14 Oct 2020 20:14:57,010 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
14 Oct 2020 20:14:57,022 INFO : Starting to import Skyline document from 061918_iMRM_AllPhos_IMAC_CalCurve_JKedit_annotated2_jw2.sky.zip
14 Oct 2020 20:14:57,026 INFO : Expanding 061918_iMRM_AllPhos_IMAC_CalCurve_JKedit_annotated2_jw2.skyd
14 Oct 2020 20:14:57,090 INFO : Expanding 061918_iMRM_AllPhos_IMAC_CalCurve_JKedit_annotated2_jw2.sky.view
14 Oct 2020 20:14:57,116 INFO : Expanding 061918_iMRM_AllPhos_IMAC_CalCurve_JKedit_annotated2_jw2.sky
14 Oct 2020 20:14:57,158 WARN : The version of this Skyline document is 20.1. This is newer than the highest supported version 4.1
14 Oct 2020 20:14:57,165 INFO : 2% Done
14 Oct 2020 20:14:57,314 INFO : Inserting sp|O43524|FOXO3_HUMAN
14 Oct 2020 20:14:57,331 INFO : 3% Done
14 Oct 2020 20:14:57,395 INFO : 5% Done
14 Oct 2020 20:14:57,427 DEBUG: Total peptides inserted: 2
14 Oct 2020 20:14:57,433 INFO : 6% Done
14 Oct 2020 20:14:57,442 INFO : Inserting sp|P00533|EGFR_HUMAN
14 Oct 2020 20:14:57,450 INFO : 7% Done
14 Oct 2020 20:14:57,499 INFO : 9% Done
14 Oct 2020 20:14:57,547 INFO : 11% Done
14 Oct 2020 20:14:57,591 DEBUG: Total peptides inserted: 3
14 Oct 2020 20:14:57,601 INFO : Inserting sp|P00533|EGFR_HUMAN
14 Oct 2020 20:14:57,608 INFO : 14% Done
14 Oct 2020 20:14:57,652 DEBUG: Total peptides inserted: 1
14 Oct 2020 20:14:57,661 INFO : Inserting sp|P04049|RAF1_HUMAN
14 Oct 2020 20:14:57,668 INFO : 15% Done
14 Oct 2020 20:14:57,710 DEBUG: Total peptides inserted: 1
14 Oct 2020 20:14:57,716 INFO : 16% Done
14 Oct 2020 20:14:57,726 INFO : Inserting sp|P04626|ERBB2_HUMAN
14 Oct 2020 20:14:57,733 INFO : 17% Done
14 Oct 2020 20:14:57,768 INFO : 19% Done
14 Oct 2020 20:14:57,810 DEBUG: Total peptides inserted: 2
14 Oct 2020 20:14:57,819 INFO : Inserting sp|P10398|ARAF_HUMAN
14 Oct 2020 20:14:57,826 INFO : 21% Done
14 Oct 2020 20:14:57,865 INFO : 22% Done
14 Oct 2020 20:14:57,904 DEBUG: Total peptides inserted: 2
14 Oct 2020 20:14:57,909 INFO : 23% Done
14 Oct 2020 20:14:57,917 INFO : Inserting sp|P15056|BRAF_HUMAN
14 Oct 2020 20:14:57,924 INFO : 25% Done
14 Oct 2020 20:14:58,029 DEBUG: Total peptides inserted: 1
14 Oct 2020 20:14:58,039 INFO : Inserting sp|P15056|BRAF_HUMAN
14 Oct 2020 20:14:58,087 INFO : 27% Done
14 Oct 2020 20:14:58,156 DEBUG: Total peptides inserted: 2
14 Oct 2020 20:14:58,162 INFO : 28% Done
14 Oct 2020 20:14:58,172 INFO : Inserting sp|P27361|MK03_HUMAN
14 Oct 2020 20:14:58,180 INFO : 29% Done
14 Oct 2020 20:14:58,232 DEBUG: Total peptides inserted: 1
14 Oct 2020 20:14:58,242 INFO : Inserting sp|P27361|MK03_HUMAN
14 Oct 2020 20:14:58,251 INFO : 32% Done
14 Oct 2020 20:14:58,296 DEBUG: Total peptides inserted: 1
14 Oct 2020 20:14:58,307 INFO : Inserting sp|P27361|MK03_HUMAN
14 Oct 2020 20:14:58,315 INFO : 33% Done
14 Oct 2020 20:14:58,360 DEBUG: Total peptides inserted: 1
14 Oct 2020 20:14:58,365 INFO : 34% Done
14 Oct 2020 20:14:58,375 INFO : Inserting sp|P28482|MK01_HUMAN
14 Oct 2020 20:14:58,382 INFO : 36% Done
14 Oct 2020 20:14:58,423 DEBUG: Total peptides inserted: 1
14 Oct 2020 20:14:58,432 INFO : Inserting sp|P28482|MK01_HUMAN
14 Oct 2020 20:14:58,440 INFO : 37% Done
14 Oct 2020 20:14:58,495 DEBUG: Total peptides inserted: 1
14 Oct 2020 20:14:58,501 INFO : 38% Done
14 Oct 2020 20:14:58,512 INFO : Inserting sp|P28482|MK01_HUMAN
14 Oct 2020 20:14:58,519 INFO : 40% Done
14 Oct 2020 20:14:58,570 DEBUG: Total peptides inserted: 1
14 Oct 2020 20:14:58,581 INFO : Inserting sp|P31749|AKT1_HUMAN
14 Oct 2020 20:14:58,589 INFO : 41% Done
14 Oct 2020 20:14:58,622 DEBUG: Total peptides inserted: 1
14 Oct 2020 20:14:58,632 INFO : Inserting sp|P31749|AKT1_HUMAN
14 Oct 2020 20:14:58,640 INFO : 44% Done
14 Oct 2020 20:14:58,684 DEBUG: Total peptides inserted: 1
14 Oct 2020 20:14:58,694 INFO : Inserting sp|P31751|AKT2_HUMAN
14 Oct 2020 20:14:58,703 INFO : 47% Done
14 Oct 2020 20:14:58,784 INFO : 48% Done
14 Oct 2020 20:14:58,824 DEBUG: Total peptides inserted: 2
14 Oct 2020 20:14:58,830 INFO : 49% Done
14 Oct 2020 20:14:58,840 INFO : Inserting sp|P35222|CTNB1_HUMAN
14 Oct 2020 20:14:58,847 INFO : 51% Done
14 Oct 2020 20:14:58,891 INFO : 52% Done
14 Oct 2020 20:14:58,933 DEBUG: Total peptides inserted: 2
14 Oct 2020 20:14:58,942 INFO : Inserting sp|P40763|STAT3_HUMAN
14 Oct 2020 20:14:58,951 INFO : 54% Done
14 Oct 2020 20:14:58,996 DEBUG: Total peptides inserted: 1
14 Oct 2020 20:14:59,002 INFO : 55% Done
14 Oct 2020 20:14:59,012 INFO : Inserting sp|P40763|STAT3_HUMAN
14 Oct 2020 20:14:59,022 INFO : 58% Done
14 Oct 2020 20:14:59,189 DEBUG: Total peptides inserted: 1
14 Oct 2020 20:14:59,196 INFO : 59% Done
14 Oct 2020 20:14:59,208 INFO : Inserting sp|P42345|MTOR_HUMAN
14 Oct 2020 20:14:59,217 INFO : 60% Done
14 Oct 2020 20:14:59,274 INFO : 62% Done
14 Oct 2020 20:14:59,332 INFO : 64% Done
14 Oct 2020 20:14:59,377 INFO : 66% Done
14 Oct 2020 20:14:59,425 DEBUG: Total peptides inserted: 4
14 Oct 2020 20:14:59,435 INFO : Inserting sp|P45983|MK08_HUMAN
14 Oct 2020 20:14:59,443 INFO : 68% Done
14 Oct 2020 20:14:59,492 DEBUG: Total peptides inserted: 1
14 Oct 2020 20:14:59,501 INFO : Inserting sp|P45983|MK08_HUMAN
14 Oct 2020 20:14:59,509 INFO : 70% Done
14 Oct 2020 20:14:59,529 DEBUG: Total peptides inserted: 1
14 Oct 2020 20:14:59,533 INFO : Inserting sp|P45983|MK08_HUMAN
14 Oct 2020 20:14:59,537 INFO : 72% Done
14 Oct 2020 20:14:59,555 DEBUG: Total peptides inserted: 1
14 Oct 2020 20:14:59,559 INFO : Inserting sp|P49841|GSK3B_HUMAN
14 Oct 2020 20:14:59,562 INFO : 74% Done
14 Oct 2020 20:14:59,582 DEBUG: Total peptides inserted: 1
14 Oct 2020 20:14:59,586 INFO : Inserting sp|Q02750|MP2K1_HUMAN
14 Oct 2020 20:14:59,589 INFO : 75% Done
14 Oct 2020 20:14:59,605 DEBUG: Total peptides inserted: 1
14 Oct 2020 20:14:59,610 INFO : Inserting sp|Q12778|FOXO1_HUMAN
14 Oct 2020 20:14:59,613 INFO : 76% Done
14 Oct 2020 20:14:59,624 DEBUG: Total peptides inserted: 1
14 Oct 2020 20:14:59,627 INFO : 77% Done
14 Oct 2020 20:14:59,631 INFO : Inserting sp|Q15418|KS6A1_HUMAN
14 Oct 2020 20:14:59,634 INFO : 78% Done
14 Oct 2020 20:14:59,680 DEBUG: Total peptides inserted: 1
14 Oct 2020 20:14:59,685 INFO : Inserting sp|Q16539|MK14_HUMAN
14 Oct 2020 20:14:59,689 INFO : 81% Done
14 Oct 2020 20:14:59,709 DEBUG: Total peptides inserted: 1
14 Oct 2020 20:14:59,713 INFO : Inserting sp|Q16539|MK14_HUMAN
14 Oct 2020 20:14:59,716 INFO : 82% Done
14 Oct 2020 20:14:59,731 DEBUG: Total peptides inserted: 1
14 Oct 2020 20:14:59,735 INFO : Inserting sp|Q16539|MK14_HUMAN
14 Oct 2020 20:14:59,739 INFO : 85% Done
14 Oct 2020 20:14:59,756 DEBUG: Total peptides inserted: 1
14 Oct 2020 20:14:59,760 INFO : Inserting sp|Q96B36|AKTS1_HUMAN
14 Oct 2020 20:14:59,763 INFO : 86% Done
14 Oct 2020 20:14:59,778 DEBUG: Total peptides inserted: 1
14 Oct 2020 20:14:59,782 INFO : Inserting sp|Q9BY44|EIF2A_HUMAN
14 Oct 2020 20:14:59,785 INFO : 89% Done
14 Oct 2020 20:14:59,804 INFO : 90% Done
14 Oct 2020 20:14:59,820 DEBUG: Total peptides inserted: 2
14 Oct 2020 20:14:59,824 INFO : Inserting sp|Q9BY44|EIF2A_HUMAN
14 Oct 2020 20:14:59,828 INFO : 93% Done
14 Oct 2020 20:14:59,847 INFO : 94% Done
14 Oct 2020 20:14:59,864 DEBUG: Total peptides inserted: 2
14 Oct 2020 20:14:59,866 INFO : 95% Done
14 Oct 2020 20:14:59,870 INFO : Inserting sp|Q9Y243|AKT3_HUMAN
14 Oct 2020 20:14:59,873 INFO : 97% Done
14 Oct 2020 20:14:59,904 INFO : 98% Done
14 Oct 2020 20:14:59,922 DEBUG: Total peptides inserted: 2
14 Oct 2020 20:14:59,922 INFO : Done parsing Skyline document.
14 Oct 2020 20:15:10,550 INFO : Creating and populating temp tables for Proportion values
14 Oct 2020 20:15:10,583 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
14 Oct 2020 20:15:10,693 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
14 Oct 2020 20:15:10,724 INFO : Cleaning up temp tables
14 Oct 2020 20:15:11,209 INFO : Completed import of Skyline document from 061918_iMRM_AllPhos_IMAC_CalCurve_JKedit_annotated2_jw2.sky.zip
14 Oct 2020 20:15:11,265 INFO : 100% Done
14 Oct 2020 20:15:11,396 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'