Skyline document import - LINCS_GCP_Plate81_annotated_minimized_2019-09-11_09-07-54.sky.zip

GCP

Job Status

Created: 2019-09-11 06:09:26
Modified: 2020-06-01 16:36:20
Email: jmulla@broadinstitute.org
Status: COMPLETE
Info:
Description: Skyline document import - LINCS_GCP_Plate81_annotated_minimized_2019-09-11_09-07-54.sky.zip
File Path: /data/labkey/files/LINCS/GCP/@files/LINCS_GCP_Plate81_annotated_minimized_2019-09-11_09-07-54.sky_2019-09-11_06-09-25.log
Files: LINCS_GCP_Plate81_annotated_minimized_2019-09-11_09-07-54.sky_2019-09-11_06-09-25.log
Completed Runs: LINCS_GCP_Plate81_annotated_minimized_2019-09-11_09-07-54.sky.zip

Log File


11 Sep 2019 06:09:26,473 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
11 Sep 2019 06:09:32,478 INFO : Created temp file because input is from cloud: s3://s3.amazonaws.com/mc-panoramaweb/container836/LINCS_GCP_Plate81_annotated_minimized_2019-09-11_09-07-54.sky.zip
11 Sep 2019 06:09:32,481 INFO : Starting to import Skyline document from LINCS_GCP_Plate81_annotated_minimized_2019-09-11_09-07-54.sky.zip
11 Sep 2019 06:09:32,482 INFO : Expanding Histone2016.blib
11 Sep 2019 06:09:32,487 INFO : Expanding Histone2016.redundant.blib
11 Sep 2019 06:09:32,491 INFO : Expanding LINCS_GCP_Plate81_annotated_minimized.skyd
11 Sep 2019 06:09:33,752 INFO : Expanding LINCS_GCP_Plate81_annotated_minimized.sky.view
11 Sep 2019 06:09:33,752 INFO : Expanding LINCS_GCP_Plate81_annotated_minimized.sky
11 Sep 2019 06:09:33,892 WARN : The version of this Skyline document is 19.11. This is newer than the highest supported version 4.1
11 Sep 2019 06:09:38,244 INFO : Inserting H3K4me0 - BI10003
11 Sep 2019 06:09:40,298 INFO : Total peptides inserted: 1
11 Sep 2019 06:09:40,299 INFO : Inserting H3K4me1 - BI10004
11 Sep 2019 06:09:41,301 INFO : Total peptides inserted: 1
11 Sep 2019 06:09:41,301 INFO : Inserting H3K4me2 - BI10005
11 Sep 2019 06:09:43,542 INFO : Total peptides inserted: 1
11 Sep 2019 06:09:43,542 INFO : Inserting H3K4me3 - BI10006
11 Sep 2019 06:09:45,592 INFO : Total peptides inserted: 1
11 Sep 2019 06:09:45,593 INFO : Inserting H3K4ac1 - BI10007
11 Sep 2019 06:09:46,506 INFO : Total peptides inserted: 1
11 Sep 2019 06:09:46,507 INFO : Inserting H3K9me0K14ac0 - BI10008
11 Sep 2019 06:09:47,651 INFO : Total peptides inserted: 1
11 Sep 2019 06:09:47,652 INFO : Inserting H3K9me1K14ac0 - BI10009
11 Sep 2019 06:09:48,706 INFO : Total peptides inserted: 1
11 Sep 2019 06:09:48,707 INFO : Inserting H3K9me2K14ac0 - BI10010
11 Sep 2019 06:09:49,961 INFO : Total peptides inserted: 1
11 Sep 2019 06:09:49,961 INFO : Inserting H3K9me3K14ac0 - BI10011
11 Sep 2019 06:09:51,574 INFO : Total peptides inserted: 1
11 Sep 2019 06:09:51,575 INFO : Inserting H3K9ac1K14ac0 - BI10012
11 Sep 2019 06:09:52,601 INFO : Total peptides inserted: 1
11 Sep 2019 06:09:52,601 INFO : Inserting H3K9me0K14ac1 - BI10013
11 Sep 2019 06:09:53,762 INFO : Total peptides inserted: 1
11 Sep 2019 06:09:53,763 INFO : Inserting H3K9me1K14ac1 - BI10014
11 Sep 2019 06:09:54,785 INFO : Total peptides inserted: 1
11 Sep 2019 06:09:54,786 INFO : Inserting H3K9me2K14ac1 - BI10015
11 Sep 2019 06:09:55,980 INFO : Total peptides inserted: 1
11 Sep 2019 06:09:55,980 INFO : Inserting H3K9me3K14ac1 - BI10016
11 Sep 2019 06:09:57,060 INFO : Total peptides inserted: 1
11 Sep 2019 06:09:57,060 INFO : Inserting H3K9ac1K14ac1 - BI10017
11 Sep 2019 06:09:58,413 INFO : Total peptides inserted: 1
11 Sep 2019 06:09:58,413 INFO : Inserting H3K9me0S10ph1K14ac0 - BI10018
11 Sep 2019 06:09:59,190 INFO : Total peptides inserted: 1
11 Sep 2019 06:09:59,190 INFO : Inserting H3K9me1S10ph1K14ac0 - BI10019
11 Sep 2019 06:09:59,972 INFO : Total peptides inserted: 1
11 Sep 2019 06:09:59,972 INFO : Inserting H3K9me2S10ph1K14ac0 - BI10020
11 Sep 2019 06:10:01,236 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:01,237 INFO : Inserting H3K9me3S10ph1K14ac0 - BI10021
11 Sep 2019 06:10:02,283 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:02,284 INFO : Inserting H3K9ac1S10ph1K14ac0 - BI10022
11 Sep 2019 06:10:03,100 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:03,101 INFO : Inserting H3K9me0S10ph1K14ac1 - BI10023
11 Sep 2019 06:10:03,919 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:03,920 INFO : Inserting H3K9me1S10ph1K14ac1 - BI10024
11 Sep 2019 06:10:04,873 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:04,874 INFO : Inserting H3K9me2S10ph1K14ac1 - BI10025
11 Sep 2019 06:10:05,694 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:05,694 INFO : Inserting H3K9me3S10ph1K14ac1 - BI10026
11 Sep 2019 06:10:06,915 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:06,916 INFO : Inserting H3K9ac1S10ph1K14ac1 - BI10027
11 Sep 2019 06:10:07,632 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:07,633 INFO : Inserting H3K18ac0K23ac0 - BI10028
11 Sep 2019 06:10:09,524 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:09,524 INFO : Inserting H3K18ac1K23ac0 - BI10029
11 Sep 2019 06:10:10,544 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:10,544 INFO : Inserting H3K18ac0K23ac1 - BI10030
11 Sep 2019 06:10:11,433 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:11,434 INFO : Inserting H3K18ac1K23ac1 - BI10031
11 Sep 2019 06:10:12,291 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:12,292 INFO : Inserting H3K18ub1K23ac0 - BI10032
11 Sep 2019 06:10:13,417 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:13,418 INFO : Inserting H3K18ac0K23ub1 - BI10033
11 Sep 2019 06:10:14,184 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:14,185 INFO : Inserting H3K27me0K36me0 - BI10034
11 Sep 2019 06:10:15,518 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:15,518 INFO : Inserting H3K27me0K36me1 - BI10085
11 Sep 2019 06:10:17,365 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:17,365 INFO : Inserting H3K27me0K36me2 - BI10086
11 Sep 2019 06:10:18,354 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:18,354 INFO : Inserting H3K27me0K36me3 - BI10087
11 Sep 2019 06:10:19,617 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:19,618 INFO : Inserting H3K27me1K36me0 - BI10035
11 Sep 2019 06:10:21,171 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:21,172 INFO : Inserting H3K27me1K36me1 - BI10036
11 Sep 2019 06:10:22,106 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:22,106 INFO : Inserting H3K27me1K36me2 - BI10037
11 Sep 2019 06:10:22,914 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:22,914 INFO : Inserting H3K27me1K36me3 - BI10038
11 Sep 2019 06:10:23,913 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:23,914 INFO : Inserting H3K27me2K36me0 - BI10039
11 Sep 2019 06:10:24,792 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:24,793 INFO : Inserting H3K27me2K36me1 - BI10040
11 Sep 2019 06:10:25,582 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:25,582 INFO : Inserting H3K27me2K36me2 - BI10041
11 Sep 2019 06:10:26,869 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:26,870 INFO : Inserting H3K27me2K36me3 - BI10042
11 Sep 2019 06:10:28,678 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:28,678 INFO : Inserting H3K27me3K36me0 - BI10043
11 Sep 2019 06:10:29,476 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:29,477 INFO : Inserting H3K27me3K36me1 - BI10044
11 Sep 2019 06:10:30,888 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:30,888 INFO : Inserting H3K27me3K36me2 - BI10045
11 Sep 2019 06:10:31,807 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:31,807 INFO : Inserting H3K27me3K36me3 - BI10046
11 Sep 2019 06:10:33,395 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:33,396 INFO : Inserting H3K27ac1K36me0 - BI10047
11 Sep 2019 06:10:34,362 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:34,362 INFO : Inserting H3K27ac1K36me1 - BI10048
11 Sep 2019 06:10:35,329 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:35,329 INFO : Inserting H3K27ac1K36me2 - BI10049
11 Sep 2019 06:10:36,253 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:36,253 INFO : Inserting H3K27ac1K36me3 - BI10050
11 Sep 2019 06:10:37,219 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:37,220 INFO : Inserting H3.3K27me0K36me0 - BI10051
11 Sep 2019 06:10:38,148 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:38,149 INFO : Inserting H3NORM(41-49) - BI10052
11 Sep 2019 06:10:39,431 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:39,432 INFO : Inserting H3NORM(41-49) - BI10052p
11 Sep 2019 06:10:40,226 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:40,226 INFO : Inserting H3K56me0 - BI10054
11 Sep 2019 06:10:41,214 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:41,215 INFO : Inserting H3K56me1 - BI10055
11 Sep 2019 06:10:42,188 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:42,189 INFO : Inserting H3K56me2 - BI10056
11 Sep 2019 06:10:43,537 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:43,699 INFO : Inserting H3K56ac1-BI10058
11 Sep 2019 06:10:46,408 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:46,409 INFO : Inserting H3K79me0 - BI10060
11 Sep 2019 06:10:47,595 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:47,595 INFO : Inserting H3K79me1 - BI10061
11 Sep 2019 06:10:48,856 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:48,857 INFO : Inserting H3K79me2 - BI10062
11 Sep 2019 06:10:49,952 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:49,952 INFO : Inserting H4(4to17)ac0me0 - BI10088
11 Sep 2019 06:10:52,141 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:52,141 INFO : Inserting H4(4to17)K5ac1me0_leftpeak - BI10089
11 Sep 2019 06:10:53,533 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:53,533 INFO : Inserting H4(4to17)K12ac1_left peak - BI10091
11 Sep 2019 06:10:55,119 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:55,120 INFO : Inserting H4(4to17)K16ac1me0 - BI10092
11 Sep 2019 06:10:56,117 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:56,117 INFO : Inserting H4(4to17)K16ac0me1 - BI10102
11 Sep 2019 06:10:58,619 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:58,620 INFO : Inserting H4(4to17)K5ac1K8ac1me0_left peak - BI10094
11 Sep 2019 06:10:59,910 INFO : Total peptides inserted: 1
11 Sep 2019 06:10:59,911 INFO : Inserting H4(4to17)K5ac1K16ac1me0_right peak - BI10095
11 Sep 2019 06:11:01,145 INFO : Total peptides inserted: 1
11 Sep 2019 06:11:01,145 INFO : Inserting H4(4to17)K8ac1K12ac1me0_left peak - BI10093
11 Sep 2019 06:11:02,422 INFO : Total peptides inserted: 1
11 Sep 2019 06:11:02,423 INFO : Inserting H4(4to17)K12ac1K16ac1me0 - BI10097
11 Sep 2019 06:11:04,020 INFO : Total peptides inserted: 1
11 Sep 2019 06:11:04,021 INFO : Inserting H4(4to17)K8ac1K12ac1K16ac1me0_right peak - BI10098
11 Sep 2019 06:11:05,508 INFO : Total peptides inserted: 1
11 Sep 2019 06:11:05,508 INFO : Inserting H4(4to17)K5ac1K8ac1K12ac1me0_left peak - BI10099
11 Sep 2019 06:11:09,296 INFO : Total peptides inserted: 1
11 Sep 2019 06:11:09,296 INFO : Inserting H4(4to17)K5ac1K8ac1K16ac1me0_right peak - BI10100
11 Sep 2019 06:11:10,910 INFO : Total peptides inserted: 1
11 Sep 2019 06:11:10,911 INFO : Inserting H4(4to17)K5ac1K8ac1K12ac1K16ac1me0 - BI10101
11 Sep 2019 06:11:13,295 INFO : Total peptides inserted: 1
11 Sep 2019 06:11:13,296 INFO : Inserting H4(68-78)AltNorm - BI10108
11 Sep 2019 06:11:15,734 INFO : Total peptides inserted: 1
11 Sep 2019 06:11:15,735 INFO : Inserting H4(68-78)AltNorm - BI10108p
11 Sep 2019 06:11:16,631 INFO : Total peptides inserted: 1
11 Sep 2019 06:11:16,631 INFO : Inserting H4(20to23)K20me0 - BI10103
11 Sep 2019 06:11:17,956 INFO : Total peptides inserted: 1
11 Sep 2019 06:11:17,957 INFO : Inserting H4(20to23)K20me1 - BI10104
11 Sep 2019 06:11:19,064 INFO : Total peptides inserted: 1
11 Sep 2019 06:11:19,065 INFO : Inserting H4(20to23)K20me2 - BI10105
11 Sep 2019 06:11:20,325 INFO : Total peptides inserted: 1
11 Sep 2019 06:11:20,326 INFO : Inserting H4(20to23)K20me3 - BI10106
11 Sep 2019 06:11:21,513 INFO : Total peptides inserted: 1
11 Sep 2019 06:11:21,513 INFO : Inserting H2A(21to29)NORM - BI10109
11 Sep 2019 06:11:23,541 INFO : Total peptides inserted: 1
11 Sep 2019 06:11:33,500 WARN : Log file is missing. Proceeding without the log.
11 Sep 2019 06:11:36,429 INFO : Copied LINCS_GCP_Plate81_annotated_minimized.skyd to cloud storage.
11 Sep 2019 06:11:36,579 INFO : Copied Histone2016.blib to cloud storage.
11 Sep 2019 06:11:36,829 INFO : Copied Histone2016.redundant.blib to cloud storage.
11 Sep 2019 06:11:38,614 INFO : Completed import of Skyline document from LINCS_GCP_Plate81_annotated_minimized_2019-09-11_09-07-54.sky.zip
11 Sep 2019 06:11:39,699 INFO : LINCS: Queued job Id 74755 for submitting POST request to PSP.
11 Sep 2019 06:11:39,966 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'