02 18:36:194,90737,54742,331335,89142
2025-0405-MMCC-EV-Actis-noimpute_2025-05-29_11-46-45.sky.zip
7 GB 
2025-06-02 18:36:195,18541,97847,810380,07242
SMTG-low-value-imputed_2025-05-01_14-22-15.sky.zip
78 GB 
2025-06-01 21:38:1710,383187,220217,1092,214,24878
SMTG-MissForest-imputed_2025-05-01_11-41-41.sky.zip
79 GB 
2025-06-01 20:04:5710,383187,220217,1092,214,24878
SMTG-nettle-imputed_2025-04-30_12-25-18.sky.zip
147 GB 
2025-06-01 18:16:1410,639215,139251,4792,483,95978
SMTG-unimputed_2025-04-30_08-55-40.sky.zip
90 GB 
2025-06-01 13:32:5610,639215,139251,4792,483,95978
TEI-REX-unimputed_2025-04-29_15-46-15.sky.zip
63 GB 
2025-06-01 11:49:381,30749,85259,007585,98796
TEI-REX-nettle-imputed_2025-04-29_13-36-50.sky.zip
63 GB 
2025-06-01 11:15:251,30749,85259,007585,98796
MagNet-holdout-nettle-imputed_2025-05-01_08-50-25.sky.zip
9 GB 
2025-06-01 09:40:175,29914,11015,07460,28842
hela_isolation_window_concentration_2000ng.sky.zip
41 GB 
2025-05-30 15:25:4610,365188,947223,7653,101,14818
ecoli_large_replicates_loaded_refined_2024-05-30_14-02-04.sky.zip
44 MB 
2025-05-30 12:00:183669899894,9408
ecoli_large_replicates_loaded_2024-05-30_14-00-59.sky.zip
45 MB 
2025-05-30 12:00:184611,3021,3027,5248
ecoli_large_replicates_2024-05-30_14-00-05.sky.zip
20 MB 
2025-05-30 12:00:184611,3021,3027,5240
ecoli_subset_replicates_refined_cv_2024-05-30_13-58-18.sky.zip
45 MB 
2025-05-30 12:00:187592,2662,26612,8072
ecoli_subset_replicates_refined_2024-05-30_13-57-25.sky.zip
46 MB 
2025-05-30 12:00:187592,4372,43713,6022
ecoli_subset_replicates_2024-05-30_13-56-16.sky.zip
47 MB 
2025-05-30 12:00:187592,4372,44130,8572
gpf_results_importer_2024-05-30_13-54-14.sky.zip
70 MB 
2025-05-30 12:00:181,1925,3967,42785,6731
gpf_results_manual_2024-05-30_13-52-23.sky.zip
108 MB 
2025-05-30 12:00:181,1925,3967,42785,6731
pq500_100spd_plasma_final_lightheavy_replicates_2024-05-30_13-50-10.sky.zip
37 MB 
2025-05-30 11:58:415798181,62213,69910
pq500_60spd_plasma_final_lightheavy_replicates_2024-05-30_13-48-26.sky.zip
45 MB 
2025-05-30 11:58:415798181,62213,87610
pq500_100spd_plasma_final_replicates_2024-05-30_13-47-38.sky.zip
19 MB 
2025-05-30 11:58:415798188187,08110
pq500_60spd_plasma_final_replicates_2024-05-30_13-46-43.sky.zip
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2025-05-30 11:58:415798188186,97710
pq500_100spd_plasma_multireplicate_results_refined_2024-05-30_13-46-07.sky.zip
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2025-05-30 11:58:415798188187,0811
pq500_60spd_plasma_multireplicate_results_refined_2024-05-30_13-45-40.sky.zip
6 MB 
2025-05-30 11:58:415798188186,9771
pq500_100spd_plasma_multireplicate_results_2024-05-30_13-45-07.sky.zip
25 MB 
2025-05-30 11:58:415798188187,6512
pq500_60spd_plasma_multireplicate_results_2024-05-30_13-44-21.sky.zip
36 MB 
2025-05-30 11:58:415798188187,6012
pq500_100spd_neat_multireplicate_results_refined_2024-05-30_13-43-42.sky.zip
18 MB 
2025-05-30 11:58:415798188187,6891
pq500_60spd_neat_multireplicate_results_refined_2024-05-30_13-43-05.sky.zip
30 MB 
2025-05-30 11:58:415798188187,6011
pq500_100spd_neat_multireplicate_results_2024-05-30_13-42-26.sky.zip
18 MB 
2025-05-30 11:58:4157981881811,0881
pq500_60spd_neat_multireplicate_results_2024-05-30_13-41-26.sky.zip
30 MB 
2025-05-30 11:58:4157981881811,0881
pq500_60spd_neat_multireplicate_2024-05-30_13-40-53.sky.zip
633 KB 
2025-05-30 11:58:4157981881811,0880
hela_isolation_window_experiment_200ng.sky.zip
26 GB 
2025-05-30 01:29:3910,365188,947223,7653,101,14818
hela_isolation_window_experiment_500ng.sky.zip
31 GB 
2025-05-30 00:53:5310,364188,947223,7653,101,14818
hela_isolation_window_experiment_1000ng.sky.zip
36 GB 
2025-05-29 23:15:1110,365188,947223,7653,101,14818
2025-0405-MMCC-EV-Astral-noimpute_2025-05-29_11-52-05.sky.zip
6 GB 
2025-05-29 12:13:324,90737,54742,331335,89142
2025-0405-MMCC-EV-Actis-noimpute_2025-05-29_11-46-45.sky.zip
7 GB 
2025-05-29 12:03:295,18541,97847,810380,07242
20240709_OBIPhA.sky.zip
155 MB 
2025-05-16 09:25:513333723512
Swaney-IPMS-Data-DIANN_2025-05-15_11-53-43.sky.zip
2 GB 
2025-05-15 12:02:265,18545,78152,836422,66115
Vial Comparison Post 01152025 v1 (not daily)_2025-04-29_15-52-29.sky.zip
6 MB 
2025-04-30 21:22:2310242419
Vial Comparison Pre v2_2025-04-29_15-49-25.sky.zip
17 MB 
2025-04-30 21:22:2310242423
ATI_Samples_2023_2025-04-26_13-39-03.sky.zip
29 MB 
2025-04-28 10:30:1413244828042
ATI_Response_2023_2025-04-26_13-25-06.sky.zip
12 MB 
2025-04-28 10:30:1413244828018
ATI_Samples_2022_2025-02-20_23-31-07.sky.zip
7 MB 
2025-04-28 10:30:1012234626848
ATI_Samples_2021_2025-02-20_23-21-52.sky.zip
5 MB 
2025-04-28 10:30:0812234626830
2023_ATIsamples_circe_2025-02-20_13-24-11.sky.zip
27 MB 
2025-04-25 14:58:1713224325096
2022_ATIsamples_circe_2025-02-20_13-17-06.sky.zip
27 MB 
2025-04-25 14:58:0912224325097
2021_ATIsamples_circe_2025-02-20_13-06-53.sky.zip
27 MB 
2025-04-25 14:58:0212224325094
deamidation_localization_gS_7-18_2025-04-24_20-52-46.sky.zip
37 MB 
2025-04-25 12:05:18144181
synthetic_heavy_gS_peptides_4-21-25_2025-04-21_16-42-22.sky.zip
106 MB 
2025-04-25 12:05:1516116632

Mass Spec Search

 

Messages

 
Showing: all messages
Plate 65 re-release
karen 2019-10-17 13:37:13

Compound KN-93 had incorrect pert_dose in column metadata; corrected from 10 uM to 0.1 uM.

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Plate 34 re-release
karen 2019-10-17 12:52:06

Compound BYL719 had incorrect pert_dose in column metadata; corrected from 10 uM to 0.25 uM.

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Plate 59 re-release
karen 2019-10-03 08:35:36

Two raw files were incorrectly labeled in original release: TM20171002_GCP_Y4Q1_Plate_59_T4_A375_G-0059_F07_acq_02.raw was corrected to TM20171013_GCP_Y4Q1_Plate_59_T4_A375_G-0059_F07_acq_02.raw, and TM20171002_GCP_Y4Q1_Plate_59_T4_A375_G-0059_F08_acq_02.raw was corrected to TM20171013_GCP_Y4Q1_Plate_59_T4_A375_G-0059_F08_acq_02.raw.

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Plate 63 re-release
karen 2019-09-12 11:27:29

Compound Taxol had incorrect pert_dose in column metadata; corrected from 0 uM to 1 uM. Additionally, compound Trametinib had incorrect pert_dose in column metadata; corrected from 0 uM to 0.1 uM.

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GCP Plate 76 Filename inaccuracy with metadata
jmulla 2019-05-03 12:13:38

During acquisition, filenames did not align with proper sample positions. As a result, filenames in Skyline, gcts, and raw files differ from annotated metadata. Refer to metadata for correct annotation of sample.

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EMBARGO NOTE - CPTAC DATA
Jake Jaffe 2018-05-04 08:29:29
These data are embargoed until 7/1/2019 for publication.
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