GO_Broad_group1_repeat_endo_minimized_2014-06-24_10-22-01.sky.zip

ValidationSamples
 
37 proteins, 41 peptides, 82 precursors, 246 transitions  -  55 replicates  -  Skyline-daily (64-bit) 2.5.1.6347
Protein Note/Annotations
 
ACOT7.IPI00010415IPI:IPI00010415.2|SWISS-PROT:O00154-1|ENSEMBL:ENSP00000367086|REFSEQ:NP_863654|VEGA:OTTHUMP00000001410 Tax_Id=9606 Gene_Symbol=ACOT7 Isoform 1 of Cytosolic acyl coenzyme A thioester hydrolase
Peptide Note/Annotations
Precursor Note/Annotations
VLEVPPVVYSR
01256.7129 
VLEVPPVVYSR
light2+629.36371256.7129331.0518100.0000
VLEVPPVVYSR
01256.7129 
VLEVPPVVYSR
heavy2+634.36781266.7211331.0518100.0000
ACSL1.IPI00012728IPI:IPI00012728.1|SWISS-PROT:P33121-1|TREMBL:A8K9T3;B7Z452|ENSEMBL:ENSP00000281455|REFSEQ:NP_001986|H-INV:HIT000053393 Tax_Id=9606 Gene_Symbol=ACSL1 Isoform 1 of Long-chain-fatty-acid--CoA ligase 1
Peptide Note/Annotations
Precursor Note/Annotations
IGFFQGDIR
01051.5451 
IGFFQGDIR
light2+526.77981051.5451325.6354100.0000
IGFFQGDIR
01051.5451 
IGFFQGDIR
heavy2+531.78401061.5533325.6354100.0000
VLQPTVFPVVPR
01350.8024 
VLQPTVFPVVPR
light2+676.40851350.8024333.5358100.0000
VLQPTVFPVVPR
01350.8024 
VLQPTVFPVVPR
heavy2+681.41261360.8106333.5358100.0000
AIP.IPI00925804IPI:IPI00925804.1|TREMBL:A5JGZ4 Tax_Id=9606 Gene_Symbol=AIP Non-functional aryl hydrocarbon receptor interacting protein (Fragment)
Peptide Note/Annotations
Precursor Note/Annotations
VLELDPALAPVVSR
01477.8504 
VLELDPALAPVVSR
light2+739.93251477.8504336.8898100.0000
VLELDPALAPVVSR
01477.8504 
VLELDPALAPVVSR
heavy2+744.93661487.8587336.8898100.0000
ALDH9A1.IPI00479877IPI:IPI00479877.4|SWISS-PROT:P49189|TREMBL:B4DE91;B4DX14;B4DXY7;B4DYY1;B9EKV4|ENSEMBL:ENSP00000346827|REFSEQ:NP_000687|H-INV:HIT000304494|VEGA:OTTHUMP00000032604 Tax_Id=9606 Gene_Symbol=ALDH9A1 aldehyde dehydrogenase 9A1
Peptide Note/Annotations
Precursor Note/Annotations
IGDPLLEDTR
01127.5823 
IGDPLLEDTR
light2+564.79841127.5823327.6428100.0000
IGDPLLEDTR
01127.5823 
IGDPLLEDTR
heavy2+569.80251137.5905327.6428100.0000
BAG3.IPI00641582IPI:IPI00641582.1|SWISS-PROT:O95817|TREMBL:Q53GY1|ENSEMBL:ENSP00000358081|REFSEQ:NP_004272|H-INV:HIT000032821|VEGA:OTTHUMP00000020599 Tax_Id=9606 Gene_Symbol=BAG3 BAG family molecular chaperone regulator 3
Peptide Note/Annotations
Precursor Note/Annotations
AAPSTAPAEATPPKPGEAEAPPK
02184.1063 
AAPSTAPAEATPPKPGEAEAPPK
light3+729.04272184.1063331.3767100.0000
AAPSTAPAEATPPKPGEAEAPPK
02184.1063 
AAPSTAPAEATPPKPGEAEAPPK
heavy3+731.71412192.1205331.3767100.0000
CALD1.IPI00014516IPI:IPI00014516.1|SWISS-PROT:Q05682-1|ENSEMBL:ENSP00000354826|REFSEQ:NP_149129|H-INV:HIT000196520|VEGA:OTTHUMP00000207952 Tax_Id=9606 Gene_Symbol=CALD1 Isoform 1 of Caldesmon
Peptide Note/Annotations
Precursor Note/Annotations
LEQYTSAIEGTK
01338.6667 
LEQYTSAIEGTK
light2+670.34061338.6667333.2154100.0000
LEQYTSAIEGTK
01338.6667 
LEQYTSAIEGTK
heavy2+674.34771346.6809333.2154100.0000
GNVFSSPTAAGTPNK
01446.7103 
GNVFSSPTAAGTPNK
light2+724.36241446.7103336.0677100.0000
GNVFSSPTAAGTPNK
01446.7103 
GNVFSSPTAAGTPNK
heavy2+728.36951454.7245336.0677100.0000
CAPG.IPI00027341IPI:IPI00027341.1|SWISS-PROT:P40121|ENSEMBL:ENSP00000391923;ENSP00000398232;ENSP00000403330|VEGA:OTTHUMP00000203060;OTTHUMP00000203061;OTTHUMP00000203063 Tax_Id=9606 Gene_Symbol=CAPG Macrophage-capping protein
Peptide Note/Annotations
Precursor Note/Annotations
EGNPEEDLTADK
01316.5732 
EGNPEEDLTADK
light2+659.29391316.5732332.6321100.0000
EGNPEEDLTADK
01316.5732 
EGNPEEDLTADK
heavy2+663.30101324.5874332.6321100.0000
CDKN2A.IPI00001560IPI:IPI00001560.2|SWISS-PROT:P42771-2|TREMBL:A5X2G7;A7LNE7|ENSEMBL:ENSP00000394932;ENSP00000418915|H-INV:HIT000218823 Tax_Id=9606 Gene_Symbol=CDKN2A Cyclin-dependent kinase inhibitor
Peptide Note/Annotations
Precursor Note/Annotations
ALLEAGALPNAPNSYGR
01712.8846 
ALLEAGALPNAPNSYGR
light2+857.44961712.8846343.0947100.0000
ALLEAGALPNAPNSYGR
01712.8846 
ALLEAGALPNAPNSYGR
heavy2+862.45371722.8929343.0947100.0000
CSDA.IPI00031801IPI:IPI00031801.4|SWISS-PROT:P16989-1|ENSEMBL:ENSP00000228251|REFSEQ:NP_003642|H-INV:HIT000037186|VEGA:OTTHUMP00000166640 Tax_Id=9606 Gene_Symbol=CSDA Isoform 1 of DNA-binding protein A
Peptide Note/Annotations
Precursor Note/Annotations
GAEAANVTGPDGVPVEGSR
01781.8544 
GAEAANVTGPDGVPVEGSR
light2+891.93451781.8544344.9155100.0000
GAEAANVTGPDGVPVEGSR
01781.8544 
GAEAANVTGPDGVPVEGSR
heavy2+896.93861791.8627344.9155100.0000
CTTN.IPI00029601IPI:IPI00029601.6|SWISS-PROT:Q14247|TREMBL:Q53HG7;Q76MU0|ENSEMBL:ENSP00000301843|REFSEQ:NP_005222|H-INV:HIT000197014|VEGA:OTTHUMP00000165962 Tax_Id=9606 Gene_Symbol=CTTN Src substrate cortactin
Peptide Note/Annotations
Precursor Note/Annotations
TQTPPVSPAPQPTEER
01733.8584 
TQTPPVSPAPQPTEER
light2+867.93651733.8584343.6484100.0000
TQTPPVSPAPQPTEER
01733.8584 
TQTPPVSPAPQPTEER
heavy2+872.94061743.8667343.6484100.0000