Skyline document import - LINCS_GCP_Plate96_annotated_minimized_2021-02-02_13-46-59.sky.zip

GCP

Job Status

Created: 2021-02-02 10:49:23
Modified: 2021-02-02 10:51:36
Email: karen@broadinstitute.org
Status: COMPLETE
Info:
Description: Skyline document import - LINCS_GCP_Plate96_annotated_minimized_2021-02-02_13-46-59.sky.zip
File Path: /data/labkey/files/LINCS/GCP/@files/LINCS_GCP_Plate96_annotated_minimized_2021-02-02_13-46-59.sky_2021-02-02_10-49-22.log
Files: LINCS_GCP_Plate96_annotated_minimized_2021-02-02_13-46-59.sky_2021-02-02_10-49-22.log
Completed Runs: LINCS_GCP_Plate96_annotated_minimized_2021-02-02_13-46-59.sky.zip

Log File


02 Feb 2021 10:49:23,244 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
02 Feb 2021 10:49:23,262 INFO : Starting to import Skyline document from LINCS_GCP_Plate96_annotated_minimized_2021-02-02_13-46-59.sky.zip
02 Feb 2021 10:49:23,295 INFO : Expanding Histone2016.blib
02 Feb 2021 10:49:23,338 INFO : Expanding Histone2016.redundant.blib
02 Feb 2021 10:49:23,377 INFO : Expanding LINCS_GCP_Plate96_annotated_minimized.skyd
02 Feb 2021 10:49:25,203 INFO : Expanding LINCS_GCP_Plate96_annotated_minimized.sky.view
02 Feb 2021 10:49:25,218 INFO : Expanding LINCS_GCP_Plate96_annotated_minimized.sky
02 Feb 2021 10:49:25,857 INFO : 1% Done
02 Feb 2021 10:49:30,275 INFO : Inserting H3K4me0 - BI10003
02 Feb 2021 10:49:30,352 INFO : 2% Done
02 Feb 2021 10:49:31,991 INFO : Inserting H3K4me1 - BI10004
02 Feb 2021 10:49:33,045 INFO : Inserting H3K4me2 - BI10005
02 Feb 2021 10:49:33,078 INFO : 3% Done
02 Feb 2021 10:49:34,769 INFO : Inserting H3K4me3 - BI10006
02 Feb 2021 10:49:34,815 INFO : 5% Done
02 Feb 2021 10:49:36,847 INFO : Inserting H3K4ac1 - BI10007
02 Feb 2021 10:49:36,890 INFO : 6% Done
02 Feb 2021 10:49:37,758 INFO : Inserting H3K9me0K14ac0 - BI10008
02 Feb 2021 10:49:39,084 INFO : Inserting H3K9me1K14ac0 - BI10009
02 Feb 2021 10:49:39,110 INFO : 7% Done
02 Feb 2021 10:49:40,303 INFO : Inserting H3K9me2K14ac0 - BI10010
02 Feb 2021 10:49:40,329 INFO : 8% Done
02 Feb 2021 10:49:41,502 INFO : Inserting H3K9me3K14ac0 - BI10011
02 Feb 2021 10:49:41,538 INFO : 9% Done
02 Feb 2021 10:49:43,272 INFO : Inserting H3K9ac1K14ac0 - BI10012
02 Feb 2021 10:49:43,299 INFO : 10% Done
02 Feb 2021 10:49:44,454 INFO : Inserting H3K9me0K14ac1 - BI10013
02 Feb 2021 10:49:45,698 INFO : Inserting H3K9me1K14ac1 - BI10014
02 Feb 2021 10:49:45,751 INFO : 11% Done
02 Feb 2021 10:49:46,968 INFO : Inserting H3K9me2K14ac1 - BI10015
02 Feb 2021 10:49:47,009 INFO : 12% Done
02 Feb 2021 10:49:48,204 INFO : Inserting H3K9me3K14ac1 - BI10016
02 Feb 2021 10:49:48,231 INFO : 13% Done
02 Feb 2021 10:49:49,237 INFO : Inserting H3K9ac1K14ac1 - BI10017
02 Feb 2021 10:49:49,263 INFO : 14% Done
02 Feb 2021 10:49:50,291 INFO : Inserting H3K9me0S10ph1K14ac0 - BI10018
02 Feb 2021 10:49:51,242 INFO : Inserting H3K9me1S10ph1K14ac0 - BI10019
02 Feb 2021 10:49:51,285 INFO : 15% Done
02 Feb 2021 10:49:52,190 INFO : Inserting H3K9me2S10ph1K14ac0 - BI10020
02 Feb 2021 10:49:52,217 INFO : 16% Done
02 Feb 2021 10:49:53,455 INFO : Inserting H3K9me3S10ph1K14ac0 - BI10021
02 Feb 2021 10:49:54,533 INFO : Inserting H3K9ac1S10ph1K14ac0 - BI10022
02 Feb 2021 10:49:54,561 INFO : 17% Done
02 Feb 2021 10:49:55,628 INFO : Inserting H3K9me0S10ph1K14ac1 - BI10023
02 Feb 2021 10:49:55,677 INFO : 18% Done
02 Feb 2021 10:49:56,769 INFO : Inserting H3K9me1S10ph1K14ac1 - BI10024
02 Feb 2021 10:49:57,528 INFO : Inserting H3K9me2S10ph1K14ac1 - BI10025
02 Feb 2021 10:49:57,556 INFO : 19% Done
02 Feb 2021 10:49:58,852 INFO : Inserting H3K9me3S10ph1K14ac1 - BI10026
02 Feb 2021 10:49:58,885 INFO : 20% Done
02 Feb 2021 10:50:00,422 INFO : Inserting H3K9ac1S10ph1K14ac1 - BI10027
02 Feb 2021 10:50:00,447 INFO : 21% Done
02 Feb 2021 10:50:01,633 INFO : Inserting H3K18ac0K23ac0 - BI10028
02 Feb 2021 10:50:01,695 INFO : 22% Done
02 Feb 2021 10:50:02,996 INFO : Inserting H3K18ac1K23ac0 - BI10029
02 Feb 2021 10:50:04,079 INFO : Inserting H3K18ac0K23ac1 - BI10030
02 Feb 2021 10:50:04,097 INFO : 23% Done
02 Feb 2021 10:50:05,007 INFO : Inserting H3K18ac1K23ac1 - BI10031
02 Feb 2021 10:50:06,029 INFO : Inserting H3K18ub1K23ac0 - BI10032
02 Feb 2021 10:50:06,051 INFO : 24% Done
02 Feb 2021 10:50:07,427 INFO : Inserting H3K18ac0K23ub1 - BI10033
02 Feb 2021 10:50:07,449 INFO : 25% Done
02 Feb 2021 10:50:08,147 INFO : Inserting H3K27me0K36me0 - BI10034
02 Feb 2021 10:50:08,159 INFO : 26% Done
02 Feb 2021 10:50:09,453 INFO : Inserting H3K27me0K36me1 - BI10085
02 Feb 2021 10:50:09,477 INFO : 27% Done
02 Feb 2021 10:50:10,758 INFO : Inserting H3K27me0K36me2 - BI10086
02 Feb 2021 10:50:10,802 INFO : 28% Done
02 Feb 2021 10:50:12,671 INFO : Inserting H3K27me0K36me3 - BI10087
02 Feb 2021 10:50:13,619 INFO : Inserting H3K27me1K36me0 - BI10035
02 Feb 2021 10:50:13,646 INFO : 30% Done
02 Feb 2021 10:50:15,180 INFO : Inserting H3K27me1K36me1 - BI10036
02 Feb 2021 10:50:16,692 INFO : Inserting H3K27me1K36me2 - BI10037
02 Feb 2021 10:50:16,714 INFO : 31% Done
02 Feb 2021 10:50:17,861 INFO : Inserting H3K27me1K36me3 - BI10038
02 Feb 2021 10:50:17,884 INFO : 32% Done
02 Feb 2021 10:50:18,865 INFO : Inserting H3K27me2K36me0 - BI10039
02 Feb 2021 10:50:18,885 INFO : 33% Done
02 Feb 2021 10:50:19,891 INFO : Inserting H3K27me2K36me1 - BI10040
02 Feb 2021 10:50:20,690 INFO : Inserting H3K27me2K36me2 - BI10041
02 Feb 2021 10:50:20,717 INFO : 34% Done
02 Feb 2021 10:50:22,172 INFO : Inserting H3K27me2K36me3 - BI10042
02 Feb 2021 10:50:22,218 INFO : 36% Done
02 Feb 2021 10:50:24,649 INFO : Inserting H3K27me3K36me0 - BI10043
02 Feb 2021 10:50:24,672 INFO : 37% Done
02 Feb 2021 10:50:25,654 INFO : Inserting H3K27me3K36me1 - BI10044
02 Feb 2021 10:50:25,673 INFO : 38% Done
02 Feb 2021 10:50:26,930 INFO : Inserting H3K27me3K36me2 - BI10045
02 Feb 2021 10:50:28,134 INFO : Inserting H3K27me3K36me3 - BI10046
02 Feb 2021 10:50:28,166 INFO : 39% Done
02 Feb 2021 10:50:30,023 INFO : Inserting H3K27ac1K36me0 - BI10047
02 Feb 2021 10:50:30,045 INFO : 40% Done
02 Feb 2021 10:50:31,130 INFO : Inserting H3K27ac1K36me1 - BI10048
02 Feb 2021 10:50:31,150 INFO : 41% Done
02 Feb 2021 10:50:32,039 INFO : Inserting H3K27ac1K36me2 - BI10049
02 Feb 2021 10:50:32,058 INFO : 42% Done
02 Feb 2021 10:50:32,991 INFO : Inserting H3K27ac1K36me3 - BI10050
02 Feb 2021 10:50:33,959 INFO : Inserting H3.3K27me0K36me0 - BI10051
02 Feb 2021 10:50:33,986 INFO : 43% Done
02 Feb 2021 10:50:34,698 INFO : Inserting H3NORM(41-49) - BI10052
02 Feb 2021 10:50:34,710 INFO : 44% Done
02 Feb 2021 10:50:35,838 INFO : Inserting H3NORM(41-49) - BI10052p
02 Feb 2021 10:50:35,849 INFO : 45% Done
02 Feb 2021 10:50:36,656 INFO : Inserting H3K56me0 - BI10054
02 Feb 2021 10:50:36,667 INFO : 46% Done
02 Feb 2021 10:50:37,685 INFO : Inserting H3K56me1 - BI10055
02 Feb 2021 10:50:39,051 INFO : Inserting H3K56me2 - BI10056
02 Feb 2021 10:50:39,070 INFO : 47% Done
02 Feb 2021 10:50:40,123 INFO : Inserting H3K56ac1-BI10058
02 Feb 2021 10:50:40,171 INFO : 49% Done
02 Feb 2021 10:50:42,244 INFO : Inserting H3K79me0 - BI10060
02 Feb 2021 10:50:42,268 INFO : 50% Done
02 Feb 2021 10:50:43,766 INFO : Inserting H3K79me1 - BI10061
02 Feb 2021 10:50:45,019 INFO : Inserting H3K79me2 - BI10062
02 Feb 2021 10:50:45,039 INFO : 51% Done
02 Feb 2021 10:50:46,237 INFO : Inserting H4(4to17)ac0me0 - BI10088
02 Feb 2021 10:50:46,278 INFO : 53% Done
02 Feb 2021 10:50:48,687 INFO : Inserting H4(4to17)K5ac1me0_leftpeak - BI10089
02 Feb 2021 10:50:48,714 INFO : 54% Done
02 Feb 2021 10:50:49,891 INFO : Inserting H4(4to17)K12ac1_left peak - BI10091
02 Feb 2021 10:50:49,908 INFO : 56% Done
02 Feb 2021 10:50:50,789 INFO : Inserting H4(4to17)K16ac1me0 - BI10092
02 Feb 2021 10:50:50,800 INFO : 57% Done
02 Feb 2021 10:50:51,229 INFO : Inserting H4(4to17)K16ac0me1 - BI10102
02 Feb 2021 10:50:51,279 INFO : 58% Done
02 Feb 2021 10:50:54,163 INFO : Inserting H4(4to17)K5ac1K8ac1me0_left peak - BI10094
02 Feb 2021 10:50:54,220 INFO : 60% Done
02 Feb 2021 10:50:55,626 INFO : Inserting H4(4to17)K5ac1K16ac1me0_right peak - BI10095
02 Feb 2021 10:50:55,655 INFO : 61% Done
02 Feb 2021 10:50:57,099 INFO : Inserting H4(4to17)K8ac1K12ac1me0_left peak - BI10093
02 Feb 2021 10:50:57,127 INFO : 62% Done
02 Feb 2021 10:50:58,375 INFO : Inserting H4(4to17)K12ac1K16ac1me0 - BI10097
02 Feb 2021 10:50:58,409 INFO : 63% Done
02 Feb 2021 10:51:00,119 INFO : Inserting H4(4to17)K8ac1K12ac1K16ac1me0_right peak - BI10098
02 Feb 2021 10:51:00,146 INFO : 65% Done
02 Feb 2021 10:51:01,660 INFO : Inserting H4(4to17)K5ac1K8ac1K12ac1me0_left peak - BI10099
02 Feb 2021 10:51:01,716 INFO : 67% Done
02 Feb 2021 10:51:05,758 INFO : Inserting H4(4to17)K5ac1K8ac1K16ac1me0_right peak - BI10100
02 Feb 2021 10:51:05,789 INFO : 68% Done
02 Feb 2021 10:51:07,355 INFO : Inserting H4(4to17)K5ac1K8ac1K12ac1K16ac1me0 - BI10101
02 Feb 2021 10:51:07,420 INFO : 71% Done
02 Feb 2021 10:51:09,704 INFO : Inserting H4(68-78)AltNorm - BI10108
02 Feb 2021 10:51:09,751 INFO : 73% Done
02 Feb 2021 10:51:12,296 INFO : Inserting H4(68-78)AltNorm - BI10108p
02 Feb 2021 10:51:12,316 INFO : 74% Done
02 Feb 2021 10:51:13,141 INFO : Inserting H4(20to23)K20me0 - BI10103
02 Feb 2021 10:51:14,535 INFO : Inserting H4(20to23)K20me1 - BI10104
02 Feb 2021 10:51:14,598 INFO : 76% Done
02 Feb 2021 10:51:15,877 INFO : Inserting H4(20to23)K20me2 - BI10105
02 Feb 2021 10:51:15,903 INFO : 77% Done
02 Feb 2021 10:51:17,302 INFO : Inserting H4(20to23)K20me3 - BI10106
02 Feb 2021 10:51:17,326 INFO : 78% Done
02 Feb 2021 10:51:18,408 INFO : Inserting H2A(21to29)NORM - BI10109
02 Feb 2021 10:51:18,474 INFO : 80% Done
02 Feb 2021 10:51:20,373 INFO : Done parsing Skyline document.
02 Feb 2021 10:51:20,426 INFO : No group comparisons found.
02 Feb 2021 10:51:20,427 INFO : Calculating calibration curves
02 Feb 2021 10:51:21,046 INFO : 81% Done
02 Feb 2021 10:51:21,765 INFO : 82% Done
02 Feb 2021 10:51:22,880 INFO : 83% Done
02 Feb 2021 10:51:23,912 INFO : 84% Done
02 Feb 2021 10:51:24,690 INFO : 85% Done
02 Feb 2021 10:51:25,439 INFO : 86% Done
02 Feb 2021 10:51:26,036 INFO : 87% Done
02 Feb 2021 10:51:26,486 INFO : 88% Done
02 Feb 2021 10:51:27,208 INFO : 89% Done
02 Feb 2021 10:51:27,606 INFO : 90% Done
02 Feb 2021 10:51:28,120 INFO : 91% Done
02 Feb 2021 10:51:28,526 INFO : 92% Done
02 Feb 2021 10:51:28,930 INFO : 93% Done
02 Feb 2021 10:51:29,336 INFO : 94% Done
02 Feb 2021 10:51:29,779 INFO : 95% Done
02 Feb 2021 10:51:30,322 INFO : 96% Done
02 Feb 2021 10:51:30,759 INFO : 97% Done
02 Feb 2021 10:51:31,265 INFO : 98% Done
02 Feb 2021 10:51:31,566 INFO : Done calculating calibration curves.
02 Feb 2021 10:51:31,569 INFO : Creating and populating temp tables for Proportion values
02 Feb 2021 10:51:31,730 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
02 Feb 2021 10:51:34,373 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
02 Feb 2021 10:51:35,700 INFO : Cleaning up temp tables
02 Feb 2021 10:51:36,236 INFO : Completed import of Skyline document from LINCS_GCP_Plate96_annotated_minimized_2021-02-02_13-46-59.sky.zip
02 Feb 2021 10:51:36,245 INFO : 100% Done
02 Feb 2021 10:51:36,804 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'