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Skyline document import - LINCS_GCP_Plate72_annotated_minimized_2019-12-16_16-53-04.sky.zip

GCP

Job Status

Created: 2019-12-16 13:54:21
Modified: 2020-06-01 16:36:20
Email: jmulla@broadinstitute.org
Status: COMPLETE
Info:
Description: Skyline document import - LINCS_GCP_Plate72_annotated_minimized_2019-12-16_16-53-04.sky.zip
File Path: /data/labkey/files/LINCS/GCP/@files/LINCS_GCP_Plate72_annotated_minimized_2019-12-16_16-53-04.sky_2019-12-16_13-54-21.log
Files: LINCS_GCP_Plate72_annotated_minimized_2019-12-16_16-53-04.sky_2019-12-16_13-54-21.log
Completed Runs: LINCS_GCP_Plate72_annotated_minimized_2019-12-16_16-53-04.sky.zip
Show Grid Data Browse Files

Log File


16 Dec 2019 13:54:22,005 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
16 Dec 2019 13:54:24,263 INFO : Created temp file because input is from cloud: s3://s3.amazonaws.com/mc-panoramaweb/container836/LINCS_GCP_Plate72_annotated_minimized_2019-12-16_16-53-04.sky.zip
16 Dec 2019 13:54:24,266 INFO : Starting to import Skyline document from LINCS_GCP_Plate72_annotated_minimized_2019-12-16_16-53-04.sky.zip
16 Dec 2019 13:54:24,267 INFO : Expanding Histone2016.blib
16 Dec 2019 13:54:24,272 INFO : Expanding Histone2016.redundant.blib
16 Dec 2019 13:54:24,276 INFO : Expanding LINCS_GCP_Plate72_annotated_minimized.skyd
16 Dec 2019 13:54:24,886 INFO : Expanding LINCS_GCP_Plate72_annotated_minimized.sky.view
16 Dec 2019 13:54:24,887 INFO : Expanding LINCS_GCP_Plate72_annotated_minimized.sky
16 Dec 2019 13:54:25,066 WARN : The version of this Skyline document is 19.12. This is newer than the highest supported version 4.1
16 Dec 2019 13:54:28,670 INFO : Inserting H3K4me0 - BI10003
16 Dec 2019 13:54:30,126 INFO : Total peptides inserted: 1
16 Dec 2019 13:54:30,127 INFO : Inserting H3K4me1 - BI10004
16 Dec 2019 13:54:31,110 INFO : Total peptides inserted: 1
16 Dec 2019 13:54:31,111 INFO : Inserting H3K4me2 - BI10005
16 Dec 2019 13:54:32,564 INFO : Total peptides inserted: 1
16 Dec 2019 13:54:32,564 INFO : Inserting H3K4me3 - BI10006
16 Dec 2019 13:54:34,841 INFO : Total peptides inserted: 1
16 Dec 2019 13:54:34,841 INFO : Inserting H3K4ac1 - BI10007
16 Dec 2019 13:54:35,735 INFO : Total peptides inserted: 1
16 Dec 2019 13:54:35,735 INFO : Inserting H3K9me0K14ac0 - BI10008
16 Dec 2019 13:54:36,815 INFO : Total peptides inserted: 1
16 Dec 2019 13:54:36,815 INFO : Inserting H3K9me1K14ac0 - BI10009
16 Dec 2019 13:54:37,944 INFO : Total peptides inserted: 1
16 Dec 2019 13:54:37,944 INFO : Inserting H3K9me2K14ac0 - BI10010
16 Dec 2019 13:54:38,904 INFO : Total peptides inserted: 1
16 Dec 2019 13:54:38,904 INFO : Inserting H3K9me3K14ac0 - BI10011
16 Dec 2019 13:54:39,923 INFO : Total peptides inserted: 1
16 Dec 2019 13:54:39,923 INFO : Inserting H3K9ac1K14ac0 - BI10012
16 Dec 2019 13:54:40,916 INFO : Total peptides inserted: 1
16 Dec 2019 13:54:40,917 INFO : Inserting H3K9me0K14ac1 - BI10013
16 Dec 2019 13:54:41,929 INFO : Total peptides inserted: 1
16 Dec 2019 13:54:41,929 INFO : Inserting H3K9me1K14ac1 - BI10014
16 Dec 2019 13:54:42,931 INFO : Total peptides inserted: 1
16 Dec 2019 13:54:42,931 INFO : Inserting H3K9me2K14ac1 - BI10015
16 Dec 2019 13:54:43,947 INFO : Total peptides inserted: 1
16 Dec 2019 13:54:43,947 INFO : Inserting H3K9me3K14ac1 - BI10016
16 Dec 2019 13:54:44,921 INFO : Total peptides inserted: 1
16 Dec 2019 13:54:44,921 INFO : Inserting H3K9ac1K14ac1 - BI10017
16 Dec 2019 13:54:45,987 INFO : Total peptides inserted: 1
16 Dec 2019 13:54:45,987 INFO : Inserting H3K9me0S10ph1K14ac0 - BI10018
16 Dec 2019 13:54:46,799 INFO : Total peptides inserted: 1
16 Dec 2019 13:54:46,800 INFO : Inserting H3K9me1S10ph1K14ac0 - BI10019
16 Dec 2019 13:54:48,118 INFO : Total peptides inserted: 1
16 Dec 2019 13:54:48,118 INFO : Inserting H3K9me2S10ph1K14ac0 - BI10020
16 Dec 2019 13:54:48,969 INFO : Total peptides inserted: 1
16 Dec 2019 13:54:48,969 INFO : Inserting H3K9me3S10ph1K14ac0 - BI10021
16 Dec 2019 13:54:49,778 INFO : Total peptides inserted: 1
16 Dec 2019 13:54:49,779 INFO : Inserting H3K9ac1S10ph1K14ac0 - BI10022
16 Dec 2019 13:54:50,562 INFO : Total peptides inserted: 1
16 Dec 2019 13:54:50,562 INFO : Inserting H3K9me0S10ph1K14ac1 - BI10023
16 Dec 2019 13:54:51,517 INFO : Total peptides inserted: 1
16 Dec 2019 13:54:51,517 INFO : Inserting H3K9me1S10ph1K14ac1 - BI10024
16 Dec 2019 13:54:52,158 INFO : Total peptides inserted: 1
16 Dec 2019 13:54:52,158 INFO : Inserting H3K9me2S10ph1K14ac1 - BI10025
16 Dec 2019 13:54:52,962 INFO : Total peptides inserted: 1
16 Dec 2019 13:54:52,962 INFO : Inserting H3K9me3S10ph1K14ac1 - BI10026
16 Dec 2019 13:54:53,765 INFO : Total peptides inserted: 1
16 Dec 2019 13:54:53,765 INFO : Inserting H3K9ac1S10ph1K14ac1 - BI10027
16 Dec 2019 13:54:54,514 INFO : Total peptides inserted: 1
16 Dec 2019 13:54:54,515 INFO : Inserting H3K18ac0K23ac0 - BI10028
16 Dec 2019 13:54:55,368 INFO : Total peptides inserted: 1
16 Dec 2019 13:54:55,368 INFO : Inserting H3K18ac1K23ac0 - BI10029
16 Dec 2019 13:54:56,092 INFO : Total peptides inserted: 1
16 Dec 2019 13:54:56,093 INFO : Inserting H3K18ac0K23ac1 - BI10030
16 Dec 2019 13:54:56,802 INFO : Total peptides inserted: 1
16 Dec 2019 13:54:56,803 INFO : Inserting H3K18ac1K23ac1 - BI10031
16 Dec 2019 13:54:57,555 INFO : Total peptides inserted: 1
16 Dec 2019 13:54:57,555 INFO : Inserting H3K18ub1K23ac0 - BI10032
16 Dec 2019 13:54:58,361 INFO : Total peptides inserted: 1
16 Dec 2019 13:54:58,361 INFO : Inserting H3K18ac0K23ub1 - BI10033
16 Dec 2019 13:54:58,964 INFO : Total peptides inserted: 1
16 Dec 2019 13:54:58,965 INFO : Inserting H3K27me0K36me0 - BI10034
16 Dec 2019 13:55:00,003 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:00,003 INFO : Inserting H3K27me0K36me1 - BI10085
16 Dec 2019 13:55:01,166 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:01,167 INFO : Inserting H3K27me0K36me2 - BI10086
16 Dec 2019 13:55:02,104 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:02,104 INFO : Inserting H3K27me0K36me3 - BI10087
16 Dec 2019 13:55:02,883 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:02,883 INFO : Inserting H3K27me1K36me0 - BI10035
16 Dec 2019 13:55:04,284 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:04,284 INFO : Inserting H3K27me1K36me1 - BI10036
16 Dec 2019 13:55:05,181 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:05,182 INFO : Inserting H3K27me1K36me2 - BI10037
16 Dec 2019 13:55:06,037 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:06,037 INFO : Inserting H3K27me1K36me3 - BI10038
16 Dec 2019 13:55:06,911 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:06,911 INFO : Inserting H3K27me2K36me0 - BI10039
16 Dec 2019 13:55:07,655 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:07,656 INFO : Inserting H3K27me2K36me1 - BI10040
16 Dec 2019 13:55:08,378 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:08,379 INFO : Inserting H3K27me2K36me2 - BI10041
16 Dec 2019 13:55:09,588 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:09,589 INFO : Inserting H3K27me2K36me3 - BI10042
16 Dec 2019 13:55:10,288 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:10,288 INFO : Inserting H3K27me3K36me0 - BI10043
16 Dec 2019 13:55:11,139 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:11,139 INFO : Inserting H3K27me3K36me1 - BI10044
16 Dec 2019 13:55:12,175 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:12,175 INFO : Inserting H3K27me3K36me2 - BI10045
16 Dec 2019 13:55:13,061 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:13,061 INFO : Inserting H3K27me3K36me3 - BI10046
16 Dec 2019 13:55:14,476 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:14,476 INFO : Inserting H3K27ac1K36me0 - BI10047
16 Dec 2019 13:55:15,413 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:15,414 INFO : Inserting H3K27ac1K36me1 - BI10048
16 Dec 2019 13:55:16,310 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:16,311 INFO : Inserting H3K27ac1K36me2 - BI10049
16 Dec 2019 13:55:17,254 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:17,255 INFO : Inserting H3K27ac1K36me3 - BI10050
16 Dec 2019 13:55:18,123 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:18,123 INFO : Inserting H3.3K27me0K36me0 - BI10051
16 Dec 2019 13:55:18,886 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:18,886 INFO : Inserting H3NORM(41-49) - BI10052
16 Dec 2019 13:55:20,038 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:20,038 INFO : Inserting H3NORM(41-49) - BI10052p
16 Dec 2019 13:55:20,849 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:20,850 INFO : Inserting H3K56me0 - BI10054
16 Dec 2019 13:55:21,813 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:21,814 INFO : Inserting H3K56me1 - BI10055
16 Dec 2019 13:55:22,787 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:22,787 INFO : Inserting H3K56me2 - BI10056
16 Dec 2019 13:55:23,680 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:23,685 INFO : Inserting H3K56ac1-BI10058
16 Dec 2019 13:55:25,073 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:25,073 INFO : Inserting H3K79me0 - BI10060
16 Dec 2019 13:55:26,156 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:26,156 INFO : Inserting H3K79me1 - BI10061
16 Dec 2019 13:55:27,211 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:27,212 INFO : Inserting H3K79me2 - BI10062
16 Dec 2019 13:55:28,098 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:28,099 INFO : Inserting H4(4to17)ac0me0 - BI10088
16 Dec 2019 13:55:29,955 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:29,955 INFO : Inserting H4(4to17)K5ac1me0_leftpeak - BI10089
16 Dec 2019 13:55:31,179 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:31,179 INFO : Inserting H4(4to17)K12ac1_left peak - BI10091
16 Dec 2019 13:55:32,671 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:32,671 INFO : Inserting H4(4to17)K16ac1me0 - BI10092
16 Dec 2019 13:55:33,568 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:33,569 INFO : Inserting H4(4to17)K16ac0me1 - BI10102
16 Dec 2019 13:55:35,814 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:35,814 INFO : Inserting H4(4to17)K5ac1K8ac1me0_left peak - BI10094
16 Dec 2019 13:55:36,833 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:36,834 INFO : Inserting H4(4to17)K5ac1K16ac1me0_right peak - BI10095
16 Dec 2019 13:55:37,899 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:37,899 INFO : Inserting H4(4to17)K8ac1K12ac1me0_left peak - BI10093
16 Dec 2019 13:55:39,139 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:39,140 INFO : Inserting H4(4to17)K12ac1K16ac1me0 - BI10097
16 Dec 2019 13:55:40,438 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:40,439 INFO : Inserting H4(4to17)K8ac1K12ac1K16ac1me0_right peak - BI10098
16 Dec 2019 13:55:41,655 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:41,656 INFO : Inserting H4(4to17)K5ac1K8ac1K12ac1me0_left peak - BI10099
16 Dec 2019 13:55:43,153 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:43,154 INFO : Inserting H4(4to17)K5ac1K8ac1K16ac1me0_right peak - BI10100
16 Dec 2019 13:55:44,343 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:44,343 INFO : Inserting H4(4to17)K5ac1K8ac1K12ac1K16ac1me0 - BI10101
16 Dec 2019 13:55:46,310 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:46,310 INFO : Inserting H4(68-78)AltNorm - BI10108
16 Dec 2019 13:55:48,336 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:48,337 INFO : Inserting H4(68-78)AltNorm - BI10108p
16 Dec 2019 13:55:49,115 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:49,115 INFO : Inserting H4(20to23)K20me0 - BI10103
16 Dec 2019 13:55:50,288 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:50,289 INFO : Inserting H4(20to23)K20me1 - BI10104
16 Dec 2019 13:55:51,156 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:51,157 INFO : Inserting H4(20to23)K20me2 - BI10105
16 Dec 2019 13:55:52,345 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:52,346 INFO : Inserting H4(20to23)K20me3 - BI10106
16 Dec 2019 13:55:53,356 INFO : Total peptides inserted: 1
16 Dec 2019 13:55:53,356 INFO : Inserting H2A(21to29)NORM - BI10109
16 Dec 2019 13:55:55,450 INFO : Total peptides inserted: 1
16 Dec 2019 13:56:04,646 WARN : Log file is missing. Proceeding without the log.
16 Dec 2019 13:56:06,895 INFO : Copied LINCS_GCP_Plate72_annotated_minimized.skyd to cloud storage.
16 Dec 2019 13:56:07,049 INFO : Copied Histone2016.blib to cloud storage.
16 Dec 2019 13:56:07,201 INFO : Copied Histone2016.redundant.blib to cloud storage.
16 Dec 2019 13:56:10,852 INFO : Completed import of Skyline document from LINCS_GCP_Plate72_annotated_minimized_2019-12-16_16-53-04.sky.zip
16 Dec 2019 13:56:11,365 INFO : LINCS: Queued job Id 80532 for submitting POST request to PSP.
16 Dec 2019 13:56:11,618 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'