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Running LINCS pipeline on PSP for: LINCS_P100_DIA_Plate91

P100

Job Status

Created: 2020-01-08 21:07:58
Modified: 2020-01-08 21:12:43
Email: vsharma@uw.edu
Status: ERROR
Info: Error in PSP job. Error: level 3: dry error: need more than 1 value to unpack
Description: Running LINCS pipeline on PSP for: LINCS_P100_DIA_Plate91
File Path: /data/labkey/files/LINCS-DCIC/PSP/P100/@files/LincsPSP_LINCS_P100_DIA_Plate91_2020-01-08_21-07-57.log
Files: LincsPSP_LINCS_P100_DIA_Plate91_2020-01-08_21-07-57.log
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Log File


08 Jan 2020 21:07:58,166 INFO : Running LINCS pipeline on PSP for:  LINCS_P100_DIA_Plate91
08 Jan 2020 21:07:58,166 INFO : =======================================
08 Jan 2020 21:07:58,347 INFO : Starting to run task 'org.labkey.lincs.psp.LincsPspTask' at location 'webserver-high-priority'
08 Jan 2020 21:07:58,348 INFO : Running LINCS PSP pipeline for LINCS_P100_DIA_Plate91
08 Jan 2020 21:07:58,348 INFO : Submitting job for runId: 80635, name: LINCS_P100_DIA_Plate91
08 Jan 2020 21:07:58,350 INFO : Looking for existing job with name LINCS_P100_DIA_Plate91_test4
08 Jan 2020 21:07:58,713 INFO : PSP job name: LINCS_P100_DIA_Plate91_test4
08 Jan 2020 21:07:58,714 INFO : Sending JSON:
08 Jan 2020 21:07:58,714 INFO : {
  "level 4": {"panorama": {
    "method": "PUT",
    "url": "https://panoramaweb.org/_webdav/LINCS-DCIC/PSP/P100/%40files/GCT/LINCS_P100_DIA_Plate91_LVL4.gct"
  }},
  "assay": "P100",
  "name": "LINCS_P100_DIA_Plate91_test4",
  "config": {"panorama": {
    "method": "PUT",
    "url": "https://panoramaweb.org/_webdav/LINCS-DCIC/PSP/P100/%40files/GCT/LINCS_P100_DIA_Plate91.cfg"
  }},
  "level 2": {"panorama": {
    "method": "GET",
    "url": "https://panoramaweb.org/lincs/LINCS-DCIC/PSP/P100/runGCTReportApi.view?runId=80635&remote=true&reportName=GCT%20File%20P100"
  }},
  "level 3": {"panorama": {
    "method": "PUT",
    "url": "https://panoramaweb.org/_webdav/LINCS-DCIC/PSP/P100/%40files/GCT/LINCS_P100_DIA_Plate91_LVL3.gct"
  }}
}
08 Jan 2020 21:07:58,714 INFO : Sending POST request to https://api.clue.io/api/psp
08 Jan 2020 21:07:58,915 INFO : Response code - 200
08 Jan 2020 21:07:58,916 INFO : Response from server: {"name":"LINCS_P100_DIA_Plate91_test4","assay":"P100","status":"Waiting_To_Download","id":"5e16b52e5beec6001388e470","created":"2020-01-09T05:07:58.786Z","last_modified":"2020-01-09T05:07:58.786Z","level 2":{"panorama":{"method":"GET","url":"https://panoramaweb.org/lincs/LINCS-DCIC/PSP/P100/runGCTReportApi.view?runId=80635&remote=true&reportName=GCT%20File%20P100"}},"level 3":{"panorama":{"method":"PUT","url":"https://panoramaweb.org/_webdav/LINCS-DCIC/PSP/P100/%40files/GCT/LINCS_P100_DIA_Plate91_LVL3.gct"}},"level 4":{"panorama":{"method":"PUT","url":"https://panoramaweb.org/_webdav/LINCS-DCIC/PSP/P100/%40files/GCT/LINCS_P100_DIA_Plate91_LVL4.gct"}},"config":{"panorama":{"method":"PUT","url":"https://panoramaweb.org/_webdav/LINCS-DCIC/PSP/P100/%40files/GCT/LINCS_P100_DIA_Plate91.cfg"}}}
08 Jan 2020 21:07:58,916 INFO : Sent POST request to https://api.clue.io/api/psp
08 Jan 2020 21:07:58,922 INFO : Checking status of job 5e16b52e5beec6001388e470
08 Jan 2020 21:07:59,043 INFO : Status: Waiting_To_Download
08 Jan 2020 21:08:19,043 INFO : Checking status of job 5e16b52e5beec6001388e470
08 Jan 2020 21:08:19,317 INFO : Status: created LVL2 GCT
08 Jan 2020 21:08:39,318 INFO : Checking status of job 5e16b52e5beec6001388e470
08 Jan 2020 21:08:39,602 INFO : Status: created LVL2 GCT
08 Jan 2020 21:08:59,603 INFO : Checking status of job 5e16b52e5beec6001388e470
08 Jan 2020 21:08:59,885 INFO : Status: created LVL2 GCT
08 Jan 2020 21:09:19,886 INFO : Checking status of job 5e16b52e5beec6001388e470
08 Jan 2020 21:09:20,249 INFO : Status: created LVL2 GCT
08 Jan 2020 21:09:40,250 INFO : Checking status of job 5e16b52e5beec6001388e470
08 Jan 2020 21:09:40,524 INFO : Status: created LVL2 GCT
08 Jan 2020 21:10:00,524 INFO : Checking status of job 5e16b52e5beec6001388e470
08 Jan 2020 21:10:00,801 INFO : Status: created LVL2 GCT
08 Jan 2020 21:10:20,802 INFO : Checking status of job 5e16b52e5beec6001388e470
08 Jan 2020 21:10:21,073 INFO : Status: created LVL2 GCT
08 Jan 2020 21:10:41,073 INFO : Checking status of job 5e16b52e5beec6001388e470
08 Jan 2020 21:10:41,344 INFO : Status: created LVL2 GCT
08 Jan 2020 21:11:01,345 INFO : Checking status of job 5e16b52e5beec6001388e470
08 Jan 2020 21:11:01,618 INFO : Status: created LVL2 GCT
08 Jan 2020 21:11:21,618 INFO : Checking status of job 5e16b52e5beec6001388e470
08 Jan 2020 21:11:21,891 INFO : Status: created LVL2 GCT
08 Jan 2020 21:11:41,891 INFO : Checking status of job 5e16b52e5beec6001388e470
08 Jan 2020 21:11:42,166 INFO : Status: created LVL2 GCT
08 Jan 2020 21:12:02,166 INFO : Checking status of job 5e16b52e5beec6001388e470
08 Jan 2020 21:12:02,521 INFO : Status: created LVL2 GCT
08 Jan 2020 21:12:22,521 INFO : Checking status of job 5e16b52e5beec6001388e470
08 Jan 2020 21:12:22,795 INFO : Status: created LVL2 GCT
08 Jan 2020 21:12:42,796 INFO : Checking status of job 5e16b52e5beec6001388e470
08 Jan 2020 21:12:43,073 INFO : Status: created LVL2 GCT
08 Jan 2020 21:12:43,073 ERROR: Error in PSP job. Error: level 3: dry error: need more than 1 value to unpack
08 Jan 2020 21:12:43,247 INFO : Finished running LINCS PSP pipeline.
08 Jan 2020 21:12:43,247 INFO : Successfully completed task 'org.labkey.lincs.psp.LincsPspTask'