01 Nov 2013 08:02:47,751 INFO : Starting to import Skyline document from ABRF_sPRG_2013_HCD_UNC_2013-11-01_10-30-09.zip

01 Nov 2013 08:02:47,751 INFO : Expanding ABRF_sPRG_HCD.blib

01 Nov 2013 08:02:47,848 INFO : Expanding ABRF_sPRG_HCD.redundant.blib

01 Nov 2013 08:02:47,848 INFO : Expanding ABRF_sPRG_2013_HCD_UNC.skyd

01 Nov 2013 08:02:51,373 ERROR: Skyline document import failed
java.io.EOFException: Unexpected end of ZLIB input stream
	at java.util.zip.InflaterInputStream.fill(InflaterInputStream.java:240)
	at java.util.zip.InflaterInputStream.read(InflaterInputStream.java:158)
	at java.util.zip.ZipInputStream.read(ZipInputStream.java:193)
	at java.io.BufferedInputStream.read1(BufferedInputStream.java:273)
	at java.io.BufferedInputStream.read(BufferedInputStream.java:334)
	at java.io.FilterInputStream.read(FilterInputStream.java:107)
	at org.labkey.api.util.FileUtil.copyData(FileUtil.java:635)
	at org.labkey.api.writer.ZipUtil.unzipToDirectory(ZipUtil.java:143)
	at org.labkey.api.writer.ZipUtil.unzipToDirectory(ZipUtil.java:64)
	at org.labkey.targetedms.SkylineDocImporter.importSkylineDoc(SkylineDocImporter.java:180)
	at org.labkey.targetedms.SkylineDocImporter.importRun(SkylineDocImporter.java:137)
	at org.labkey.targetedms.pipeline.TargetedMSImportPipelineJob.run(TargetedMSImportPipelineJob.java:81)
	at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:471)
	at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:334)
	at java.util.concurrent.FutureTask.run(FutureTask.java:166)
	at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.access$201(ScheduledThreadPoolExecutor.java:178)
	at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:292)
	at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
	at java.lang.Thread.run(Thread.java:724)

01 Nov 2013 08:02:51,443 ERROR: Skyline document import failed
java.io.EOFException: Unexpected end of ZLIB input stream
	at java.util.zip.InflaterInputStream.fill(InflaterInputStream.java:240)
	at java.util.zip.InflaterInputStream.read(InflaterInputStream.java:158)
	at java.util.zip.ZipInputStream.read(ZipInputStream.java:193)
	at java.io.BufferedInputStream.read1(BufferedInputStream.java:273)
	at java.io.BufferedInputStream.read(BufferedInputStream.java:334)
	at java.io.FilterInputStream.read(FilterInputStream.java:107)
	at org.labkey.api.util.FileUtil.copyData(FileUtil.java:635)
	at org.labkey.api.writer.ZipUtil.unzipToDirectory(ZipUtil.java:143)
	at org.labkey.api.writer.ZipUtil.unzipToDirectory(ZipUtil.java:64)
	at org.labkey.targetedms.SkylineDocImporter.importSkylineDoc(SkylineDocImporter.java:180)
	at org.labkey.targetedms.SkylineDocImporter.importRun(SkylineDocImporter.java:137)
	at org.labkey.targetedms.pipeline.TargetedMSImportPipelineJob.run(TargetedMSImportPipelineJob.java:81)
	at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:471)
	at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:334)
	at java.util.concurrent.FutureTask.run(FutureTask.java:166)
	at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.access$201(ScheduledThreadPoolExecutor.java:178)
	at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:292)
	at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
	at java.lang.Thread.run(Thread.java:724)