26 Feb 2025 11:35:15,246 DEBUG: Resetting Job ID: 8aa18a1e-d6a6-103d-beb7-1cc91aa94700
26 Feb 2025 11:35:19,668 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
26 Feb 2025 11:35:19,669 INFO : Starting to import Skyline document from Aducanumab_Selectivity_2025-02-26_14-35-03.sky.zip
26 Feb 2025 11:35:19,669 INFO : Expanding Aducanumab_chimeric.protdb
26 Feb 2025 11:35:19,670 INFO : Expanding Aducanumab_Selectivity.skyd
26 Feb 2025 11:35:19,708 INFO : Expanding Aducanumab_Selectivity.sky.view
26 Feb 2025 11:35:19,709 INFO : Expanding Aducanumab_Selectivity.sky
26 Feb 2025 11:35:19,717 INFO : Expanding Aducanumab_Selectivity.skyl
26 Feb 2025 11:35:19,719 INFO : Reading Skyline file, Aducanumab_Selectivity.sky, to determine if the TransitionChromInfos in the document should be stored...
26 Feb 2025 11:35:19,750 INFO : TransitionChromInfo counts or precursor counts are within the allowed limits. TransitionChromInfos will be stored
26 Feb 2025 11:35:19,752 INFO : 1% Done
26 Feb 2025 11:35:19,753 DEBUG: Starting to load chromatogram headers
26 Feb 2025 11:35:19,754 DEBUG: Done loading chromatogram headers
26 Feb 2025 11:35:19,776 WARN : Unable to resolve D:\Aducanumab project\Stability test\Adu_Plasma_3hr-3.raw to SampleFile, will not import its sample-scoped chromatogram
26 Feb 2025 11:35:19,776 WARN : Unable to resolve D:\Aducanumab project\Stability test\Adu_Plasma_3hr-2.raw to SampleFile, will not import its sample-scoped chromatogram
26 Feb 2025 11:35:19,776 WARN : Unable to resolve D:\Aducanumab project\Stability test\Adu_Plasma_6hr-2.raw to SampleFile, will not import its sample-scoped chromatogram
26 Feb 2025 11:35:19,776 WARN : Unable to resolve D:\Aducanumab project\Stability test\Adu_Plasma_6hr-1.raw to SampleFile, will not import its sample-scoped chromatogram
26 Feb 2025 11:35:19,776 WARN : Unable to resolve D:\Aducanumab project\Stability test\Adu_Plasma_3hr-1.raw to SampleFile, will not import its sample-scoped chromatogram
26 Feb 2025 11:35:19,776 WARN : Unable to resolve D:\Aducanumab project\Stability test\Adu_Plasma_6hr-3.raw to SampleFile, will not import its sample-scoped chromatogram
26 Feb 2025 11:35:19,776 WARN : Unable to resolve D:\Aducanumab project\Stability test\Adu_selectivity_Plasma_2_25x.raw to SampleFile, will not import its sample-scoped chromatogram
26 Feb 2025 11:35:19,776 WARN : Unable to resolve D:\Aducanumab project\Stability test\Adu_selectivity_Plasma_3_25x.raw to SampleFile, will not import its sample-scoped chromatogram
26 Feb 2025 11:35:19,776 WARN : Unable to resolve D:\Aducanumab project\Stability test\Adu_selectivity_Plasma_1_25x.raw to SampleFile, will not import its sample-scoped chromatogram
26 Feb 2025 11:35:19,889 INFO : Inserting sp|P0001|Aducanumab
26 Feb 2025 11:35:20,442 INFO : 18% Done
26 Feb 2025 11:35:20,815 DEBUG: Total peptides inserted: 1
26 Feb 2025 11:35:20,816 INFO : 19% Done
26 Feb 2025 11:35:20,816 INFO : Inserting sp|P0000|Aducanumab
26 Feb 2025 11:35:21,061 INFO : 31% Done
26 Feb 2025 11:35:21,313 DEBUG: Total peptides inserted: 1
26 Feb 2025 11:35:21,313 INFO : Inserting sp|P0000|Aducanumab
26 Feb 2025 11:35:22,759 INFO : 61% Done
26 Feb 2025 11:35:23,258 DEBUG: Total peptides inserted: 1
26 Feb 2025 11:35:23,258 INFO : Inserting sp|P0001|Aducanumab
26 Feb 2025 11:35:23,862 INFO : 80% Done
26 Feb 2025 11:35:24,284 DEBUG: Total peptides inserted: 1
26 Feb 2025 11:35:24,284 INFO : Done parsing Skyline document.
26 Feb 2025 11:35:24,333 INFO : No group comparisons found.
26 Feb 2025 11:35:24,333 INFO : Calculating calibration curves
26 Feb 2025 11:35:24,334 DEBUG: Calculating calibration curve for sp|P0001|Aducanumab, 1 of 4
26 Feb 2025 11:35:24,431 INFO : 85% Done
26 Feb 2025 11:35:24,431 DEBUG: Calculating calibration curve for sp|P0000|Aducanumab, 2 of 4
26 Feb 2025 11:35:24,491 INFO : 89% Done
26 Feb 2025 11:35:24,491 DEBUG: Calculating calibration curve for sp|P0000|Aducanumab, 3 of 4
26 Feb 2025 11:35:24,656 INFO : 94% Done
26 Feb 2025 11:35:24,656 DEBUG: Calculating calibration curve for sp|P0001|Aducanumab, 4 of 4
26 Feb 2025 11:35:24,754 INFO : 98% Done
26 Feb 2025 11:35:24,755 INFO : Done calculating calibration curves.
26 Feb 2025 11:35:24,876 WARN : Missed importing 1 chromatograms from sample file D:\Aducanumab project\Stability test\Adu_Plasma_6hr-1.raw
26 Feb 2025 11:35:24,876 WARN : Missed importing 1 chromatograms from sample file D:\Aducanumab project\Stability test\Adu_Plasma_3hr-3.raw
26 Feb 2025 11:35:24,877 WARN : Missed importing 1 chromatograms from sample file D:\Aducanumab project\Stability test\Adu_selectivity_Plasma_1_25x.raw
26 Feb 2025 11:35:24,877 WARN : Missed importing 1 chromatograms from sample file D:\Aducanumab project\Stability test\Adu_Plasma_6hr-2.raw
26 Feb 2025 11:35:24,877 WARN : Missed importing 1 chromatograms from sample file D:\Aducanumab project\Stability test\Adu_Plasma_3hr-2.raw
26 Feb 2025 11:35:24,877 WARN : Missed importing 1 chromatograms from sample file D:\Aducanumab project\Stability test\Adu_Plasma_3hr-1.raw
26 Feb 2025 11:35:24,877 WARN : Missed importing 1 chromatograms from sample file D:\Aducanumab project\Stability test\Adu_selectivity_Plasma_2_25x.raw
26 Feb 2025 11:35:24,877 WARN : Missed importing 1 chromatograms from sample file D:\Aducanumab project\Stability test\Adu_selectivity_Plasma_3_25x.raw
26 Feb 2025 11:35:24,877 WARN : Missed importing 1 chromatograms from sample file D:\Aducanumab project\Stability test\Adu_Plasma_6hr-3.raw
26 Feb 2025 11:35:24,877 INFO : Creating and populating temp tables for Proportion values
26 Feb 2025 11:35:24,880 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
26 Feb 2025 11:35:24,888 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
26 Feb 2025 11:35:24,891 INFO : Cleaning up temp tables
26 Feb 2025 11:35:25,128 INFO : Completed import of Skyline document from Aducanumab_Selectivity_2025-02-26_14-35-03.sky.zip
26 Feb 2025 11:35:25,130 INFO : 100% Done
26 Feb 2025 11:35:25,381 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'