Peptide Note/Annotations
sp|O14757|CHK1_HUMAN
VTSGGVSESPSGFSK
2772921504.64470  18.6622DDR2_chromatogram2.sky.zip
sp|O43561|LAT_HUMAN
EYVNVSQELHPGAAK
2182331720.78220  19.0346DDR2_chromatogram1.sky.zip
sp|O75417|DPOLQ_HUMAN
NTELNEEQEVISNLETK
167116881988.95380  22.2813DDR2_chromatogram1.sky.zip
sp|O96013|PAK4_HUMAN
RPLSGPDVGTPQPAGLASGAK
1771981975.04870  17.3651DDR2_chromatogram4.sky.zip
sp|O96013|PAK4_HUMAN
RPLSGPDVGTPQPAGLASGAK
1771982055.01500  18.9926DDR2_chromatogram1.sky.zip
sp|O96017|CHK2_HUMAN
ILGETSLMR
3733821114.50940  18.5402DDR2_chromatogram1.sky.zip
sp|O96017|CHK2_HUMAN
TLCGTPTYLAPEVLVSVGTAGYNR
3824062538.27880  27.4816DDR2_chromatogram2.sky.zip
sp|O96017|CHK2_HUMAN
TLCGTPTYLAPEVLVSVGTAGYNR
3824062618.24520  26.1515DDR2_chromatogram8_2021-06-21_13-22-59.sky.zip
sp|P04406|G3P_HUMAN
GALQNIIPASTGAAK
2002151410.78310  20.4342DDR2_chromatogram1.sky.zip
sp|P04637|P53_HUMAN
ALPNNTSSSPQPK
3063191419.63950  14.9108DDR2_chromatogram1.sky.zip
sp|P04637|P53_HUMAN
MEEPQSDPSVEPPLSQETFSDLWK
0242855.22490  25.4742DDR2_chromatogram1.sky.zip
sp|P06493|CDK1_HUMAN
VYTHEVVTLWYR
1581701564.80380  21.3152DDR2_chromatogram1.sky.zip
sp|P06493|CDK1_HUMAN
VYTHEVVTLWYR
1581701644.77010  23.1874DDR2_chromatogram1.sky.zip
sp|P07437|TBB5_HUMAN
ISVYYNEATGGK
46581300.62990  17.6994DDR2_chromatogram1.sky.zip
sp|P09874|PARP1_HUMAN
MAIMVQSPMFDGK
34471533.64310  22.6026DDR2_chromatogram8_2021-06-21_13-22-59.sky.zip
sp|P20700|LMNB1_HUMAN
AGGPTTPLSPTR
14261313.54180  16.9026DDR2_chromatogram1.sky.zip
sp|P20700|LMNB1_HUMAN
AGGPTTPLSPTR
14261233.57550  16.2985DDR2_chromatogram8_2021-06-21_13-22-59.sky.zip
sp|P20700|LMNB1_HUMAN
AGGPTTPLSPTR
14261233.57550  16.9240DDR2_chromatogram8_2021-06-21_13-22-59.sky.zip
sp|P30305|MPIP2_HUMAN
LLGHSPVLR
1551641070.56380  18.3435DDR2_chromatogram1.sky.zip
sp|P30305|MPIP2_HUMAN
SPSMPCSVIRPILK
3203341583.85280  20.6603DDR2_chromatogram1.sky.zip
sp|P30305|MPIP2_HUMAN
SPSMPCSVIRPILK
3203341663.81910  21.8113DDR2_chromatogram1.sky.zip
sp|P30307|MPIP3_HUMAN
SPSMPENLNRPR
2132251396.68810  15.9152Did not select the y10++ and b11++ transitions, b/c even though they have different light m/z values, they have the same heavy m/z values. Ditto for y10+++ and b11+++.DDR2_chromatogram5.sky.zip
sp|P42574|CASP3_HUMAN
IIHGSESMDSGISLDNSYK
19382131.91330  19.5797DDR2_chromatogram1.sky.zip
sp|P46013|KI67_HUMAN
DINTFLGTPVQK
179318051331.70850  23.6581DDR2_chromatogram2.sky.zip
sp|P46013|KI67_HUMAN
DINTFLGTPVQK
179318051411.67480  21.8263DDR2_chromatogram1.sky.zip
sp|P46013|KI67_HUMAN
NINTFVETPVQK
239824101468.69630  19.6888DDR2_chromatogram1.sky.zip
sp|P49959|MRE11_HUMAN
IMSQSQVSK
6736821006.51170  14.0230DDR2_chromatogram1.sky.zip
sp|P50613|CDK7_HUMAN
AYTHQVVTR
1671761153.52810  16.5051DDR2_chromatogram2.sky.zip
sp|P68133|ACTS_HUMAN
AVFPSIVGRPR
30411197.69820  19.5409DDR2_chromatogram1.sky.zip
sp|Q00987|MDM2_HUMAN
AISETEENSDELSGER
1631791844.73130  17.0903DDR2_chromatogram1.sky.zip
sp|Q02223|TNR17_HUMAN
SLPAALSATEIEK
1661791328.71870  20.4524DDR2_chromatogram1.sky.zip
sp|Q02223|TNR17_HUMAN
SLPAALSATEIEK
1661791408.68510  21.3343DDR2_chromatogram1.sky.zip
sp|Q12888|TP53B_HUMAN
IDEDGENTQIEDTEPMSPVLNSK
5355582560.14870  20.3582DDR2_chromatogram1.sky.zip
sp|Q12888|TP53B_HUMAN
IDEDGENTQIEDTEPMSPVLNSK
5355582640.11500  21.1472DDR2_chromatogram1.sky.zip
sp|Q12888|TP53B_HUMAN
IDEDGENTQIEDTEPMSPVLNSK
5355582640.11500  20.6208DDR2_chromatogram1.sky.zip
sp|Q12888|TP53B_HUMAN
IDEDGENTQIEDTEPMSPVLNSK
5355582720.08130  21.3123Cannot select y4+ and y12+++ b/c they have almost the same heavy m/z values, but different light m/z values. Ditto for y9-98++ and b13-98+++, and for b10+ and b21-98++. For y9++ and b5+, the heavy m/z values seemed different enough (~0.5 m/z) so that their peaks were quite different, so I'll keep those (also b/c y9++ is ranked #1).DDR2_chromatogram8_2021-06-21_13-22-59.sky.zip
sp|Q14566|MCM6_HUMAN
EIESEIDSEEELINK
7547691775.83130  22.6185DDR2_chromatogram2.sky.zip
sp|Q14566|MCM6_HUMAN
EIESEIDSEEELINK
7547691855.79760  22.7899DDR2_chromatogram2.sky.zip
sp|Q14980|NUMA1_HUMAN
LSQLEEHLSQLQDNPPQEK
3864052312.06860  19.9438DDR2_chromatogram1.sky.zip
sp|Q53HL2|BOREA_HUMAN
LTAEAIQTPLK
981091263.64760  19.0092DDR2_chromatogram1.sky.zip
sp|Q6IBW4|CNDH2_HUMAN
FVQETELSQR
4844941315.58090  17.1955DDR2_chromatogram1.sky.zip
sp|Q8NG31|CASC5_HUMAN
SLSNPTPDYCHDK
7647771612.62290  18.0068DDR2_chromatogram2.sky.zip
sp|Q8NG31|CASC5_HUMAN
SLSNPTPDYCHDK
7647771532.65660  15.4376DDR2_chromatogram1.sky.zip
sp|Q92541|RTF1_HUMAN
SASDLSEDLFK
6496601210.57170  21.0935DDR2_chromatogram1.sky.zip
sp|Q92541|RTF1_HUMAN
SASDLSEDLFK
6496601290.53810  21.9620DDR2_chromatogram1.sky.zip
sp|Q92878|RAD50_HUMAN
YELQQLEGSSDR
4614731503.62430  19.3307DDR2_chromatogram1.sky.zip
sp|Q96ER3|SAAL1_HUMAN
NGAAQPLDQPQEESEEQPVFR
2232442368.09310  19.3402DDR2_chromatogram1.sky.zip
sp|Q96ER3|SAAL1_HUMAN
NGAAQPLDQPQEESEEQPVFR
2232442448.05950  20.0545DDR2_chromatogram1.sky.zip
sp|Q99638|RAD9A_HUMAN
SPQGPSPVLAEDSEGEG
3743911654.73220  20.5404DDR2_chromatogram2.sky.zip
sp|Q99638|RAD9A_HUMAN
SPQGPSPVLAEDSEGEG
3743911734.69860  19.3243DDR2_chromatogram1.sky.zip
sp|Q9BVJ6|UT14A_HUMAN
DSGSQEVLSELR
4494611318.63650  20.2791DDR2_chromatogram1.sky.zip
sp|Q9BVJ6|UT14A_HUMAN
DSGSQEVLSELR
4494611398.60280  21.2869DDR2_chromatogram1.sky.zip