17 Sep 2025 09:40:07,793 DEBUG: Resetting Job ID: dd210e4f-7612-103e-8e6e-1cc91aa98000
17 Sep 2025 09:40:07,808 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
17 Sep 2025 09:40:07,809 INFO : Starting to import Skyline document from XA00305PRMPUb.sky
17 Sep 2025 09:40:07,809 INFO : Reading Skyline file, XA00305PRMPUb.sky, to determine if the TransitionChromInfos in the document should be stored...
17 Sep 2025 09:40:07,835 INFO : TransitionChromInfo counts or precursor counts are within the allowed limits. TransitionChromInfos will be stored
17 Sep 2025 09:40:07,836 INFO : 3% Done
17 Sep 2025 09:40:07,836 INFO : Copying SKYD to temp directory for import purposes
17 Sep 2025 09:40:07,858 INFO : Copying complete
17 Sep 2025 09:40:07,858 DEBUG: Starting to load chromatogram headers
17 Sep 2025 09:40:07,858 DEBUG: Done loading chromatogram headers
17 Sep 2025 09:40:07,998 INFO : Inserting TRINITY_DN22693_c0_g2_m.4399
17 Sep 2025 09:40:08,004 INFO : 7% Done
17 Sep 2025 09:40:08,012 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:40:08,012 INFO : Inserting TRINITY_DN25370_c0_g1_m.7293
17 Sep 2025 09:40:08,016 INFO : 11% Done
17 Sep 2025 09:40:08,024 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:40:08,024 INFO : Inserting TRINITY_DN25809_c1_g1_m.7899
17 Sep 2025 09:40:08,027 INFO : 14% Done
17 Sep 2025 09:40:08,034 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:40:08,034 INFO : Inserting TRINITY_DN26394_c0_g1_m.8768
17 Sep 2025 09:40:08,038 INFO : 17% Done
17 Sep 2025 09:40:08,045 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:40:08,046 INFO : 18% Done
17 Sep 2025 09:40:08,046 INFO : Inserting TRINITY_DN27268_c1_g2_m.10149
17 Sep 2025 09:40:08,049 INFO : 21% Done
17 Sep 2025 09:40:08,056 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:40:08,056 INFO : Inserting TRINITY_DN29032_c1_g3_m.13375
17 Sep 2025 09:40:08,060 INFO : 23% Done
17 Sep 2025 09:40:08,066 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:40:08,067 INFO : 24% Done
17 Sep 2025 09:40:08,067 INFO : Inserting TRINITY_DN29990_c0_g1_m.15215
17 Sep 2025 09:40:08,071 INFO : 26% Done
17 Sep 2025 09:40:08,079 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:40:08,079 INFO : Inserting TRINITY_DN30412_c0_g1_m.16062
17 Sep 2025 09:40:08,083 INFO : 29% Done
17 Sep 2025 09:40:08,090 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:40:08,091 INFO : 30% Done
17 Sep 2025 09:40:08,091 INFO : Inserting TRINITY_DN30601_c1_g2_m.16449
17 Sep 2025 09:40:08,095 INFO : 33% Done
17 Sep 2025 09:40:08,102 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:40:08,102 INFO : Inserting TRINITY_DN31071_c1_g1_m.17478
17 Sep 2025 09:40:08,106 INFO : 37% Done
17 Sep 2025 09:40:08,113 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:40:08,113 INFO : Inserting TRINITY_DN31109_c2_g1_m.17562
17 Sep 2025 09:40:08,117 INFO : 39% Done
17 Sep 2025 09:40:08,123 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:40:08,123 INFO : Inserting TRINITY_DN32021_c1_g1_m.19600
17 Sep 2025 09:40:08,127 INFO : 43% Done
17 Sep 2025 09:40:08,134 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:40:08,134 INFO : Inserting TRINITY_DN33066_c0_g1_m.22079
17 Sep 2025 09:40:08,137 INFO : 46% Done
17 Sep 2025 09:40:08,144 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:40:08,145 INFO : 47% Done
17 Sep 2025 09:40:08,145 INFO : Inserting TRINITY_DN33418_c0_g2_m.23035
17 Sep 2025 09:40:08,149 INFO : 49% Done
17 Sep 2025 09:40:08,155 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:40:08,155 INFO : Inserting TRINITY_DN33742_c0_g1_m.23899
17 Sep 2025 09:40:08,159 INFO : 53% Done
17 Sep 2025 09:40:08,166 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:40:08,166 INFO : Inserting TRINITY_DN33853_c1_g1_m.24197
17 Sep 2025 09:40:08,170 INFO : 56% Done
17 Sep 2025 09:40:08,177 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:40:08,178 INFO : 57% Done
17 Sep 2025 09:40:08,178 INFO : Inserting TRINITY_DN34030_c2_g1_m.24680
17 Sep 2025 09:40:08,182 INFO : 59% Done
17 Sep 2025 09:40:08,189 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:40:08,189 INFO : Inserting TRINITY_DN34489_c1_g4_m.25957
17 Sep 2025 09:40:08,193 INFO : 63% Done
17 Sep 2025 09:40:08,200 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:40:08,200 INFO : Inserting TRINITY_DN34718_c0_g1_m.26628
17 Sep 2025 09:40:08,204 INFO : 66% Done
17 Sep 2025 09:40:08,210 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:40:08,210 INFO : Inserting TRINITY_DN35339_c0_g1_m.28496
17 Sep 2025 09:40:08,214 INFO : 69% Done
17 Sep 2025 09:40:08,221 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:40:08,222 INFO : 70% Done
17 Sep 2025 09:40:08,222 INFO : Inserting TRINITY_DN26785_c0_g2_m.9374
17 Sep 2025 09:40:08,226 INFO : 72% Done
17 Sep 2025 09:40:08,232 INFO : 74% Done
17 Sep 2025 09:40:08,240 DEBUG: Total peptides inserted: 2
17 Sep 2025 09:40:08,240 INFO : Inserting TRINITY_DN28099_c0_g1_m.11650
17 Sep 2025 09:40:08,244 INFO : 78% Done
17 Sep 2025 09:40:08,252 INFO : 80% Done
17 Sep 2025 09:40:08,258 DEBUG: Total peptides inserted: 2
17 Sep 2025 09:40:08,258 INFO : Inserting TRINITY_DN31990_c0_g1_m.19545
17 Sep 2025 09:40:08,262 INFO : 84% Done
17 Sep 2025 09:40:08,270 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:40:08,270 INFO : Inserting TRINITY_DN32522_c0_g1_m.20740
17 Sep 2025 09:40:08,273 INFO : 87% Done
17 Sep 2025 09:40:08,281 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:40:08,281 INFO : 88% Done
17 Sep 2025 09:40:08,281 INFO : Inserting TRINITY_DN34364_c0_g1_m.25588
17 Sep 2025 09:40:08,284 INFO : 91% Done
17 Sep 2025 09:40:08,292 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:40:08,292 INFO : Inserting TRINITY_DN35162_c1_g1_m.27944
17 Sep 2025 09:40:08,295 INFO : 94% Done
17 Sep 2025 09:40:08,303 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:40:08,303 INFO : 95% Done
17 Sep 2025 09:40:08,303 INFO : Inserting TRINITY_DN36406_c1_g1_m.32150
17 Sep 2025 09:40:08,307 INFO : 98% Done
17 Sep 2025 09:40:08,314 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:40:08,314 INFO : Done parsing Skyline document.
17 Sep 2025 09:40:08,715 INFO : Creating and populating temp tables for Proportion values
17 Sep 2025 09:40:08,720 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
17 Sep 2025 09:40:08,727 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
17 Sep 2025 09:40:08,733 INFO : Cleaning up temp tables
17 Sep 2025 09:40:08,950 INFO : Deleted temp copy of SKYD file
17 Sep 2025 09:40:08,950 INFO : Completed import of Skyline document from XA00305PRMPUb.sky
17 Sep 2025 09:40:08,952 INFO : 100% Done
17 Sep 2025 09:40:09,180 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'