G3N4D0: /Kueltz Lab - UCDavis/DIA assays/Li_2020_Integ-Comp-Biol

G3N4D0

Li and Kültz (2020) Integ. Comp. Biol.

Protein

File	BH1.1_2020-02-12_15-16-08.sky.zip 449 MB SkyP file (link only, 1KB) Full Skyline file Copy relative URL to clipboard Copy full URL to clipboard
Description	Tapasin
Decoy	false
Accession	G3N4D0
Note

Sequence Coverage

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By: Replicate: Modified forms: Combined Stacked

The number displayed on each peptide box is the rank
1										11										21										31										41										51										61										71										81										91
M	I	N	I	S	T	I	Y	T	L	C	L	V	A	A	V	C	C	G	E	A	C	S	S	C	P	V	L	E	C	W	F	V	Q	E	K	T	G	R	G	G	G	L	A	A	A	T	T	L	E	K	S	L	L	H	I	Q	T	D	P	H	P	A	E	S	Q	Q	A	P	P	D	I	H	P	D	R	V	Y	L	I	T	D	P	A	G	T	L	C	H	R	S	L	N	P	P	R	G	S	V	E
																																																																												2

101										111										121										131										141										151										161										171										181										191
K	P	Q	C	E	I	N	P	F	L	P	Q	P	S	T	L	K	W	A	S	P	L	T	D	S	A	S	S	P	I	Y	L	Q	A	D	W	F	S	T	A	L	Q	G	L	N	G	Q	L	A	V	S	T	I	T	R	A	P	T	A	T	K	E	H	R	V	V	L	S	V	T	T	T	T	V	S	V	Q	S	R	L	G	G	P	V	L	L	D	C	G	L	W	A	D	P	S	S	P	L	S	G


201										211										221										231										241										251										261										271										281										291
S	G	F	A	V	E	W	R	Y	Q	F	R	G	D	G	R	L	V	L	A	Y	D	G	K	T	D	R	L	A	D	V	Q	E	E	G	A	T	L	D	Y	E	G	L	H	Q	R	G	N	A	S	L	I	L	R	E	A	K	V	R	H	S	G	L	Y	I	C	T	V	Y	L	P	Y	L	V	A	Q	V	T	M	E	L	Q	V	V	E	P	P	S	L	S	I	H	P	S	P	L	P	L	A	V
																											1

301										311										321										331										341										351										361										371										381										391
P	G	Q	S	F	T	V	Q	C	E	A	S	G	F	A	P	L	A	L	E	L	S	W	E	F	K	G	T	D	G	K	F	R	P	L	G	S	G	S	L	T	G	H	R	Q	A	W	D	G	T	Y	S	Q	S	T	R	L	E	L	D	S	A	E	L	D	L	G	R	G	G	E	V	T	C	V	A	V	H	L	G	G	T	R	R	A	S	V	T	L	N	V	I	G	F	S	S	P	S	I	E


401										411										421										431
D	S	M	A	M	V	G	V	A	L	V	L	Y	G	L	I	K	F	V	S	W	T	V	T	S	S	G	S	D	E	A	G	Q	R	E	K	K	D	K

Intensity

(Log 10 base)

Features

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Chain

Domain

Signal peptide

Annotations for G3N4D0

Description	Tapasin
Gene name
Organism	Unknown unknown

Genbank IDs	GIs	Swiss-Prot Accessions	Swiss-Prot Names	Ensembl	IPI Numbers	GO Categories
none loaded	none loaded	none loaded	none loaded	none loaded	none loaded	none loaded

Peptides

Select All Select None Show Selected Show Unselected Show All	Peptide Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Peptide Neutral Mass Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Missed Cleavages Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Avg. Measured RT Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Predicted RT Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	RT Score Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart
	VYLITDPAGTLCHR	1557.7973	0	104.3340	104.3300	69.94126
	LADVQEEGATLDYEGLHQR	2143.0182	0	86.4259	86.3500	52.66263

Chromatograms

Display Chart Settings

Summary Charts

Peak Areas

Retention Times