07 Apr 2021 18:03:59,036 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
07 Apr 2021 18:03:59,042 INFO : Starting to import Skyline document from DDR2_chromatogram1.sky.zip
07 Apr 2021 18:03:59,091 INFO : Expanding NCI56_CE_optim_Skyline_library_05312016.optdb
07 Apr 2021 18:03:59,092 INFO : Expanding Cons_all_FHCRC_Broad_Q3.blib
07 Apr 2021 18:03:59,094 INFO : Expanding DDR2_chromatogram1.skyd
07 Apr 2021 18:03:59,104 INFO : Expanding DDR2_chromatogram1.sky.view
07 Apr 2021 18:03:59,105 INFO : Expanding DDR2_chromatogram1.sky
07 Apr 2021 18:03:59,118 INFO : 2% Done
07 Apr 2021 18:03:59,159 DEBUG: Starting to load chromatogram headers
07 Apr 2021 18:03:59,160 DEBUG: Done loading chromatogram headers
07 Apr 2021 18:03:59,220 INFO : Inserting sp|O43561|LAT_HUMAN
07 Apr 2021 18:03:59,225 INFO : 3% Done
07 Apr 2021 18:03:59,252 DEBUG: Total peptides inserted: 1
07 Apr 2021 18:03:59,254 INFO : 4% Done
07 Apr 2021 18:03:59,257 INFO : Inserting sp|O75417|DPOLQ_HUMAN
07 Apr 2021 18:03:59,260 INFO : 6% Done
07 Apr 2021 18:03:59,272 DEBUG: Total peptides inserted: 1
07 Apr 2021 18:03:59,274 INFO : Inserting sp|O96013|PAK4_HUMAN
07 Apr 2021 18:03:59,278 INFO : 8% Done
07 Apr 2021 18:03:59,294 DEBUG: Total peptides inserted: 1
07 Apr 2021 18:03:59,297 INFO : Inserting sp|O96017|CHK2_HUMAN
07 Apr 2021 18:03:59,300 INFO : 10% Done
07 Apr 2021 18:03:59,314 DEBUG: Total peptides inserted: 1
07 Apr 2021 18:03:59,317 INFO : Inserting sp|P04406|G3P_HUMAN
07 Apr 2021 18:03:59,321 INFO : 12% Done
07 Apr 2021 18:03:59,339 DEBUG: Total peptides inserted: 1
07 Apr 2021 18:03:59,342 INFO : Inserting sp|P04637|P53_HUMAN
07 Apr 2021 18:03:59,346 INFO : 14% Done
07 Apr 2021 18:03:59,377 INFO : 16% Done
07 Apr 2021 18:03:59,400 DEBUG: Total peptides inserted: 2
07 Apr 2021 18:03:59,402 INFO : 17% Done
07 Apr 2021 18:03:59,407 INFO : Inserting sp|P06493|CDK1_HUMAN
07 Apr 2021 18:03:59,410 INFO : 18% Done
07 Apr 2021 18:03:59,435 INFO : 20% Done
07 Apr 2021 18:03:59,456 DEBUG: Total peptides inserted: 2
07 Apr 2021 18:03:59,459 INFO : Inserting sp|P07437|TBB5_HUMAN
07 Apr 2021 18:03:59,463 INFO : 22% Done
07 Apr 2021 18:03:59,477 DEBUG: Total peptides inserted: 1
07 Apr 2021 18:03:59,480 INFO : Inserting sp|P20700|LMNB1_HUMAN
07 Apr 2021 18:03:59,483 INFO : 24% Done
07 Apr 2021 18:03:59,497 DEBUG: Total peptides inserted: 1
07 Apr 2021 18:03:59,500 INFO : Inserting sp|P30305|MPIP2_HUMAN
07 Apr 2021 18:03:59,503 INFO : 26% Done
07 Apr 2021 18:03:59,520 INFO : 28% Done
07 Apr 2021 18:03:59,537 INFO : 30% Done
07 Apr 2021 18:03:59,550 DEBUG: Total peptides inserted: 3
07 Apr 2021 18:03:59,552 INFO : Inserting sp|P42574|CASP3_HUMAN
07 Apr 2021 18:03:59,556 INFO : 32% Done
07 Apr 2021 18:03:59,568 DEBUG: Total peptides inserted: 1
07 Apr 2021 18:03:59,570 INFO : 33% Done
07 Apr 2021 18:03:59,573 INFO : Inserting sp|P46013|KI67_HUMAN
07 Apr 2021 18:03:59,575 INFO : 34% Done
07 Apr 2021 18:03:59,591 INFO : 37% Done
07 Apr 2021 18:03:59,602 DEBUG: Total peptides inserted: 2
07 Apr 2021 18:03:59,605 INFO : Inserting sp|P49959|MRE11_HUMAN
07 Apr 2021 18:03:59,607 INFO : 38% Done
07 Apr 2021 18:03:59,618 DEBUG: Total peptides inserted: 1
07 Apr 2021 18:03:59,620 INFO : Inserting sp|P68133|ACTS_HUMAN
07 Apr 2021 18:03:59,622 INFO : 40% Done
07 Apr 2021 18:03:59,631 DEBUG: Total peptides inserted: 1
07 Apr 2021 18:03:59,632 INFO : 41% Done
07 Apr 2021 18:03:59,634 INFO : Inserting sp|Q00987|MDM2_HUMAN
07 Apr 2021 18:03:59,636 INFO : 42% Done
07 Apr 2021 18:03:59,648 DEBUG: Total peptides inserted: 1
07 Apr 2021 18:03:59,651 INFO : Inserting sp|Q02223|TNR17_HUMAN
07 Apr 2021 18:03:59,653 INFO : 44% Done
07 Apr 2021 18:03:59,666 INFO : 46% Done
07 Apr 2021 18:03:59,676 DEBUG: Total peptides inserted: 2
07 Apr 2021 18:03:59,679 INFO : Inserting sp|Q12888|TP53B_HUMAN
07 Apr 2021 18:03:59,681 INFO : 49% Done
07 Apr 2021 18:03:59,692 INFO : 50% Done
07 Apr 2021 18:03:59,706 INFO : 52% Done
07 Apr 2021 18:03:59,717 DEBUG: Total peptides inserted: 3
07 Apr 2021 18:03:59,718 INFO : 53% Done
07 Apr 2021 18:03:59,720 INFO : Inserting sp|Q14566|MCM6_HUMAN
07 Apr 2021 18:03:59,723 INFO : 54% Done
07 Apr 2021 18:03:59,736 DEBUG: Total peptides inserted: 1
07 Apr 2021 18:03:59,737 INFO : 55% Done
07 Apr 2021 18:03:59,740 INFO : Inserting sp|Q14980|NUMA1_HUMAN
07 Apr 2021 18:03:59,742 INFO : 58% Done
07 Apr 2021 18:03:59,754 DEBUG: Total peptides inserted: 1
07 Apr 2021 18:03:59,756 INFO : Inserting sp|Q53HL2|BOREA_HUMAN
07 Apr 2021 18:03:59,759 INFO : 59% Done
07 Apr 2021 18:03:59,770 DEBUG: Total peptides inserted: 1
07 Apr 2021 18:03:59,772 INFO : 60% Done
07 Apr 2021 18:03:59,774 INFO : Inserting sp|Q6IBW4|CNDH2_HUMAN
07 Apr 2021 18:03:59,776 INFO : 62% Done
07 Apr 2021 18:03:59,787 DEBUG: Total peptides inserted: 1
07 Apr 2021 18:03:59,790 INFO : Inserting sp|Q8NG31|CASC5_HUMAN
07 Apr 2021 18:03:59,792 INFO : 64% Done
07 Apr 2021 18:03:59,802 DEBUG: Total peptides inserted: 1
07 Apr 2021 18:03:59,804 INFO : Inserting sp|Q92541|RTF1_HUMAN
07 Apr 2021 18:03:59,807 INFO : 66% Done
07 Apr 2021 18:03:59,819 INFO : 68% Done
07 Apr 2021 18:03:59,829 DEBUG: Total peptides inserted: 2
07 Apr 2021 18:03:59,831 INFO : Inserting sp|Q92878|RAD50_HUMAN
07 Apr 2021 18:03:59,833 INFO : 70% Done
07 Apr 2021 18:03:59,843 DEBUG: Total peptides inserted: 1
07 Apr 2021 18:03:59,845 INFO : Inserting sp|Q96ER3|SAAL1_HUMAN
07 Apr 2021 18:03:59,847 INFO : 72% Done
07 Apr 2021 18:03:59,859 INFO : 74% Done
07 Apr 2021 18:03:59,870 DEBUG: Total peptides inserted: 2
07 Apr 2021 18:03:59,871 INFO : Inserting sp|Q99638|RAD9A_HUMAN
07 Apr 2021 18:03:59,874 INFO : 76% Done
07 Apr 2021 18:03:59,884 DEBUG: Total peptides inserted: 1
07 Apr 2021 18:03:59,886 INFO : Inserting sp|Q9BVJ6|UT14A_HUMAN
07 Apr 2021 18:03:59,888 INFO : 78% Done
07 Apr 2021 18:03:59,902 INFO : 80% Done
07 Apr 2021 18:03:59,912 DEBUG: Total peptides inserted: 2
07 Apr 2021 18:03:59,913 INFO : Done parsing Skyline document.
07 Apr 2021 18:04:06,147 INFO : No group comparisons found.
07 Apr 2021 18:04:06,147 INFO : Calculating calibration curves
07 Apr 2021 18:04:06,148 DEBUG: Calculating calibration curve for sp|O43561|LAT_HUMAN, 1 of 27
07 Apr 2021 18:04:06,174 INFO : 81% Done
07 Apr 2021 18:04:06,174 DEBUG: Calculating calibration curve for sp|O75417|DPOLQ_HUMAN, 2 of 27
07 Apr 2021 18:04:06,194 DEBUG: Calculating calibration curve for sp|O96013|PAK4_HUMAN, 3 of 27
07 Apr 2021 18:04:06,213 INFO : 82% Done
07 Apr 2021 18:04:06,213 DEBUG: Calculating calibration curve for sp|O96017|CHK2_HUMAN, 4 of 27
07 Apr 2021 18:04:06,230 INFO : 83% Done
07 Apr 2021 18:04:06,230 DEBUG: Calculating calibration curve for sp|P04406|G3P_HUMAN, 5 of 27
07 Apr 2021 18:04:06,250 DEBUG: Calculating calibration curve for sp|P04637|P53_HUMAN, 6 of 27
07 Apr 2021 18:04:06,293 INFO : 84% Done
07 Apr 2021 18:04:06,293 DEBUG: Calculating calibration curve for sp|P06493|CDK1_HUMAN, 7 of 27
07 Apr 2021 18:04:06,327 INFO : 85% Done
07 Apr 2021 18:04:06,327 DEBUG: Calculating calibration curve for sp|P07437|TBB5_HUMAN, 8 of 27
07 Apr 2021 18:04:06,340 DEBUG: Calculating calibration curve for sp|P20700|LMNB1_HUMAN, 9 of 27
07 Apr 2021 18:04:06,355 INFO : 86% Done
07 Apr 2021 18:04:06,355 DEBUG: Calculating calibration curve for sp|P30305|MPIP2_HUMAN, 10 of 27
07 Apr 2021 18:04:06,394 INFO : 87% Done
07 Apr 2021 18:04:06,394 DEBUG: Calculating calibration curve for sp|P42574|CASP3_HUMAN, 11 of 27
07 Apr 2021 18:04:06,406 DEBUG: Calculating calibration curve for sp|P46013|KI67_HUMAN, 12 of 27
07 Apr 2021 18:04:06,430 INFO : 88% Done
07 Apr 2021 18:04:06,430 DEBUG: Calculating calibration curve for sp|P49959|MRE11_HUMAN, 13 of 27
07 Apr 2021 18:04:06,443 INFO : 89% Done
07 Apr 2021 18:04:06,443 DEBUG: Calculating calibration curve for sp|P68133|ACTS_HUMAN, 14 of 27
07 Apr 2021 18:04:06,452 DEBUG: Calculating calibration curve for sp|Q00987|MDM2_HUMAN, 15 of 27
07 Apr 2021 18:04:06,465 INFO : 90% Done
07 Apr 2021 18:04:06,465 DEBUG: Calculating calibration curve for sp|Q02223|TNR17_HUMAN, 16 of 27
07 Apr 2021 18:04:06,487 INFO : 91% Done
07 Apr 2021 18:04:06,488 DEBUG: Calculating calibration curve for sp|Q12888|TP53B_HUMAN, 17 of 27
07 Apr 2021 18:04:06,516 DEBUG: Calculating calibration curve for sp|Q14566|MCM6_HUMAN, 18 of 27
07 Apr 2021 18:04:06,529 INFO : 92% Done
07 Apr 2021 18:04:06,529 DEBUG: Calculating calibration curve for sp|Q14980|NUMA1_HUMAN, 19 of 27
07 Apr 2021 18:04:06,541 INFO : 93% Done
07 Apr 2021 18:04:06,541 DEBUG: Calculating calibration curve for sp|Q53HL2|BOREA_HUMAN, 20 of 27
07 Apr 2021 18:04:06,554 DEBUG: Calculating calibration curve for sp|Q6IBW4|CNDH2_HUMAN, 21 of 27
07 Apr 2021 18:04:06,578 INFO : 94% Done
07 Apr 2021 18:04:06,578 DEBUG: Calculating calibration curve for sp|Q8NG31|CASC5_HUMAN, 22 of 27
07 Apr 2021 18:04:06,599 INFO : 95% Done
07 Apr 2021 18:04:06,599 DEBUG: Calculating calibration curve for sp|Q92541|RTF1_HUMAN, 23 of 27
07 Apr 2021 18:04:06,631 DEBUG: Calculating calibration curve for sp|Q92878|RAD50_HUMAN, 24 of 27
07 Apr 2021 18:04:06,647 INFO : 96% Done
07 Apr 2021 18:04:06,647 DEBUG: Calculating calibration curve for sp|Q96ER3|SAAL1_HUMAN, 25 of 27
07 Apr 2021 18:04:06,675 INFO : 97% Done
07 Apr 2021 18:04:17,158 DEBUG: Calculating calibration curve for sp|Q99638|RAD9A_HUMAN, 26 of 27
07 Apr 2021 18:04:17,186 DEBUG: Calculating calibration curve for sp|Q9BVJ6|UT14A_HUMAN, 27 of 27
07 Apr 2021 18:04:17,228 INFO : 98% Done
07 Apr 2021 18:04:17,240 INFO : Done calculating calibration curves.
07 Apr 2021 18:04:17,242 INFO : Creating and populating temp tables for Proportion values
07 Apr 2021 18:04:17,256 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
07 Apr 2021 18:04:17,284 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
07 Apr 2021 18:04:17,292 INFO : Cleaning up temp tables
07 Apr 2021 18:04:17,718 INFO : Completed import of Skyline document from DDR2_chromatogram1.sky.zip
07 Apr 2021 18:04:17,723 INFO : 100% Done
07 Apr 2021 18:04:17,777 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'