sp|P00861|DCDA_ECOLI: /JBEI/T.S. Batth et al. Metab. Eng. 2014 - A targeted proteomics toolkit for high-throughput absolute quantification of Escherichia coli proteins/Individual QconCAT Methods

sp|P00861|DCDA_ECOLI

Individual QconCAT Methods

Protein

File	Qcat4-Ind.sky 158 KB SkyP file (link only, 1KB) Full Skyline file Copy relative URL to clipboard Copy full URL to clipboard
Description	Diaminopimelate decarboxylase OS=Escherichia coli (strain K12) GN=lysA PE=1 SV=1
Decoy	false
Note

Sequence Coverage

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By: Replicate: Modified forms: Combined Stacked

The number displayed on each peptide box is the rank
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M	P	H	S	L	F	S	T	D	T	D	L	T	A	E	N	L	L	R	L	P	A	E	F	G	C	P	V	W	V	Y	D	A	Q	I	I	R	R	Q	I	A	A	L	K	Q	F	D	V	V	R	F	A	Q	K	A	C	S	N	I	H	I	L	R	L	M	R	E	Q	G	V	K	V	D	S	V	S	L	G	E	I	E	R	A	L	A	A	G	Y	N	P	Q	T	H	P	D	D	I	V	F	T
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101										111										121										131										141										151										161										171										181										191
A	D	V	I	D	Q	A	T	L	E	R	V	S	E	L	Q	I	P	V	N	A	G	S	V	D	M	L	D	Q	L	G	Q	V	S	P	G	H	R	V	W	L	R	V	N	P	G	F	G	H	G	H	S	Q	K	T	N	T	G	G	E	N	S	K	H	G	I	W	Y	T	D	L	P	A	A	L	D	V	I	Q	R	H	H	L	Q	L	V	G	I	H	M	H	I	G	S	G	V	D	Y	A	H


201										211										221										231										241										251										261										271										281										291
L	E	Q	V	C	G	A	M	V	R	Q	V	I	E	F	G	Q	D	L	Q	A	I	S	A	G	G	G	L	S	V	P	Y	Q	Q	G	E	E	A	V	D	T	E	H	Y	Y	G	L	W	N	A	A	R	E	Q	I	A	R	H	L	G	H	P	V	K	L	E	I	E	P	G	R	F	L	V	A	Q	S	G	V	L	I	T	Q	V	R	S	V	K	Q	M	G	S	R	H	F	V	L	V	D	A
																																																																							2

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G	F	N	D	L	M	R	P	A	M	Y	G	S	Y	H	H	I	S	A	L	A	A	D	G	R	S	L	E	H	A	P	T	V	E	T	V	V	A	G	P	L	C	E	S	G	D	V	F	T	Q	Q	E	G	G	N	V	E	T	R	A	L	P	E	V	K	A	G	D	Y	L	V	L	H	D	T	G	A	Y	G	A	S	M	S	S	N	Y	N	S	R	P	L	L	P	E	V	L	F	D	N	G


401										411
Q	A	R	L	I	R	R	R	Q	T	I	E	E	L	L	A	L	E	L	L

Intensity

(Log 10 base)

Annotations for sp|P00861|DCDA_ECOLI

Description	Diaminopimelate decarboxylase (short name: DAP decarboxylase)
Gene name	lysA
Organisms	Escherichia coli Escherichia coli (strain ATCC 9637 / CCM 2024 / DSM 1116 / NCIMB 8666 / NRRL B-766 / W) Escherichia coli (strain K12)

Genbank IDs	GIs	Swiss-Prot Accessions	Swiss-Prot Names	Ensembl	IPI Numbers	GO Categories	Biological Processes	Molecular Functions
NP_417315.1 YP_006125714.1 YP_006174445.1 YP_491043.1	none loaded	E0IWI3 H9Y5F7 P00861 Q2M9Z9	DCDA_ECOLW DCDA_ECOLI	none loaded	none loaded	GO:0008836 GO:0009089 GO:0030170	Amino-acid biosynthesis Lysine biosynthesis	Decarboxylase Lyase

Peptides

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	QFDVVR	762.4025	0	2.8903
	FLVAQSGVLITQVR	1529.8929	0	11.0665

Chromatograms

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Summary Charts

Peak Areas

Retention Times