03 Apr 2020 14:02:50,448 INFO : Re-running LINCS pipeline on PSP for: LINCS_GCP_Plate95_annotated_minimized_2020-04-03_11-33-00 03 Apr 2020 14:02:50,448 INFO : ======================================= 03 Apr 2020 14:31:08,745 INFO : Starting to run task 'org.labkey.lincs.psp.LincsPspTask' at location 'webserver-high-priority' 03 Apr 2020 14:31:08,745 INFO : Running LINCS PSP pipeline for LINCS_GCP_Plate95_annotated_minimized_2020-04-03_11-33-00 03 Apr 2020 14:31:08,745 INFO : Resubmitting job for runId: 85312, name: LINCS_GCP_Plate95_annotated_minimized_2020-04-03_11-33-00 03 Apr 2020 14:31:08,745 INFO : Old job details: 03 Apr 2020 14:31:08,745 INFO : Id: 301 03 Apr 2020 14:31:08,745 INFO : Pipeline job Id: 85531 03 Apr 2020 14:31:08,745 INFO : Run Id: 85312 03 Apr 2020 14:31:08,745 INFO : PSP Job Id: 5e8757f594eb970011cc001b 03 Apr 2020 14:31:08,745 INFO : PSP Job name: LINCS_GCP_Plate95_annotated_minimized_2020-04-03_11-33-00 03 Apr 2020 14:31:08,745 INFO : PSP Job status: Waiting_To_Download 03 Apr 2020 14:31:08,745 INFO : JSON: {"level 4":{"panorama":{"method":"PUT","url":"https://panoramaweb.org/_webdav/LINCS/GCP/%40files/GCT/LINCS_GCP_Plate95_annotated_minimized_2020-04-03_11-33-00_LVL4.gct"}},"assay":"GCP","created":"2020-04-03T15:36:21.995Z","name":"LINCS_GCP_Plate95_annotated_minimized_2020-04-03_11-33-00","id":"5e8757f594eb970011cc001b","last_modified":"2020-04-03T15:36:21.995Z","config":{"panorama":{"method":"PUT","url":"https://panoramaweb.org/_webdav/LINCS/GCP/%40files/GCT/LINCS_GCP_Plate95_annotated_minimized_2020-04-03_11-33-00.cfg"}},"level 2":{"panorama":{"method":"GET","url":"https://panoramaweb.org/lincs/LINCS/GCP/runGCTReportApi.view?runId=85312&remote=true&reportName=GCT%20File%20GCP"}},"status":"Waiting_To_Download","level 3":{"panorama":{"method":"PUT","url":"https://panoramaweb.org/_webdav/LINCS/GCP/%40files/GCT/LINCS_GCP_Plate95_annotated_minimized_2020-04-03_11-33-00_LVL3.gct"}}} 03 Apr 2020 14:31:08,745 INFO : Resubmitting... 03 Apr 2020 14:31:08,747 INFO : Looking for existing job with name LINCS_GCP_Plate95_annotated_minimized_2020-04-03_11-33-00 03 Apr 2020 14:31:08,869 INFO : Job with name LINCS_GCP_Plate95_annotated_minimized_2020-04-03_11-33-00exists. 03 Apr 2020 14:31:08,869 INFO : Looking for existing job with name LINCS_GCP_Plate95_annotated_minimized_2020-04-03_11-33-00_2 03 Apr 2020 14:31:08,991 INFO : PSP job name: LINCS_GCP_Plate95_annotated_minimized_2020-04-03_11-33-00_2 03 Apr 2020 14:31:08,992 INFO : Sending JSON: 03 Apr 2020 14:31:08,992 INFO : { "level 4": {"panorama": { "method": "PUT", "url": "https://panoramaweb.org/_webdav/LINCS/GCP/%40files/GCT/LINCS_GCP_Plate95_annotated_minimized_2020-04-03_11-33-00_LVL4.gct" }}, "assay": "GCP", "name": "LINCS_GCP_Plate95_annotated_minimized_2020-04-03_11-33-00_2", "config": {"panorama": { "method": "PUT", "url": "https://panoramaweb.org/_webdav/LINCS/GCP/%40files/GCT/LINCS_GCP_Plate95_annotated_minimized_2020-04-03_11-33-00.cfg" }}, "level 2": {"panorama": { "method": "GET", "url": "https://panoramaweb.org/lincs/LINCS/GCP/runGCTReportApi.view?runId=85312&remote=true&reportName=GCT%20File%20GCP" }}, "level 3": {"panorama": { "method": "PUT", "url": "https://panoramaweb.org/_webdav/LINCS/GCP/%40files/GCT/LINCS_GCP_Plate95_annotated_minimized_2020-04-03_11-33-00_LVL3.gct" }} } 03 Apr 2020 14:31:08,992 INFO : Sending POST request to https://api.clue.io/api/psp 03 Apr 2020 14:31:09,547 INFO : Response code - 200 03 Apr 2020 14:31:09,547 INFO : Response from server: {"name":"LINCS_GCP_Plate95_annotated_minimized_2020-04-03_11-33-00_2","assay":"GCP","status":"Waiting_To_Download","id":"5e87ab1d94eb970011cc013c","created":"2020-04-03T21:31:09.060Z","last_modified":"2020-04-03T21:31:09.060Z","level 2":{"panorama":{"method":"GET","url":"https://panoramaweb.org/lincs/LINCS/GCP/runGCTReportApi.view?runId=85312&remote=true&reportName=GCT%20File%20GCP"}},"level 3":{"panorama":{"method":"PUT","url":"https://panoramaweb.org/_webdav/LINCS/GCP/%40files/GCT/LINCS_GCP_Plate95_annotated_minimized_2020-04-03_11-33-00_LVL3.gct"}},"level 4":{"panorama":{"method":"PUT","url":"https://panoramaweb.org/_webdav/LINCS/GCP/%40files/GCT/LINCS_GCP_Plate95_annotated_minimized_2020-04-03_11-33-00_LVL4.gct"}},"config":{"panorama":{"method":"PUT","url":"https://panoramaweb.org/_webdav/LINCS/GCP/%40files/GCT/LINCS_GCP_Plate95_annotated_minimized_2020-04-03_11-33-00.cfg"}}} 03 Apr 2020 14:31:09,547 INFO : Sent POST request to https://api.clue.io/api/psp 03 Apr 2020 14:31:09,549 INFO : Checking status of job 5e87ab1d94eb970011cc013c 03 Apr 2020 14:31:09,672 INFO : Status: Waiting_To_Download 03 Apr 2020 14:31:29,673 INFO : Checking status of job 5e87ab1d94eb970011cc013c 03 Apr 2020 14:31:29,947 INFO : Status: created LVL2 GCT 03 Apr 2020 14:31:49,947 INFO : Checking status of job 5e87ab1d94eb970011cc013c 03 Apr 2020 14:31:50,224 INFO : Status: created LVL2 GCT 03 Apr 2020 14:32:10,225 INFO : Checking status of job 5e87ab1d94eb970011cc013c 03 Apr 2020 14:32:10,580 INFO : Status: created LVL2 GCT 03 Apr 2020 14:32:30,580 INFO : Checking status of job 5e87ab1d94eb970011cc013c 03 Apr 2020 14:32:30,852 INFO : Status: created LVL2 GCT 03 Apr 2020 14:32:50,853 INFO : Checking status of job 5e87ab1d94eb970011cc013c 03 Apr 2020 14:32:51,120 INFO : Status: created LVL2 GCT 03 Apr 2020 14:33:11,121 INFO : Checking status of job 5e87ab1d94eb970011cc013c 03 Apr 2020 14:33:11,396 INFO : Status: created LVL2 GCT 03 Apr 2020 14:33:31,396 INFO : Checking status of job 5e87ab1d94eb970011cc013c 03 Apr 2020 14:33:31,751 INFO : Status: created LVL2 GCT 03 Apr 2020 14:33:51,752 INFO : Checking status of job 5e87ab1d94eb970011cc013c 03 Apr 2020 14:33:52,027 INFO : Status: created LVL2 GCT 03 Apr 2020 14:34:12,027 INFO : Checking status of job 5e87ab1d94eb970011cc013c 03 Apr 2020 14:34:12,304 INFO : Status: created LVL2 GCT 03 Apr 2020 14:34:32,304 INFO : Checking status of job 5e87ab1d94eb970011cc013c 03 Apr 2020 14:34:32,576 INFO : Status: created LVL 3 GCT 03 Apr 2020 14:34:52,576 INFO : Checking status of job 5e87ab1d94eb970011cc013c 03 Apr 2020 14:34:52,926 INFO : Status: POUR : succeeded in uploading all GCTs to Panorama 03 Apr 2020 14:34:52,926 INFO : PSP job completed with status: POUR : succeeded in uploading all GCTs to Panorama 03 Apr 2020 14:34:52,926 INFO : Finished running LINCS PSP pipeline. 03 Apr 2020 14:34:52,926 INFO : Successfully completed task 'org.labkey.lincs.psp.LincsPspTask'