17 Sep 2025 09:31:21,606 DEBUG: Resetting Job ID: 682565cb-7611-103e-8e6e-1cc91aa98000
17 Sep 2025 09:31:21,622 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
17 Sep 2025 09:31:21,623 INFO : Starting to import Skyline document from XA00305PRMPST.sky
17 Sep 2025 09:31:21,623 INFO : Reading Skyline file, XA00305PRMPST.sky, to determine if the TransitionChromInfos in the document should be stored...
17 Sep 2025 09:31:21,626 INFO : TransitionChromInfo counts or precursor counts are within the allowed limits. TransitionChromInfos will be stored
17 Sep 2025 09:31:21,627 INFO : 3% Done
17 Sep 2025 09:31:21,627 INFO : Copying SKYD to temp directory for import purposes
17 Sep 2025 09:31:21,669 INFO : Copying complete
17 Sep 2025 09:31:21,670 DEBUG: Starting to load chromatogram headers
17 Sep 2025 09:31:21,670 DEBUG: Done loading chromatogram headers
17 Sep 2025 09:31:21,806 INFO : 5% Done
17 Sep 2025 09:31:21,806 INFO : Inserting TRINITY_DN28171_c0_g1_m.11780
17 Sep 2025 09:31:21,813 INFO : 8% Done
17 Sep 2025 09:31:21,823 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:31:21,824 INFO : Inserting TRINITY_DN29486_c0_g1_m.14205
17 Sep 2025 09:31:21,828 INFO : 12% Done
17 Sep 2025 09:31:21,836 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:31:21,836 INFO : Inserting TRINITY_DN29333_c0_g1_m.13928
17 Sep 2025 09:31:21,839 INFO : 15% Done
17 Sep 2025 09:31:21,846 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:31:21,847 INFO : Inserting TRINITY_DN33695_c0_g1_m.23778
17 Sep 2025 09:31:21,849 INFO : 18% Done
17 Sep 2025 09:31:21,856 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:31:21,857 INFO : 19% Done
17 Sep 2025 09:31:21,857 INFO : Inserting TRINITY_DN33927_c0_g2_m.24384
17 Sep 2025 09:31:21,860 INFO : 22% Done
17 Sep 2025 09:31:21,867 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:31:21,867 INFO : Inserting TRINITY_DN34519_c3_g1_m.26036
17 Sep 2025 09:31:21,871 INFO : 25% Done
17 Sep 2025 09:31:21,877 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:31:21,877 INFO : Inserting TRINITY_DN26086_c0_g1_m.8320
17 Sep 2025 09:31:21,881 INFO : 28% Done
17 Sep 2025 09:31:21,889 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:31:21,889 INFO : Inserting TRINITY_DN26425_c1_g1_m.8811
17 Sep 2025 09:31:21,892 INFO : 32% Done
17 Sep 2025 09:31:21,899 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:31:21,899 INFO : Inserting TRINITY_DN33651_c4_g1_m.23638
17 Sep 2025 09:31:21,902 INFO : 35% Done
17 Sep 2025 09:31:21,909 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:31:21,909 INFO : Inserting TRINITY_DN33036_c0_g1_m.21999
17 Sep 2025 09:31:21,912 INFO : 38% Done
17 Sep 2025 09:31:21,918 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:31:21,918 INFO : Inserting TRINITY_DN33850_c0_g1_m.24187
17 Sep 2025 09:31:21,921 INFO : 41% Done
17 Sep 2025 09:31:21,927 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:31:21,927 INFO : Inserting TRINITY_DN29030_c1_g1_m.13370
17 Sep 2025 09:31:21,931 INFO : 44% Done
17 Sep 2025 09:31:21,938 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:31:21,938 INFO : 45% Done
17 Sep 2025 09:31:21,938 INFO : Inserting TRINITY_DN31118_c0_g1_m.17578
17 Sep 2025 09:31:21,942 INFO : 47% Done
17 Sep 2025 09:31:21,947 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:31:21,947 INFO : Inserting TRINITY_DN35972_c2_g1_m.30509
17 Sep 2025 09:31:21,950 INFO : 50% Done
17 Sep 2025 09:31:21,957 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:31:21,957 INFO : Inserting TRINITY_DN24793_c0_g1_m.6543
17 Sep 2025 09:31:21,960 INFO : 54% Done
17 Sep 2025 09:31:21,967 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:31:21,967 INFO : Inserting TRINITY_DN24988_c0_g1_m.6819
17 Sep 2025 09:31:21,971 INFO : 57% Done
17 Sep 2025 09:31:21,977 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:31:21,977 INFO : Inserting TRINITY_DN32817_c0_g1_m.21449
17 Sep 2025 09:31:21,980 INFO : 60% Done
17 Sep 2025 09:31:21,986 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:31:21,986 INFO : Inserting TRINITY_DN35743_c1_g1_m.29751
17 Sep 2025 09:31:21,990 INFO : 64% Done
17 Sep 2025 09:31:21,998 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:31:21,998 INFO : Inserting TRINITY_DN36228_c0_g1_m.31428
17 Sep 2025 09:31:22,002 INFO : 68% Done
17 Sep 2025 09:31:22,008 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:31:22,008 INFO : Inserting TRINITY_DN26181_c0_g1_m.8453
17 Sep 2025 09:31:22,011 INFO : 71% Done
17 Sep 2025 09:31:22,018 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:31:22,018 INFO : Inserting TRINITY_DN27904_c0_g1_m.11304
17 Sep 2025 09:31:22,021 INFO : 74% Done
17 Sep 2025 09:31:22,028 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:31:22,028 INFO : Inserting TRINITY_DN32805_c0_g1_m.21406
17 Sep 2025 09:31:22,031 INFO : 77% Done
17 Sep 2025 09:31:22,038 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:31:22,039 INFO : 78% Done
17 Sep 2025 09:31:22,039 INFO : Inserting TRINITY_DN25716_c1_g1_m.7776
17 Sep 2025 09:31:22,042 INFO : 81% Done
17 Sep 2025 09:31:22,050 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:31:22,050 INFO : Inserting TRINITY_DN34560_c2_g1_m.26158
17 Sep 2025 09:31:22,053 INFO : 85% Done
17 Sep 2025 09:31:22,060 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:31:22,060 INFO : Inserting TRINITY_DN36196_c0_g1_m.31310
17 Sep 2025 09:31:22,064 INFO : 89% Done
17 Sep 2025 09:31:22,070 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:31:22,070 INFO : Inserting TRINITY_DN33315_c0_g1_m.22741
17 Sep 2025 09:31:22,074 INFO : 91% Done
17 Sep 2025 09:31:22,080 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:31:22,080 INFO : 92% Done
17 Sep 2025 09:31:22,080 INFO : Inserting TRINITY_DN35948_c3_g1_m.30419
17 Sep 2025 09:31:22,084 INFO : 94% Done
17 Sep 2025 09:31:22,090 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:31:22,091 INFO : 95% Done
17 Sep 2025 09:31:22,091 INFO : Inserting TRINITY_DN36109_c1_g1_m.30960
17 Sep 2025 09:31:22,094 INFO : 98% Done
17 Sep 2025 09:31:22,101 DEBUG: Total peptides inserted: 1
17 Sep 2025 09:31:22,101 INFO : Done parsing Skyline document.
17 Sep 2025 09:31:22,519 INFO : Creating and populating temp tables for Proportion values
17 Sep 2025 09:31:22,524 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
17 Sep 2025 09:31:22,531 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
17 Sep 2025 09:31:22,537 INFO : Cleaning up temp tables
17 Sep 2025 09:31:22,788 INFO : Deleted temp copy of SKYD file
17 Sep 2025 09:31:22,788 INFO : Completed import of Skyline document from XA00305PRMPST.sky
17 Sep 2025 09:31:22,790 INFO : 100% Done
17 Sep 2025 09:31:23,021 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'