Skyline document import - LINCS_GCP_Plate78_annotated_minimized_2019-08-14_12-00-49.sky.zip

GCP

Job Status

Created: 2019-08-14 09:03:45
Modified: 2020-06-01 16:36:20
Email: karen@broadinstitute.org
Status: COMPLETE
Info:
Description: Skyline document import - LINCS_GCP_Plate78_annotated_minimized_2019-08-14_12-00-49.sky.zip
File Path: /data/labkey/files/LINCS/GCP/@files/LINCS_GCP_Plate78_annotated_minimized_2019-08-14_12-00-49.sky_2019-08-14_09-03-45.log
Files: LINCS_GCP_Plate78_annotated_minimized_2019-08-14_12-00-49.sky_2019-08-14_09-03-45.log
Completed Runs: LINCS_GCP_Plate78_annotated_minimized_2019-08-14_12-00-49.sky.zip

Log File


14 Aug 2019 09:03:45,891 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
14 Aug 2019 09:03:49,825 INFO : Created temp file because input is from cloud: s3://s3.amazonaws.com/mc-panoramaweb/container836/LINCS_GCP_Plate78_annotated_minimized_2019-08-14_12-00-49.sky.zip
14 Aug 2019 09:03:49,828 INFO : Starting to import Skyline document from LINCS_GCP_Plate78_annotated_minimized_2019-08-14_12-00-49.sky.zip
14 Aug 2019 09:03:49,829 INFO : Expanding LINCS_GCP_Plate78_annotated_minimized.skyd
14 Aug 2019 09:03:50,739 INFO : Expanding LINCS_GCP_Plate78_annotated_minimized.sky.view
14 Aug 2019 09:03:50,739 INFO : Expanding LINCS_GCP_Plate78_annotated_minimized.sky
14 Aug 2019 09:03:50,884 WARN : The version of this Skyline document is 19.1. This is newer than the highest supported version 4.1
14 Aug 2019 09:03:55,197 INFO : Inserting H3K4me0 - BI10003
14 Aug 2019 09:03:57,629 INFO : Total peptides inserted: 1
14 Aug 2019 09:03:57,629 INFO : Inserting H3K4me1 - BI10004
14 Aug 2019 09:03:58,764 INFO : Total peptides inserted: 1
14 Aug 2019 09:03:58,765 INFO : Inserting H3K4me2 - BI10005
14 Aug 2019 09:04:00,421 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:00,422 INFO : Inserting H3K4me3 - BI10006
14 Aug 2019 09:04:02,589 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:02,590 INFO : Inserting H3K4ac1 - BI10007
14 Aug 2019 09:04:03,654 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:03,654 INFO : Inserting H3K9me0K14ac0 - BI10008
14 Aug 2019 09:04:04,797 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:04,798 INFO : Inserting H3K9me1K14ac0 - BI10009
14 Aug 2019 09:04:05,912 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:05,912 INFO : Inserting H3K9me2K14ac0 - BI10010
14 Aug 2019 09:04:07,044 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:07,045 INFO : Inserting H3K9me3K14ac0 - BI10011
14 Aug 2019 09:04:08,149 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:08,149 INFO : Inserting H3K9ac1K14ac0 - BI10012
14 Aug 2019 09:04:09,125 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:09,125 INFO : Inserting H3K9me0K14ac1 - BI10013
14 Aug 2019 09:04:10,226 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:10,226 INFO : Inserting H3K9me1K14ac1 - BI10014
14 Aug 2019 09:04:11,262 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:11,262 INFO : Inserting H3K9me2K14ac1 - BI10015
14 Aug 2019 09:04:12,369 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:12,369 INFO : Inserting H3K9me3K14ac1 - BI10016
14 Aug 2019 09:04:13,326 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:13,327 INFO : Inserting H3K9ac1K14ac1 - BI10017
14 Aug 2019 09:04:14,371 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:14,371 INFO : Inserting H3K9me0S10ph1K14ac0 - BI10018
14 Aug 2019 09:04:15,184 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:15,184 INFO : Inserting H3K9me1S10ph1K14ac0 - BI10019
14 Aug 2019 09:04:15,981 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:15,981 INFO : Inserting H3K9me2S10ph1K14ac0 - BI10020
14 Aug 2019 09:04:17,133 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:17,134 INFO : Inserting H3K9me3S10ph1K14ac0 - BI10021
14 Aug 2019 09:04:18,256 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:18,257 INFO : Inserting H3K9ac1S10ph1K14ac0 - BI10022
14 Aug 2019 09:04:19,322 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:19,322 INFO : Inserting H3K9me0S10ph1K14ac1 - BI10023
14 Aug 2019 09:04:20,197 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:20,197 INFO : Inserting H3K9me1S10ph1K14ac1 - BI10024
14 Aug 2019 09:04:21,274 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:21,274 INFO : Inserting H3K9me2S10ph1K14ac1 - BI10025
14 Aug 2019 09:04:22,237 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:22,237 INFO : Inserting H3K9me3S10ph1K14ac1 - BI10026
14 Aug 2019 09:04:23,449 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:23,449 INFO : Inserting H3K9ac1S10ph1K14ac1 - BI10027
14 Aug 2019 09:04:24,238 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:24,239 INFO : Inserting H3K18ac0K23ac0 - BI10028
14 Aug 2019 09:04:25,080 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:25,080 INFO : Inserting H3K18ac1K23ac0 - BI10029
14 Aug 2019 09:04:25,903 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:25,904 INFO : Inserting H3K18ac0K23ac1 - BI10030
14 Aug 2019 09:04:26,739 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:26,739 INFO : Inserting H3K18ac1K23ac1 - BI10031
14 Aug 2019 09:04:27,506 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:27,507 INFO : Inserting H3K18ub1K23ac0 - BI10032
14 Aug 2019 09:04:28,622 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:28,622 INFO : Inserting H3K18ac0K23ub1 - BI10033
14 Aug 2019 09:04:29,451 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:29,451 INFO : Inserting H3K27me0K36me0 - BI10034
14 Aug 2019 09:04:30,699 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:30,699 INFO : Inserting H3K27me0K36me1 - BI10085
14 Aug 2019 09:04:32,156 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:32,156 INFO : Inserting H3K27me0K36me2 - BI10086
14 Aug 2019 09:04:33,114 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:33,115 INFO : Inserting H3K27me0K36me3 - BI10087
14 Aug 2019 09:04:34,041 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:34,042 INFO : Inserting H3K27me1K36me0 - BI10035
14 Aug 2019 09:04:35,466 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:35,466 INFO : Inserting H3K27me1K36me1 - BI10036
14 Aug 2019 09:04:36,424 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:36,424 INFO : Inserting H3K27me1K36me2 - BI10037
14 Aug 2019 09:04:37,423 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:37,423 INFO : Inserting H3K27me1K36me3 - BI10038
14 Aug 2019 09:04:38,363 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:38,363 INFO : Inserting H3K27me2K36me0 - BI10039
14 Aug 2019 09:04:39,153 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:39,153 INFO : Inserting H3K27me2K36me1 - BI10040
14 Aug 2019 09:04:39,990 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:39,990 INFO : Inserting H3K27me2K36me2 - BI10041
14 Aug 2019 09:04:41,383 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:41,383 INFO : Inserting H3K27me2K36me3 - BI10042
14 Aug 2019 09:04:43,177 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:43,177 INFO : Inserting H3K27me3K36me0 - BI10043
14 Aug 2019 09:04:44,019 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:44,020 INFO : Inserting H3K27me3K36me1 - BI10044
14 Aug 2019 09:04:45,177 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:45,178 INFO : Inserting H3K27me3K36me2 - BI10045
14 Aug 2019 09:04:46,169 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:46,169 INFO : Inserting H3K27me3K36me3 - BI10046
14 Aug 2019 09:04:47,706 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:47,706 INFO : Inserting H3K27ac1K36me0 - BI10047
14 Aug 2019 09:04:48,691 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:48,692 INFO : Inserting H3K27ac1K36me1 - BI10048
14 Aug 2019 09:04:49,649 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:49,650 INFO : Inserting H3K27ac1K36me2 - BI10049
14 Aug 2019 09:04:50,675 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:50,675 INFO : Inserting H3K27ac1K36me3 - BI10050
14 Aug 2019 09:04:51,634 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:51,635 INFO : Inserting H3.3K27me0K36me0 - BI10051
14 Aug 2019 09:04:52,515 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:52,515 INFO : Inserting H3NORM(41-49) - BI10052
14 Aug 2019 09:04:53,788 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:53,788 INFO : Inserting H3NORM(41-49) - BI10052p
14 Aug 2019 09:04:54,668 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:54,668 INFO : Inserting H3K56me0 - BI10054
14 Aug 2019 09:04:55,791 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:55,792 INFO : Inserting H3K56me1 - BI10055
14 Aug 2019 09:04:56,889 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:56,890 INFO : Inserting H3K56me2 - BI10056
14 Aug 2019 09:04:57,776 INFO : Total peptides inserted: 1
14 Aug 2019 09:04:57,953 INFO : Inserting H3K56ac1-BI10058
14 Aug 2019 09:05:00,097 INFO : Total peptides inserted: 1
14 Aug 2019 09:05:00,098 INFO : Inserting H3K79me0 - BI10060
14 Aug 2019 09:05:01,320 INFO : Total peptides inserted: 1
14 Aug 2019 09:05:01,321 INFO : Inserting H3K79me1 - BI10061
14 Aug 2019 09:05:02,656 INFO : Total peptides inserted: 1
14 Aug 2019 09:05:02,656 INFO : Inserting H3K79me2 - BI10062
14 Aug 2019 09:05:03,641 INFO : Total peptides inserted: 1
14 Aug 2019 09:05:03,641 INFO : Inserting H4(4to17)ac0me0 - BI10088
14 Aug 2019 09:05:05,690 INFO : Total peptides inserted: 1
14 Aug 2019 09:05:05,691 INFO : Inserting H4(4to17)K5ac1me0_leftpeak - BI10089
14 Aug 2019 09:05:06,948 INFO : Total peptides inserted: 1
14 Aug 2019 09:05:06,948 INFO : Inserting H4(4to17)K12ac1_left peak - BI10091
14 Aug 2019 09:05:08,650 INFO : Total peptides inserted: 1
14 Aug 2019 09:05:08,650 INFO : Inserting H4(4to17)K16ac1me0 - BI10092
14 Aug 2019 09:05:09,647 INFO : Total peptides inserted: 1
14 Aug 2019 09:05:09,647 INFO : Inserting H4(4to17)K16ac0me1 - BI10102
14 Aug 2019 09:05:12,238 INFO : Total peptides inserted: 1
14 Aug 2019 09:05:12,239 INFO : Inserting H4(4to17)K5ac1K8ac1me0_left peak - BI10094
14 Aug 2019 09:05:13,609 INFO : Total peptides inserted: 1
14 Aug 2019 09:05:13,610 INFO : Inserting H4(4to17)K5ac1K16ac1me0_right peak - BI10095
14 Aug 2019 09:05:14,624 INFO : Total peptides inserted: 1
14 Aug 2019 09:05:14,624 INFO : Inserting H4(4to17)K8ac1K12ac1me0_left peak - BI10093
14 Aug 2019 09:05:16,052 INFO : Total peptides inserted: 1
14 Aug 2019 09:05:16,053 INFO : Inserting H4(4to17)K12ac1K16ac1me0 - BI10097
14 Aug 2019 09:05:17,732 INFO : Total peptides inserted: 1
14 Aug 2019 09:05:17,732 INFO : Inserting H4(4to17)K8ac1K12ac1K16ac1me0_right peak - BI10098
14 Aug 2019 09:05:18,962 INFO : Total peptides inserted: 1
14 Aug 2019 09:05:18,962 INFO : Inserting H4(4to17)K5ac1K8ac1K12ac1me0_left peak - BI10099
14 Aug 2019 09:05:22,049 INFO : Total peptides inserted: 1
14 Aug 2019 09:05:22,052 INFO : Inserting H4(4to17)K5ac1K8ac1K16ac1me0_right peak - BI10100
14 Aug 2019 09:05:23,559 INFO : Total peptides inserted: 1
14 Aug 2019 09:05:23,559 INFO : Inserting H4(4to17)K5ac1K8ac1K12ac1K16ac1me0 - BI10101
14 Aug 2019 09:05:26,414 INFO : Total peptides inserted: 1
14 Aug 2019 09:05:26,414 INFO : Inserting H4(68-78)AltNorm - BI10108
14 Aug 2019 09:05:28,962 INFO : Total peptides inserted: 1
14 Aug 2019 09:05:28,962 INFO : Inserting H4(68-78)AltNorm - BI10108p
14 Aug 2019 09:05:29,898 INFO : Total peptides inserted: 1
14 Aug 2019 09:05:29,898 INFO : Inserting H4(20to23)K20me0 - BI10103
14 Aug 2019 09:05:31,317 INFO : Total peptides inserted: 1
14 Aug 2019 09:05:31,317 INFO : Inserting H4(20to23)K20me1 - BI10104
14 Aug 2019 09:05:32,418 INFO : Total peptides inserted: 1
14 Aug 2019 09:05:32,419 INFO : Inserting H4(20to23)K20me2 - BI10105
14 Aug 2019 09:05:33,667 INFO : Total peptides inserted: 1
14 Aug 2019 09:05:33,667 INFO : Inserting H4(20to23)K20me3 - BI10106
14 Aug 2019 09:05:34,775 INFO : Total peptides inserted: 1
14 Aug 2019 09:05:34,775 INFO : Inserting H2A(21to29)NORM - BI10109
14 Aug 2019 09:05:36,645 INFO : Total peptides inserted: 1
14 Aug 2019 09:05:46,513 WARN : Log file is missing. Proceeding without the log.
14 Aug 2019 09:05:49,545 INFO : Copied LINCS_GCP_Plate78_annotated_minimized.skyd to cloud storage.
14 Aug 2019 09:05:51,920 INFO : Completed import of Skyline document from LINCS_GCP_Plate78_annotated_minimized_2019-08-14_12-00-49.sky.zip
14 Aug 2019 09:05:52,635 INFO : LINCS: Queued job Id 73262 for submitting POST request to PSP.
14 Aug 2019 09:05:53,539 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'