26 Sep 2019 13:43:44,937 INFO : Running LINCS pipeline on PSP for: LINCS_GCP_Plate59_annotated_minimized_2019-09-26_16-33-28
26 Sep 2019 13:43:44,937 INFO : =======================================
26 Sep 2019 13:43:45,928 INFO : Starting to run task 'org.labkey.lincs.psp.LincsPspTask' at location 'webserver-high-priority'
26 Sep 2019 13:43:45,928 INFO : Running LINCS PSP pipeline for LINCS_GCP_Plate59_annotated_minimized_2019-09-26_16-33-28
26 Sep 2019 13:43:45,929 INFO : Submitting job for runId: 75754, name: LINCS_GCP_Plate59_annotated_minimized_2019-09-26_16-33-28
26 Sep 2019 13:43:45,932 INFO : Looking for existing job with name LINCS_GCP_Plate59_annotated_minimized_2019-09-26_16-33-28
26 Sep 2019 13:43:46,310 INFO : PSP job name: LINCS_GCP_Plate59_annotated_minimized_2019-09-26_16-33-28
26 Sep 2019 13:43:46,311 INFO : Sending JSON:
26 Sep 2019 13:43:46,311 INFO : {
"level 4": {"panorama": {
"method": "PUT",
"url": "https://panoramaweb.org/_webdav/LINCS/GCP/%40files/GCT/LINCS_GCP_Plate59_annotated_minimized_2019-09-26_16-33-28_LVL4.gct"
}},
"assay": "GCP",
"name": "LINCS_GCP_Plate59_annotated_minimized_2019-09-26_16-33-28",
"config": {"panorama": {
"method": "PUT",
"url": "https://panoramaweb.org/_webdav/LINCS/GCP/%40files/GCT/LINCS_GCP_Plate59_annotated_minimized_2019-09-26_16-33-28.cfg"
}},
"level 2": {"panorama": {
"method": "GET",
"url": "https://panoramaweb.org/lincs/LINCS/GCP/runGCTReportApi.view?runId=75754&remote=true&reportName=GCT%20File%20GCP"
}},
"level 3": {"panorama": {
"method": "PUT",
"url": "https://panoramaweb.org/_webdav/LINCS/GCP/%40files/GCT/LINCS_GCP_Plate59_annotated_minimized_2019-09-26_16-33-28_LVL3.gct"
}}
}
26 Sep 2019 13:43:46,324 INFO : Sending POST request to https://api.clue.io/api/psp
26 Sep 2019 13:43:46,562 INFO : Response code - 200
26 Sep 2019 13:43:46,563 INFO : Response from server: {"name":"LINCS_GCP_Plate59_annotated_minimized_2019-09-26_16-33-28","assay":"GCP","status":"Waiting_To_Download","id":"5d8d2302d7148a0019926585","created":"2019-09-26T20:43:46.387Z","last_modified":"2019-09-26T20:43:46.387Z","level 2":{"panorama":{"method":"GET","url":"https://panoramaweb.org/lincs/LINCS/GCP/runGCTReportApi.view?runId=75754&remote=true&reportName=GCT%20File%20GCP"}},"level 3":{"panorama":{"method":"PUT","url":"https://panoramaweb.org/_webdav/LINCS/GCP/%40files/GCT/LINCS_GCP_Plate59_annotated_minimized_2019-09-26_16-33-28_LVL3.gct"}},"level 4":{"panorama":{"method":"PUT","url":"https://panoramaweb.org/_webdav/LINCS/GCP/%40files/GCT/LINCS_GCP_Plate59_annotated_minimized_2019-09-26_16-33-28_LVL4.gct"}},"config":{"panorama":{"method":"PUT","url":"https://panoramaweb.org/_webdav/LINCS/GCP/%40files/GCT/LINCS_GCP_Plate59_annotated_minimized_2019-09-26_16-33-28.cfg"}}}
26 Sep 2019 13:43:46,564 INFO : Sent POST request to https://api.clue.io/api/psp
26 Sep 2019 13:43:46,567 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:43:46,673 INFO : Status: Waiting_To_Download
26 Sep 2019 13:44:06,674 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:44:06,922 INFO : Status: Waiting_To_Download
26 Sep 2019 13:44:26,923 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:44:27,174 INFO : Status: Waiting_To_Download
26 Sep 2019 13:44:47,174 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:44:47,469 INFO : Status: Waiting_To_Download
26 Sep 2019 13:45:07,469 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:45:07,792 INFO : Status: Waiting_To_Download
26 Sep 2019 13:45:27,792 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:45:28,089 INFO : Status: Waiting_To_Download
26 Sep 2019 13:45:48,089 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:45:48,339 INFO : Status: Waiting_To_Download
26 Sep 2019 13:46:08,340 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:46:08,589 INFO : Status: Waiting_To_Download
26 Sep 2019 13:46:28,590 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:46:28,927 INFO : Status: Waiting_To_Download
26 Sep 2019 13:46:48,928 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:46:49,176 INFO : Status: Waiting_To_Download
26 Sep 2019 13:47:09,176 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:47:09,496 INFO : Status: Waiting_To_Download
26 Sep 2019 13:47:29,497 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:47:29,747 INFO : Status: Waiting_To_Download
26 Sep 2019 13:47:49,747 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:47:50,075 INFO : Status: Waiting_To_Download
26 Sep 2019 13:48:10,076 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:48:10,325 INFO : Status: Waiting_To_Download
26 Sep 2019 13:48:30,326 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:48:30,603 INFO : Status: Waiting_To_Download
26 Sep 2019 13:48:50,604 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:48:50,858 INFO : Status: Waiting_To_Download
26 Sep 2019 13:49:10,859 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:49:11,194 INFO : Status: Waiting_To_Download
26 Sep 2019 13:49:31,195 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:49:31,452 INFO : Status: Waiting_To_Download
26 Sep 2019 13:49:51,453 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:49:51,777 INFO : Status: Waiting_To_Download
26 Sep 2019 13:50:11,777 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:50:12,024 INFO : Status: Waiting_To_Download
26 Sep 2019 13:50:32,025 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:50:32,273 INFO : Status: Waiting_To_Download
26 Sep 2019 13:50:52,274 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:50:52,535 INFO : Status: Waiting_To_Download
26 Sep 2019 13:51:12,536 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:51:12,786 INFO : Status: Waiting_To_Download
26 Sep 2019 13:51:32,787 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:51:33,034 INFO : Status: Waiting_To_Download
26 Sep 2019 13:51:53,034 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:51:53,282 INFO : Status: Waiting_To_Download
26 Sep 2019 13:52:13,283 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:52:13,539 INFO : Status: Waiting_To_Download
26 Sep 2019 13:52:33,540 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:52:33,867 INFO : Status: Waiting_To_Download
26 Sep 2019 13:52:53,868 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:52:54,119 INFO : Status: Waiting_To_Download
26 Sep 2019 13:53:14,120 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:53:14,371 INFO : Status: Waiting_To_Download
26 Sep 2019 13:53:34,372 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:53:34,623 INFO : Status: Waiting_To_Download
26 Sep 2019 13:53:54,623 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:53:54,953 INFO : Status: Waiting_To_Download
26 Sep 2019 13:54:14,953 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:54:15,205 INFO : Status: Waiting_To_Download
26 Sep 2019 13:54:35,205 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:54:35,458 INFO : Status: Waiting_To_Download
26 Sep 2019 13:54:55,459 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:54:55,710 INFO : Status: Waiting_To_Download
26 Sep 2019 13:55:15,711 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:55:16,038 INFO : Status: Waiting_To_Download
26 Sep 2019 13:55:36,039 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:55:36,291 INFO : Status: Waiting_To_Download
26 Sep 2019 13:55:56,292 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:55:56,539 INFO : Status: Waiting_To_Download
26 Sep 2019 13:56:16,540 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:56:16,792 INFO : Status: Waiting_To_Download
26 Sep 2019 13:56:36,792 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:56:37,119 INFO : Status: Waiting_To_Download
26 Sep 2019 13:56:57,120 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:56:57,724 INFO : Status: Waiting_To_Download
26 Sep 2019 13:57:17,724 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:57:17,970 INFO : Status: Waiting_To_Download
26 Sep 2019 13:57:37,971 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:57:38,221 INFO : Status: Waiting_To_Download
26 Sep 2019 13:57:58,222 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:57:58,475 INFO : Status: Waiting_To_Download
26 Sep 2019 13:58:18,476 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:58:18,724 INFO : Status: Waiting_To_Download
26 Sep 2019 13:58:38,724 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:58:39,047 INFO : Status: Waiting_To_Download
26 Sep 2019 13:58:59,048 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:58:59,296 INFO : Status: Waiting_To_Download
26 Sep 2019 13:59:19,297 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:59:19,546 INFO : Status: Waiting_To_Download
26 Sep 2019 13:59:39,546 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 13:59:39,796 INFO : Status: Waiting_To_Download
26 Sep 2019 13:59:59,796 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 14:00:00,115 INFO : Status: Waiting_To_Download
26 Sep 2019 14:00:20,115 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 14:00:20,362 INFO : Status: Waiting_To_Download
26 Sep 2019 14:00:40,362 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 14:00:40,613 INFO : Status: Waiting_To_Download
26 Sep 2019 14:01:00,613 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 14:01:00,864 INFO : Status: Waiting_To_Download
26 Sep 2019 14:01:20,864 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 14:01:21,191 INFO : Status: Waiting_To_Download
26 Sep 2019 14:01:41,192 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 14:01:41,442 INFO : Status: Waiting_To_Download
26 Sep 2019 14:02:01,443 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 14:02:01,769 INFO : Status: Waiting_To_Download
26 Sep 2019 14:02:21,769 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 14:02:22,015 INFO : Status: Waiting_To_Download
26 Sep 2019 14:02:42,015 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 14:02:42,273 INFO : Status: Waiting_To_Download
26 Sep 2019 14:03:02,273 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 14:03:02,524 INFO : Status: Waiting_To_Download
26 Sep 2019 14:03:22,525 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 14:03:22,926 INFO : Status: Waiting_To_Download
26 Sep 2019 14:03:42,926 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 14:03:43,174 INFO : Status: Waiting_To_Download
26 Sep 2019 14:04:03,175 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 14:04:03,433 INFO : Status: Waiting_To_Download
26 Sep 2019 14:04:23,434 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 14:04:23,684 INFO : Status: Waiting_To_Download
26 Sep 2019 14:04:43,685 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 14:04:44,004 INFO : Status: Waiting_To_Download
26 Sep 2019 14:05:04,004 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 14:05:04,259 INFO : Status: Waiting_To_Download
26 Sep 2019 14:05:24,259 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 14:05:24,514 INFO : Status: Waiting_To_Download
26 Sep 2019 14:05:44,515 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 14:05:44,766 INFO : Status: Waiting_To_Download
26 Sep 2019 14:06:04,767 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 14:06:05,090 INFO : Status: Waiting_To_Download
26 Sep 2019 14:06:25,091 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 14:06:25,341 INFO : Status: Waiting_To_Download
26 Sep 2019 14:06:45,341 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 14:06:45,666 INFO : Status: Waiting_To_Download
26 Sep 2019 14:07:05,667 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 14:07:05,920 INFO : Status: Waiting_To_Download
26 Sep 2019 14:07:25,921 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 14:07:26,168 INFO : Status: Waiting_To_Download
26 Sep 2019 14:07:46,169 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 14:07:46,421 INFO : Status: Waiting_To_Download
26 Sep 2019 14:08:06,421 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 14:08:06,747 INFO : Status: Waiting_To_Download
26 Sep 2019 14:08:26,747 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 14:08:26,997 INFO : Status: Waiting_To_Download
26 Sep 2019 14:08:46,998 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 14:08:47,246 INFO : Status: Waiting_To_Download
26 Sep 2019 14:09:07,247 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 14:09:07,494 INFO : Status: Waiting_To_Download
26 Sep 2019 14:09:27,495 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 14:09:27,819 INFO : Status: Waiting_To_Download
26 Sep 2019 14:09:47,820 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 14:09:48,067 INFO : Status: Waiting_To_Download
26 Sep 2019 14:10:08,067 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 14:10:08,318 INFO : Status: Waiting_To_Download
26 Sep 2019 14:10:28,319 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 14:10:28,565 INFO : Status: Waiting_To_Download
26 Sep 2019 14:10:48,566 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 14:10:48,891 INFO : Status: Waiting_To_Download
26 Sep 2019 14:11:08,892 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 14:11:09,140 INFO : Status: Waiting_To_Download
26 Sep 2019 14:11:29,141 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 14:11:29,391 INFO : Status: Waiting_To_Download
26 Sep 2019 14:11:49,391 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 14:11:49,641 INFO : Status: Waiting_To_Download
26 Sep 2019 14:12:09,641 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 14:12:09,964 INFO : Status: Waiting_To_Download
26 Sep 2019 14:12:29,964 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 14:12:30,215 INFO : Status: Waiting_To_Download
26 Sep 2019 14:12:50,216 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 14:12:50,463 INFO : Status: Waiting_To_Download
26 Sep 2019 14:13:10,463 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 14:13:10,711 INFO : Status: Waiting_To_Download
26 Sep 2019 14:13:30,712 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 14:13:30,995 INFO : Status: Waiting_To_Download
26 Sep 2019 14:13:50,996 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 14:13:51,244 INFO : Status: Waiting_To_Download
26 Sep 2019 14:14:11,245 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 14:14:11,574 INFO : Status: Waiting_To_Download
26 Sep 2019 14:14:31,575 INFO : Checking status of job 5d8d2302d7148a0019926585
26 Sep 2019 14:14:31,819 INFO : Status: Waiting_To_Download
26 Sep 2019 14:14:31,820 ERROR: Exceeded 30 minute wait time.
26 Sep 2019 14:14:32,710 INFO : Finished running LINCS PSP pipeline.
26 Sep 2019 14:14:32,710 INFO : Successfully completed task 'org.labkey.lincs.psp.LincsPspTask'